Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00272 ATGAAGGAAAACGGCGATGGGTTTGTGAGGGCAGATCAGATTGATCTGAAGAGCTTGGATGAGCAGCTGGAGAGGCATCTAACTAGAGCCTGGACGATGGAGAAGATCAGGAAGAAAGAAGAAGATGGTAATGGCGTTTCGACTACCGAAACCAGTCTCAGAAAAGGGGCGAAAGTGGCGGCGAAGAAGGAGAGGCAAGAGTGGGAAATTGACCCATCGAAGTTGATAATCAAGAATGTCATTGCTCGTGGCACTTTTGGCACCGTACACCGTGGTTTCTACGACGGCCAAGATGTCGCCGTCAAATTGCTTGAGTGGGGAGAAGAAGGTCACAGGACAGAATCCGAGATTACTTCGCTAAGAGCAGCATTCCAACAAGAAGTTGTCGTTTGGCATAAACTCGATCATCCTAACGTTACGAAGTTTATAGGGGCAACAATGGGGTCATCAGAATTACAGATTCAAACCGAAAACGGTCAAATTGCTATGCCGAGTAATGTATGTTGTGTTGTTGTGGAATATCTCCCGGGGGGTGCTCTCAAATCTTACCTCATTAAAAACCGGAGGAAGAAGCTACCTTATAAGGTCGTCGTCCAGCTAGCGTTTGATCTTGCTCGAGGGTTAAATTATCTTCACTCTCAGAAGATTGTTCACAGAGACGTAAAGACAGAAAACATGTTGTTGGACAGAACACGAACCGTGAAAATTGCTGATTTTGGCGTTGCTCGTGTTGAGGCCTCTAATCCGAACGACATGACGGGGGAGACTGGAACTCTCGGTTACATGGCTCCGGAGGTTCTTAATGGCAATCCATATAACAGGAAGTGTGATGTGTATAGTTTTGGAATCTGTCTGTGGGAAATATACTGCTGTGACATGCCTTATCCCGACCTTAGTTTCTCCGAAGTTACTTCGGCTGTCGTTTGTCAGAATCTGAGGCCGGAAATCCCAAGATGTTGTCCGAGTTCTTTAGCCAACGTGATGAAACGATGCTGGGATGCCAACCCGGATAAGAGGCCGGAGATGGACGAGGTGGTTTCGATGATTGAAGCCATTGATACGTCAAAAGGTGGAGGTATGATCCCGGTCGACCAGTCTCAAGGCTGTCTCTGCTTCCGAAAATATCGAGGGCCCTGA 1137 47.32 MKENGDGFVRADQIDLKSLDEQLERHLTRAWTMEKIRKKEEDGNGVSTTETSLRKGAKVAAKKERQEWEIDPSKLIIKNVIARGTFGTVHRGFYDGQDVAVKLLEWGEEGHRTESEITSLRAAFQQEVVVWHKLDHPNVTKFIGATMGSSELQIQTENGQIAMPSNVCCVVVEYLPGGALKSYLIKNRRKKLPYKVVVQLAFDLARGLNYLHSQKIVHRDVKTENMLLDRTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVCQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMIEAIDTSKGGGMIPVDQSQGCLCFRKYRGP 378
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 2938354 2941021 + BLOR06666 Blo15g00272 70672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00272 378 PRINTS Tyrosine kinase catalytic domain signature 320 342 IPR001245 GO:0004672|GO:0006468
Blo15g00272 378 PRINTS Tyrosine kinase catalytic domain signature 276 298 IPR001245 GO:0004672|GO:0006468
Blo15g00272 378 PRINTS Tyrosine kinase catalytic domain signature 172 185 IPR001245 GO:0004672|GO:0006468
Blo15g00272 378 PRINTS Tyrosine kinase catalytic domain signature 210 228 IPR001245 GO:0004672|GO:0006468
Blo15g00272 378 PIRSF ILK 26 358 - -
Blo15g00272 378 Gene3D Transferase(Phosphotransferase) domain 1 175 366 - -
Blo15g00272 378 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 372 - -
Blo15g00272 378 CDD STKc_MAP3K-like 81 349 - -
Blo15g00272 378 Gene3D Phosphorylase Kinase; domain 1 63 159 - -
Blo15g00272 378 SUPERFAMILY Protein kinase-like (PK-like) 64 348 IPR011009 -
Blo15g00272 378 PANTHER - 1 372 - -
Blo15g00272 378 ProSiteProfiles Protein kinase domain profile. 75 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo15g00272 378 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Blo15g00272 378 Pfam Protein tyrosine and serine/threonine kinase 77 348 IPR001245 GO:0004672|GO:0006468
Blo15g00272 378 SMART serkin_6 75 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00373 Blo-Chr5:4449380 Blo15g00272 Blo-Chr15:2938354 1.67E-176 dispersed
Blo06g00417 Blo-Chr6:24051728 Blo15g00272 Blo-Chr15:2938354 0 dispersed
Blo15g00272 Blo-Chr15:2938354 Blo17g00337 Blo-Chr17:3509438 0 dispersed
Blo15g00272 Blo-Chr15:2938354 Blo18g00343 Blo-Chr18:3574431 0 wgd
Blo15g00272 Blo-Chr15:2938354 Blo04g00738 Blo-Chr4:6896254 5.58E-66 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84709 PF07714 PK_Tyr_Ser-Thr 5.80E-63 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00272 - - csv:101209182 681.019