Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00160 ATGGCTCCTCCGCCGGTGGAGCAAGGCGGAGAGTCAGCGGCTGTGGAAAAGGCGATACCGACGCCGTTTTTGACGAAAACCTATCAGCTCGTCGACGATAATGAAATCAACGATGTGATTTCGTGGAACGAGGATGGATCGACGTTCATCGTGTGGAATCCTACCGTTTTTGCCAGAGATTTGCTTCCGAATTATTTTAAGCATAACAATTTCTCAAGCTTTGTTCGGCAGTTGAACACCTATGGATTTAAGAAGGTAGTGCCGGATCGTTGGGAATTCTCTAACGATAGCTTTCGAAAAGGTGAGAAACGACTTTTGGGCGAGATTCAGCGCCGTAAAATCTCGATTTCAGCGGCGACAACTACAGCCGTTGCGGCAATTCCGACGGCAGTAACGGTAGCGGAAATCCCGTCGGAGACGCAAAAAATATCTCCGACGAATTCGTCTGAAGAACAGCTTTTCTCATTAAATGCATCGGCAACGAAAGCTCCAGCTGAGCTGATCGATGAGAACGAGAGGCTGAGGAAGGAGAATTCTCAGCTGATGAAAGAATTATCTGAAATGAAATCACTTTGCAACAATATCTTCAATTTGATGTCTAACTACGCGAATACCAAATCGGAGAGCAGTTTCCCGGCAAATGAGAACGCTTTACCGGTTACGAAGCCGCTTGATCTCTTACCTGTGAAGCGGTTAATCAGCGAGGCAAAGACGGATACGTCGGTGGAGGAGACAAGTTCGAGTCCGACTCCGGGTTCAGGCGGGATTCCGAACCTAAGCCCGAGCCTAACTCCGTGCCCCAGGCTATTTGGTGTGTTAATCGGTGCAAAGCGAGGTAGGGAATTTAGTCAAAGGCGCTCTACTTCATCGGAAGGCGAGACTCTCCTGCAACTTCAACAGCCCGAAGGTTCCGAGATCAAATCAGAACCGTTTGATTTCGGAGATAATCAGGAGACACCTTGGCTTAAGCAGGGTCACCGAACGAATCAGAGGGTGTGTAATTGA 1005 48.46 MAPPPVEQGGESAAVEKAIPTPFLTKTYQLVDDNEINDVISWNEDGSTFIVWNPTVFARDLLPNYFKHNNFSSFVRQLNTYGFKKVVPDRWEFSNDSFRKGEKRLLGEIQRRKISISAATTTAVAAIPTAVTVAEIPSETQKISPTNSSEEQLFSLNASATKAPAELIDENERLRKENSQLMKELSEMKSLCNNIFNLMSNYANTKSESSFPANENALPVTKPLDLLPVKRLISEAKTDTSVEETSSSPTPGSGGIPNLSPSLTPCPRLFGVLIGAKRGREFSQRRSTSSEGETLLQLQQPEGSEIKSEPFDFGDNQETPWLKQGHRTNQRVCN 334
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 1640142 1641231 - BLOR06554 Blo15g00160 70560

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00160 334 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 11 318 IPR027725 -
Blo15g00160 334 MobiDBLite consensus disorder prediction 235 262 - -
Blo15g00160 334 MobiDBLite consensus disorder prediction 281 334 - -
Blo15g00160 334 SMART hsfneu3 19 112 IPR000232 GO:0003700|GO:0006355|GO:0043565
Blo15g00160 334 ProSitePatterns HSF-type DNA-binding domain signature. 62 86 IPR000232 GO:0003700|GO:0006355|GO:0043565
Blo15g00160 334 Coils Coil 171 191 - -
Blo15g00160 334 PANTHER HEAT STRESS TRANSCRIPTION FACTOR B-2A 11 318 - -
Blo15g00160 334 MobiDBLite consensus disorder prediction 239 260 - -
Blo15g00160 334 Gene3D - 16 113 IPR036388 -
Blo15g00160 334 PRINTS Heat shock factor (HSF) domain signature 74 86 IPR000232 GO:0003700|GO:0006355|GO:0043565
Blo15g00160 334 PRINTS Heat shock factor (HSF) domain signature 23 46 IPR000232 GO:0003700|GO:0006355|GO:0043565
Blo15g00160 334 PRINTS Heat shock factor (HSF) domain signature 61 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Blo15g00160 334 Pfam HSF-type DNA-binding 23 112 IPR000232 GO:0003700|GO:0006355|GO:0043565
Blo15g00160 334 SUPERFAMILY Winged helix DNA-binding domain 20 112 IPR036390 -
Blo15g00160 334 MobiDBLite consensus disorder prediction 288 304 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00160 K09419 HSFF; heat shock transcription factor, other eukaryote - mnt:21398843 360.147
