Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00275 ATGTTGAACCTACCTCTGACTCCGAGGTCTCTTCCGCGAGTAATAACCGTCCCCGGTATACTCTCCGAAGTCGATGGAGACGGAATCAACGACGAAGATTTCGATCCGGTCTTTTCGAAATCCCGAGCAAAGAAAATCGTAGTAGCTAACTTTCTCCCTCTACACGCCACGAAAGATTTAGTCTCTGGAAAATGGTGCTTTAGTTTTGACGAGGACTCCCTTTTGTTACAATTAAAAGACGGATTTTCGTCGGATATCGATGTTATTTACGTCGGATCGCTTAAAATCGAAGTGGAATCGATCGAACAAGAAGAAGTTTCTCAGAAATTGTTCGAGGATTTTAATTGCGTTCCTACATTTATTCCTCCGGATCTTCATAAACAGTTCTACCATGGATTTTGTAAGCAGCATTTGTGGCCTCTCTTGCATTGTATGCTGCCTTTAAGCCCCGATCATGGTTCTCGTTTCAACCGACAGCTATGGCAGGCTTACGTTTCGGTTAATAAAATATTTGCAAAGAAAGTAATGGAGGTGACAAATCCCGAAGAAGATTATGTGTGGGTTCATGATTATCACCTTATGGTTCTTCCGACTTTCTTGAGGAAGTATTTGAGTCGGGTTAAGCTCGGATTCTTTCTTCACAGCCCTTTTCCTCCATCAGAAATATATCGAACTCTTCCTGTCAGAGACGAGATTTTGAAAGCATTACTGAATGCAGACCTGATCGGTTTTCATACTTTCGATTATGCTCGTCACTTTCTCTCGTGTTGTAGTAGAATGCTAGGCCTCGGATATGAATCTAAGCGTGGGTATATCGGGCTTGAGTATTTTGGCCGTACAATATATATAAAGATTTTACCCGTTGGGATTCATATGGGTCGACTCGAGTCTGCGTTGAATAATCCGACCTCATCAATGAAGGCGAAAGAGATCCAGAAGTGTCTCCATGGGAAAAAAGTCATTCTTGGTGTTGATGATATGGACATATTCAAAGGTATTGGCTTGAAGTTATTAGCTTTCGAGCAACTCTTCTACCGGAATCCGGATTTGCGAAGCAAAGTTGTGCTCGTCCAGATCGTCAATCCTGCACGAAGCACTGGAAAAGATGTCGAAGAAGCTGAAAAAGAGACTTACTCGATAACCAAGAGGATTAACACTACTTTTGGCTCCCCTGGCTATTTGCCGGTCATCTTAATCAATCGTCCTATTCCCTTCCAAGAAAAGACAACATATTATGCTATGGCAGAGTGTTGTATCGTGAATGCCGTGAGGGACGGTATGAACTTGACTCCGTATGAATACATTGTTTGCAGACAAGGAACTCCGAAAATGGACAAAGTATTAGACATCGATTCGAATTCTCCTAGGACGAGTACACTTGTTGTGTCGGAGTTCATGGGTTGCTCGCCGTCTCTGAGTGGAGCCATCAGGGTGAACCCTTGGGATGTCGATGCAGTTGCGGATGCACTAAATATGGCCATCTCAATGCCTGATTTGGAGAAGCAGTTGAGACATGAAAAGCATTACCGTTATGTTAGCTCTCATGATGTTGCTTTTTGGGCTCGAAGTTTTATGCATGATTTGGAGCGAGCTTGCAAAGATCATTACAACAAACGTTGCTGGGGAATTGGGTTCGGTTTGGGTTTCAGAATATTGTCTCTTTCTCCGAGTTTTAAGAAGCTTTCTATCGACCATATCGTCTCTGCTTATAAGCGGACGAGTAGGAGAGTGATGTTTTTGGATTATGACGGGACCGTAGTTCCTCAATCGTCGATCAAGAAAAGTCCATCTCCGGAAGTCATTTCCGTACTGAATAATCTATGCGCAGACCCAAAAAACACAGTGTTTATCGTAAGCGGGAGGGAGAAAAGCTCTCTCGATTCATGGTTCGTTTCATGCGAGAATCTCGGTATAGCAGCCGAACATGGATTTTTCTTAAGGTGGAGTAAGAAATCGAGATGGGAAGTCTGTGGCGGAACGGCTGATTTCGGTTGGAAAAGGATTGCTGAACCGGTGATGAAATTATACACCGAGGCAACAGACGGGTCGTATATTGAGACCAAAGAAAGTGCATTGGTCTGGCACCATCGAGATGCCGACCCTGATTTCGGGTCGTGCCAAGCAATGGAACTCTTGGACCATCTCGAAAATGTGCTCGCAAATGAGCCCGTCGTCGTGAAGAGAGGCCAGCATATCGTCGAAGTAAAGCCACAGGGAGTGACGAAAGGATTTGTCGCGGAGAAAGTACTTTCCGGAATGATTGGCAAGGAGAAGCCACCCGATTTCGTGATGTGTATAGGCGACGATAGATCAGACGAAGACATGTTCGAGAGCATATTAAGCACTTCCTACAATCCCACACCCGAGATCTTCGCATGCACTGTCGGTCAGAAACCGAGCAAGGCCAAATATTATCTCGACGACACTTCGGATGTGGTGAAACTGCTTCAGGGTTTCTCCATCGCGTCCAATCGGAAGTCAAGGTGGAGCTCGGAGGCTCAAGTTGTCTTCACCAACGCTGTTTGA 