Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00269 ATGTCTGGAGTTTCTAACGACGTAGTAAACGAAGCTGTAGAGACTCAAAATTTCACATCTTTTAAGGAAGATTCCGAAGAAAATAACTTGCCGAAGGGTATTTTGAATCCTCAATGCCCTGCATGTCCAACTGCCAATGCTGCAAATGATGGGTTGATTGACACCTCCATTGATAAGCTATATGAAAGTCTATGTGCTTTGCAGAGTTCTGATCAATCCACTTCAAGGCATGGCTTTGGATCGGACGGCAAGGAGTCTCTGATTGATTCAGAGCTGCACCATCTTGTTGGAGGAGAAATGAGGGAGGTAGAGGTGATAAGAGAAGAAGTAGAAGAGACAAAGAGGCCAGATGGAAACACACTTTTCATAGAGAAGAGTTCTTCTTTTGATAAGATGTCTGTTAAGATGGATAAAAACCAATCTGTGAGTGCAAAATCTATTTCATCAAGTCCCTTGAGAAATGCAAAGAATCTGAAAAAACAGAATCATGTCAAAAAACAGAAAAACTCATTGTCTGGAGGTTCGAGGTCGAAGAACGGAATCGAGGATTCAGCCGGTCTGGATAATCCTGATCTAGGATCTTATTTACTCAAACAAGCAAGGAATTTGATTTCTTCAGGGGAAAACCCGGAAAAGGCTCTTGAACTGGCCCTTCAAGCCATGAAATCATTCGAATCATGTGCAGATAAGAAAAACAGTTTAGAATTCGTCATGTGTTTGCATGCCACAGCAGCAATCTACTGCAGCTTAGGCCGCTATTCTGAGGCAATTCCTCTTTTAGAACACTCCCTTGAGATTCCATCTCTAGAAGAAAGCAAAGAGCAAGCTCTAGCTAAATTTGCCAGTCATATGCAGTTAGGAGATACATATGCAATGTTGGGTAAGCTCGATAATTTGATATCTTGTTATACGACAGGATTGGAAATCCAAAAACGGGTTTTAGGAGGAAATGATATTAGAGTTAGTATGACTTGTAGGTATTTATCAGAAGCACATGTTCAAGCTTTGCAATTTGTTGAAGCCGAAAAGATCTGTCAAATGGCTCTCGATATTCATAAACAGAATGGAGCTATAGCTTCTCTCGAAGAAGCTGCAGATAGGAGACTAATGGGTCTAATCTGTGAGGCAAGGGGAGACCATGAAGCTGCTCTTGAGCATCTGGTTTTGGCTAGCATGGCTATGGTGGCAAATGGCCAGGAAATGGAGGTAGCTTCTGTTGATTGCAGTATTGGTGATATATATTTATCGTTATCTCGATATGGCGAGGCTGTTTTCGCTTATCAGAAAGCGCTCACAGTTTTTAAGACCACTAAAGGAGAGAATCATCCAGCCGTTGCTTCGGTTTTCGTTCGTTTGGCCGATTTGTGCAACAAGACTGGAAAAATAAGGGAATCAAAATCATATATCGAAAACGCCCTCCGAATTTACAAAAACTCGGTCGGTGGTGTTCATATCGAAGAGATTGCTTTTGTTCTGGTCGATCTATCTTCCATTTACGAATCGATGAATGAGCACGAGAAGGCGCTTGAATTGTTAAGCAAGGCGTTAAGTATGTATGACGATTCACCCGGCCAACAAAACACAATTGTGGGAATTGAAGCTCAGATGGGTGTTATTTACTACATTTTGGGAAATTACTTGGAATCCTACAACTCCTTTGAGCGTGCAACTTCGAAGCTACGGTTGAGCGGAGATAAAAAATCACCCTTTCTCGGGATTGCGATTAACCAAATGGGGCTTGCATGTGTGCAGTGTTGTGCCGTACATGAAGCAGTGGAGTTGTTTATAGAAGCAAAGAACATATTGGAACAAGAGTATGGACCTTATCACCCTGATACTCTTGGAGTCTACTCTAATCTGGCTGCAGCTTATGATGCAATCGGGAGGTTGGATGAAGCAATAGAAACGTTGGAGTATGTGGTCAGGACGAGAGAAGAAAAAGTAGGGACTGCCAATTCGGACGTCGATGACGAGAAGAGGAGGTTGAACGAGTTGCTGAAAGAAGCCGGCAGAGTTCAGAGCAGAAGAGGTCGATCCCTCGAGATTCTTCTTGATGACAACTCTGGTGCCATAAACAACATCAATGGGATGAAGGGGCGTATAATATATGTGGAGTTGGGGATAGGCTTTGGTGACAACCAATATCAAATTTTAGCTATTGGCGATACATATGAGAGCTCTGAAACTAAGTTTCAAGCTGAGAAGTCGTTCATAGCAAATGGTGTTTCTGAGGCACAAAATGATCTTGAAACTAAGAAAAACGATGAAGGAACTTGA 2277 41.85 MSGVSNDVVNEAVETQNFTSFKEDSEENNLPKGILNPQCPACPTANAANDGLIDTSIDKLYESLCALQSSDQSTSRHGFGSDGKESLIDSELHHLVGGEMREVEVIREEVEETKRPDGNTLFIEKSSSFDKMSVKMDKNQSVSAKSISSSPLRNAKNLKKQNHVKKQKNSLSGGSRSKNGIEDSAGLDNPDLGSYLLKQARNLISSGENPEKALELALQAMKSFESCADKKNSLEFVMCLHATAAIYCSLGRYSEAIPLLEHSLEIPSLEESKEQALAKFASHMQLGDTYAMLGKLDNLISCYTTGLEIQKRVLGGNDIRVSMTCRYLSEAHVQALQFVEAEKICQMALDIHKQNGAIASLEEAADRRLMGLICEARGDHEAALEHLVLASMAMVANGQEMEVASVDCSIGDIYLSLSRYGEAVFAYQKALTVFKTTKGENHPAVASVFVRLADLCNKTGKIRESKSYIENALRIYKNSVGGVHIEEIAFVLVDLSSIYESMNEHEKALELLSKALSMYDDSPGQQNTIVGIEAQMGVIYYILGNYLESYNSFERATSKLRLSGDKKSPFLGIAINQMGLACVQCCAVHEAVELFIEAKNILEQEYGPYHPDTLGVYSNLAAAYDAIGRLDEAIETLEYVVRTREEKVGTANSDVDDEKRRLNELLKEAGRVQSRRGRSLEILLDDNSGAINNINGMKGRIIYVELGIGFGDNQYQILAIGDTYESSETKFQAEKSFIANGVSEAQNDLETKKNDEGT 758