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g01100 Blo-Chr2:41938089 Blo15g00160 Blo-Chr15:1640142 1.18E-90 dispersed
Blo05g00644 Blo-Chr5:20337608 Blo15g00160 Blo-Chr15:1640142 6.00E-51 dispersed
Blo12g00576 Blo-Chr12:24012925 Blo15g00160 Blo-Chr15:1640142 1.02E-56 dispersed
Blo15g00160 Blo-Chr15:1640142 Blo05g00378 Blo-Chr5:4528404 1.59E-39 dispersed
Blo15g00160 Blo-Chr15:1640142 Blo12g00960 Blo-Chr12:27732009 9.14E-50 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g620 . Blo15g00160 . . . Bpe07g00947 . . Cmo16g00141 Cmo18g01259 . Cma15g01203 . Car15g01090 Sed01g3914 . Cpe14g00115 Bhi01g01343 Tan01g0269 Cmetu06g2712 Lac11g2126 Hepe07g0173 Mch10g0169 . Cla01g00293 Cam01g0304 Cec01g0295 Cco01g0311 Clacu01g0304 Cmu01g0289 . . . . . . Csa05g00316 Chy09g01192 Cme06g00981 . . Bda06g00674 . . . . Bma12g01125 . . Cmo15g01268 Cma16g00136 Cma18g01236 Car16g00120 Car18g01140 Cpe09g00100 Cpe13g00172 Bhi12g00210 . . Lac11g2126 Hepe06g1576 . Lcy12g1687 . . . . . . . . Csa03g01695 Chy06g00930 Cme09g01727
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Blo18g00282 . 17 245 HSF AT4G17750 52.1 7.8e-58 221.9
Blo05g00378 . 38 238 HSF AT4G17750 54.2 1.2e-55 214.5
Blo17g00285 . 39 225 HSF AT4G17750 53.7 8.1e-55 211.8
Blo02g00237 . 9 207 HSF AT4G17750 52.7 2.0e-53 207.2
Blo01g01525 . 17 115 HSF AT4G17750 71.7 4.0e-38 156.4
Blo12g00960 BCT,CCT 734 832 HSF AT4G17750 69.7 2.6e-37 153.7
Blo02g01100 . 30 125 HSF AT4G17750 70.8 9.9e-37 151.8
Blo02g00983 . 35 271 HSF AT5G16820 64.7 4.0e-67 252.7
Blo05g00378 . 37 244 HSF AT5G16820 53.5 1.4e-56 217.6
Blo18g00282 . 40 226 HSF AT5G16820 55.8 5.1e-54 209.1
Blo02g00237 . 11 206 HSF AT5G16820 53.1 1.6e-52 204.1
Blo18g00282 . 25 226 HSF AT1G32330 52.2 6.0e-55 212.2
Blo02g00237 . 3 189 HSF AT1G32330 50.7 3.2e-48 189.9
Blo01g01525 . 15 114 HSF AT1G32330 70.0 2.0e-37 154.1
Blo12g00960 BCT,CCT 732 831 HSF AT1G32330 68.0 1.3e-36 151.4
Blo18g00282 . 40 228 HSF AT3G02990 55.4 1.2e-55 214.5
Blo02g00237 . 11 209 HSF AT3G02990 52.9 5.5e-53 205.7
Blo01g01525 . 5 130 HSF AT3G02990 58.9 2.5e-37 153.7
Blo17g00285 . 30 246 HSF AT2G26150 58.3 3.9e-72 268.9
Blo11g00264 BCT 7 382 HSF AT4G18880 50.6 3.1e-89 325.9
Blo01g01525 . 14 129 HSF AT4G18880 62.1 1.8e-36 150.6
Blo02g00237 . 5 475 HSF AT4G13980 55.1 1.5e-127 453.4
Blo18g00282 . 26 254 HSF AT3G22830 56.0 4.4e-67 252.3
Blo17g00285 . 30 232 HSF AT3G22830 53.3 9.0e-60 228.0
Blo05g00378 . 26 314 HSF AT3G51910 51.6 4.2e-69 258.5
Blo16g00980 BCT 167 373 HSF AT5G54070 51.0 1.4e-50 197.2
Blo15g00160 . 14 120 HSF AT4G36990 63.6 4.0e-38 155.6
Blo12g00576 . 13 112 HSF AT4G36990 65.0 1.7e-36 150.2
Blo02g01100 . 26 326 HSF AT4G11660 52.3 7.2e-80 294.7
Blo01g01525 . 13 116 HSF AT4G11660 75.0 1.7e-44 177.2
Blo12g00960 BCT,CCT 730 833 HSF AT4G11660 71.2 1.6e-42 170.6
Blo12g00576 . 13 111 HSF AT4G11660 70.7 4.0e-38 156.0
Blo12g00576 . 18 212 HSF AT2G41690 54.6 4.9e-45 178.3
Blo01g01525 . 16 340 HSF AT1G46264 56.8 3.8e-91 332.0
Blo12g00960 BCT,CCT 733 1057 HSF AT1G46264 54.6 2.3e-88 322.8
Blo15g00160 . 17 115 HSF AT1G46264 72.7 4.7e-41 165.6