2526 44.77 MLNLPLTPRSLPRVITVPGILSEVDGDGINDEDFDPVFSKSRAKKIVVANFLPLHATKDLVSGKWCFSFDEDSLLLQLKDGFSSDIDVIYVGSLKIEVESIEQEEVSQKLFEDFNCVPTFIPPDLHKQFYHGFCKQHLWPLLHCMLPLSPDHGSRFNRQLWQAYVSVNKIFAKKVMEVTNPEEDYVWVHDYHLMVLPTFLRKYLSRVKLGFFLHSPFPPSEIYRTLPVRDEILKALLNADLIGFHTFDYARHFLSCCSRMLGLGYESKRGYIGLEYFGRTIYIKILPVGIHMGRLESALNNPTSSMKAKEIQKCLHGKKVILGVDDMDIFKGIGLKLLAFEQLFYRNPDLRSKVVLVQIVNPARSTGKDVEEAEKETYSITKRINTTFGSPGYLPVILINRPIPFQEKTTYYAMAECCIVNAVRDGMNLTPYEYIVCRQGTPKMDKVLDIDSNSPRTSTLVVSEFMGCSPSLSGAIRVNPWDVDAVADALNMAISMPDLEKQLRHEKHYRYVSSHDVAFWARSFMHDLERACKDHYNKRCWGIGFGLGFRILSLSPSFKKLSIDHIVSAYKRTSRRVMFLDYDGTVVPQSSIKKSPSPEVISVLNNLCADPKNTVFIVSGREKSSLDSWFVSCENLGIAAEHGFFLRWSKKSRWEVCGGTADFGWKRIAEPVMKLYTEATDGSYIETKESALVWHHRDADPDFGSCQAMELLDHLENVLANEPVVVKRGQHIVEVKPQGVTKGFVAEKVLSGMIGKEKPPDFVMCIGDDRSDEDMFESILSTSYNPTPEIFACTVGQKPSKAKYYLDDTSDVVKLLQGFSIASNRKSRWSSEAQVVFTNAV 841
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 2979844 2982545 + BLOR06669 Blo15g00275 70675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00275 841 Pfam Glycosyltransferase family 20 44 529 IPR001830 GO:0003824|GO:0005992
Blo15g00275 841 Gene3D - 704 834 IPR023214 -
Blo15g00275 841 Gene3D - 575 694 IPR023214 -
Blo15g00275 841 Gene3D Glycogen Phosphorylase B; 297 513 - -
Blo15g00275 841 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 831 IPR001830 GO:0003824|GO:0005992
Blo15g00275 841 CDD HAD_TPP 577 814 - -
Blo15g00275 841 Gene3D Glycogen Phosphorylase B; 37 296 - -
Blo15g00275 841 CDD GT20_TPS 46 529 IPR001830 GO:0003824|GO:0005992
Blo15g00275 841 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING)-RELATED 1 831 - -
Blo15g00275 841 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 578 777 IPR006379 -
Blo15g00275 841 TIGRFAM T6PP: trehalose-phosphatase 575 817 IPR003337 GO:0003824|GO:0005992
Blo15g00275 841 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 45 533 - -
Blo15g00275 841 SUPERFAMILY HAD-like 576 818 IPR036412 -
Blo15g00275 841 Pfam Trehalose-phosphatase 579 810 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo11g00904 Blo-Chr11:18486430 Blo15g00275 Blo-Chr15:2979844 0 dispersed
Blo15g00275 Blo-Chr15:2979844 Blo16g00931 Blo-Chr16:37364768 0 dispersed
Blo15g00275 Blo-Chr15:2979844 Blo06g00869 Blo-Chr6:31980583 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00275 K16055 - rcu:8289035 1355.12