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 2903256 2905951 - BLOR06663 Blo15g00269 70669

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00269 758 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 6 687 - -
Blo15g00269 758 Coils Coil 648 675 - -
Blo15g00269 758 ProSiteProfiles TPR repeat profile. 404 437 IPR019734 GO:0005515
Blo15g00269 758 MobiDBLite consensus disorder prediction 134 186 - -
Blo15g00269 758 MobiDBLite consensus disorder prediction 134 157 - -
Blo15g00269 758 SUPERFAMILY TPR-like 234 385 IPR011990 GO:0005515
Blo15g00269 758 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 6 687 - -
Blo15g00269 758 Pfam Tetratricopeptide repeat 492 519 IPR019734 GO:0005515
Blo15g00269 758 Gene3D Tetratricopeptide repeat domain 390 564 IPR011990 GO:0005515
Blo15g00269 758 Gene3D Tetratricopeptide repeat domain 175 271 IPR011990 GO:0005515
Blo15g00269 758 Gene3D Tetratricopeptide repeat domain 565 678 IPR011990 GO:0005515
Blo15g00269 758 ProSiteProfiles TPR repeat profile. 614 647 IPR019734 GO:0005515
Blo15g00269 758 Pfam Tetratricopeptide repeat 239 268 IPR019734 GO:0005515
Blo15g00269 758 ProSiteProfiles TPR repeat profile. 489 522 IPR019734 GO:0005515
Blo15g00269 758 SUPERFAMILY TPR-like 401 522 IPR011990 GO:0005515
Blo15g00269 758 SUPERFAMILY TPR-like 534 644 IPR011990 GO:0005515
Blo15g00269 758 Gene3D Tetratricopeptide repeat domain 279 389 IPR011990 GO:0005515
Blo15g00269 758 Pfam Tetratricopeptide repeat 573 643 - -
Blo15g00269 758 Pfam Tetratricopeptide repeat 403 478 - -
Blo15g00269 758 SMART tpr_5 572 605 IPR019734 GO:0005515
Blo15g00269 758 SMART tpr_5 322 355 IPR019734 GO:0005515
Blo15g00269 758 SMART tpr_5 237 270 IPR019734 GO:0005515
Blo15g00269 758 SMART tpr_5 280 313 IPR019734 GO:0005515
Blo15g00269 758 SMART tpr_5 364 397 IPR019734 GO:0005515
Blo15g00269 758 SMART tpr_5 446 479 IPR019734 GO:0005515
Blo15g00269 758 SMART tpr_5 489 522 IPR019734 GO:0005515
Blo15g00269 758 SMART tpr_5 614 647 IPR019734 GO:0005515
Blo15g00269 758 SMART tpr_5 530 563 IPR019734 GO:0005515
Blo15g00269 758 SMART tpr_5 404 437 IPR019734 GO:0005515
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00269 - - - vvi:100255253 861.677
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo15g00269 Blo-Chr15:2903256 Blo16g00239 Blo-Chr16:5471522 0 dispersed
Blo15g00269 Blo-Chr15:2903256 Blo02g01164 Blo-Chr2:43294558 0 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g740 . . Bda06g00593 . . . Bma06g00233 . . . Cma10g00126 Cma11g00097 Car10g00117 Car11g00097 . . Cpe04g01552 Bhi02g00439 Tan09g2242 . . Hepe09g0198 . . Cla06g01660 Cam06g1845 Cec06g1896 Cco06g1901 Clacu06g1804 Cmu06g1745 Cre06g2564 Cone2ag0905 Cone16ag0107 . . . . . . . Blo15g00269 Bda11g01660 . Bpe07g00835 . . . . Cmo10g00132 Cmo11g00097 . . . . . Cpe18g00843 . . . . . . . . . . . . . . Lsi06g01550 Csa01g00154 Chy02g02576 Cme02g01966
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003461 3 3 3 3 3 1 2 1 1 1 1 1 2 1 1 2 1 3 2 1 1 1 1 1 1 1 1 1 2 2 48
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo15g00269 Blo_Chr15 FPKM 13.330795 13.768223 14.746282 14.760603 13.54724 11.489411 14.933969 13.99124 12.985037 13.83445