Blo12g00576 . 15 112 HSF AT1G46264 69.4 2.8e-38 156.4
Blo02g00237 . 5 102 HSF AT1G46264 70.4 8.3e-38 154.8
Blo05g00378 . 20 140 HSF AT1G46264 61.2 1.2e-36 151.0
Blo16g01032 . 6 179 HSF AT3G24520 64.4 3.6e-59 225.7
Blo01g00509 CCT 1 163 HSF AT3G24520 69.9 3.7e-56 215.7
Blo08g00287 CCT 6 175 HSF AT3G24520 57.1 8.1e-51 198.0
Blo18g00282 . 17 245 HSF AT4G17750 52.1 7.8e-58 221.9
Blo05g00378 . 38 238 HSF AT4G17750 54.2 1.2e-55 214.5
Blo17g00285 . 39 225 HSF AT4G17750 53.7 8.1e-55 211.8
Blo02g00237 . 9 207 HSF AT4G17750 52.7 2.0e-53 207.2
Blo01g01525 . 17 115 HSF AT4G17750 71.7 4.0e-38 156.4
Blo12g00960 BCT,CCT 734 832 HSF AT4G17750 69.7 2.6e-37 153.7
Blo02g01100 . 30 125 HSF AT4G17750 70.8 9.9e-37 151.8
Blo02g00983 . 35 271 HSF AT5G16820 64.7 4.0e-67 252.7
Blo05g00378 . 37 244 HSF AT5G16820 53.5 1.4e-56 217.6
Blo18g00282 . 40 226 HSF AT5G16820 55.8 5.1e-54 209.1
Blo02g00237 . 11 206 HSF AT5G16820 53.1 1.6e-52 204.1
Blo18g00282 . 25 226 HSF AT1G32330 52.2 6.0e-55 212.2
Blo02g00237 . 3 189 HSF AT1G32330 50.7 3.2e-48 189.9
Blo01g01525 . 15 114 HSF AT1G32330 70.0 2.0e-37 154.1
Blo12g00960 BCT,CCT 732 831 HSF AT1G32330 68.0 1.3e-36 151.4
Blo18g00282 . 40 228 HSF AT3G02990 55.4 1.2e-55 214.5
Blo02g00237 . 11 209 HSF AT3G02990 52.9 5.5e-53 205.7
Blo01g01525 . 5 130 HSF AT3G02990 58.9 2.5e-37 153.7
Blo17g00285 . 30 246 HSF AT2G26150 58.3 3.9e-72 268.9
Blo11g00264 BCT 7 382 HSF AT4G18880 50.6 3.1e-89 325.9
Blo01g01525 . 14 129 HSF AT4G18880 62.1 1.8e-36 150.6
Blo02g00237 . 5 475 HSF AT4G13980 55.1 1.5e-127 453.4
Blo18g00282 . 26 254 HSF AT3G22830 56.0 4.4e-67 252.3
Blo17g00285 . 30 232 HSF AT3G22830 53.3 9.0e-60 228.0
Blo05g00378 . 26 314 HSF AT3G51910 51.6 4.2e-69 258.5
Blo16g00980 BCT 167 373 HSF AT5G54070 51.0 1.4e-50 197.2
Blo15g00160 . 14 120 HSF AT4G36990 63.6 4.0e-38 155.6
Blo12g00576 . 13 112 HSF AT4G36990 65.0 1.7e-36 150.2
Blo02g01100 . 26 326 HSF AT4G11660 52.3 7.2e-80 294.7
Blo01g01525 . 13 116 HSF AT4G11660 75.0 1.7e-44 177.2
Blo12g00960 BCT,CCT 730 833 HSF AT4G11660 71.2 1.6e-42 170.6
Blo12g00576 . 13 111 HSF AT4G11660 70.7 4.0e-38 156.0
Blo12g00576 . 18 212 HSF AT2G41690 54.6 4.9e-45 178.3
Blo01g01525 . 16 340 HSF AT1G46264 56.8 3.8e-91 332.0
Blo12g00960 BCT,CCT 733 1057 HSF AT1G46264 54.6 2.3e-88 322.8
Blo15g00160 . 17 115 HSF AT1G46264 72.7 4.7e-41 165.6
Blo12g00576 . 15 112 HSF AT1G46264 69.4 2.8e-38 156.4
Blo02g00237 . 5 102 HSF AT1G46264 70.4 8.3e-38 154.8
Blo05g00378 . 20 140 HSF AT1G46264 61.2 1.2e-36 151.0
Blo16g01032 . 6 179 HSF AT3G24520 64.4 3.6e-59 225.7
Blo01g00509 CCT 1 163 HSF AT3G24520 69.9 3.7e-56 215.7
Blo08g00287 CCT 6 175 HSF AT3G24520 57.1 8.1e-51 198.0
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004116 2 2 2 0 2 1 2 1 1 1 1 1 2 1 1 2 1 4 2 1 1 1 1 1 1 1 1 3 2 2 44
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13302 PF00447 HSF_DNA-bind 1.30E-31 CL0123 Blo TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo15g00160 Blo_Chr15 FPKM 6.239956 6.97123 5.466618 5.536178 16.585386 16.142208 16.787594 3.157832 3.821342 3.385194