Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00296 ATGGGGCATAAGAAGAAAAACGCGCCTCCGCGTTCGAAAAGATCCGAGGCGGCTTCTCCGGCGGCTCAAGTTGCTTCCGGTGGAGCCGCCGGCGATGCTGTGAGTGTATTGAAGTCAGACCCTTGCTTGCAACCTAACGACCACAATAATCTCAGCCTTCATAAACACAACCAAGGTGAGGTCGAACCTGGGGCTGTGATTGAGTCGGACAGTTCATCACTCTCCATTGCTAAACTAGAATTTGAGCGTGCACTCAACGCCCTCAGGCGAGGGAGCCACAATAGGGCTCTCAAGTTGATGAAGGACGCATGCTTGAGGCATGAAAATTCGGCTTTGATTCACCGGCTTCAGGGAACTGTTTGTGTCAAAGTGGCGTCAATTATTGGTGATTTGCATACAAAGCAGCGGCATTTAAAGAATGCAATTGAGTCAGCTCATAAAGCAGTTGAACTCTCACCAAACTCGATTGAGTTTGCGCACTTCTATGCTAATTTGCTGTATGAGGTAGCAAATGATGGGAAGGAGTTCGAAGAAGTGGCGCAAGAGTGCAAACGAGCACTTGGGATTGAAAATCCAAATGATCCTGCAAAGGAGAGCTTGCAGGATGAGAGCCAGCAGAAGATATCCACTGCTGAAGGTCGAATTGCTCATGTGCAAAGTGAATTGCGGCAGCTTAGGCAGAAGTCCAAAATTGCCAAAATTGCTCCTCTATCAACATGGATGAAGAACGTAGGAAATGGGGAGGAGAAATTTCAGTTGATTCCCATTGGAAGAGTTGCTGAAGACCCCATGGAGGTTAGGTTGGTTCAGGCTAAGAGGCCGAATGAGATAAAGAAGGCAAATAAAACTCCTGAGGAGCTGAGGAAGGAGATTGAAGTTCGTGTTGCTGCTGCAAGACTTTTGCAGCAGAAATCTGAGACACCCCAAATGCAAAATGATGGAGATAAGAGCGATATACCTTCAGGGTCTGGACAGAGATCAGGCGAGCGGAGGAAGCATGGCAAGTTGAGGAAACGGGGATCTTCAGGTGAAAGAAAGGATAGGGTTCAGTTGTATTGGAATTCCTTGAGTATTGACTCGAAGAAAGACTTGCTTAGGGTCAAGATAAATGGTCTTAAGGAGCATTTCAATTCTTCTAAGGACGGTTCAGCAGCTGAAGTACTATCTGAATTGTCTTTTTGTGAGGCCAATAAATCGTGGAAGTCCTGGGTTTGCTGCCGATGTTCTGAGAAATTTGCAGATTCTGAATCTCATATGCAACATGTAGTGCAGGAGCACATGGGAAATCGATTGCCCAAAATGCAGTCACTTTTGCCAAAAAATGTTGACAATGAGTGGATTGAGATGATTCATGGTTGCCCTTGGAAACCATTGGATGTCTCAGCTTCTGTGAAAATGCTTATGAGTAAAACACTGGACAAAGATGCTAAACTTGTTGAAGATTTATGCACAAACTATCATACCGAGGATTGTGGTAACTACTTAAAAAATGAACAGGATTCATCTTCAGAGAAAGGAAGTTCAGAGAATAGTTGCATAAATAATACTTTTGAAAGAAATAACTGTGGGGAAAAGACTGACATAGAGTGCAGAAAGTGCCACGAAGATCAGGGACCTATGGAATATTCTCTGCCTGAAAGCTGGCCTATATCTGATGATTCAGATCGTTCAAAGCTTCTTGAAAAAATTCATGCCATATTTGAGTGGCTTATTAGTCATAAATATCTCGCTGAAACCCATCTGAAAATGGTTATTCAGTTGACAATGGATGAGCTTCTGGGTGTTCCATCTTGCTCTTGTCTTCTAAATCATGGGCTGGACCAAACACCGATTTGCATATGCTTTTTGGGAGCTTCACAGCTTAAGAAAATCCTCAAATACTTGCAAGATATATCTCATTCTTGCGGTTTGAACAGATATTTTGAAAAGAGTAATAATTGTATAAATGATGTCAACAATGGTATACAAGTCATTGAGACTAAAGTCAAAATTTTTTTGAATGGTGATGAGTCATATCTTCTTCTTGATGGTTGCTTAATGTCAGATGACGGCCTTACTGGTACTATCAACAATACTGCTGCTGAGAGCGTTGCTAGTTTGACTTCTGCGAAGAGTGTAAATGCAAACTGGATTCTGCCTGATGTGGATGCAATCTTGTCCTACATTTTTGTTGGCCCTTCGAGTGAGGAAGAGCTAGCATCATGGCTACGTTCAAAGGAAAAAAAAATAAAGGAAGGCAGAGAAATTCTCCAAATGCTGGAGAAGGAATTTGACCACCTACAGAGTCTTTGTGAGAGAAAATGTGAACATTTAAGCTATGAAGGCGCATTACATGCAGTTGAGGATCTTTGTCTTGAAGATGGTAAGAAGAGGGAGAATGTGACTGACTTTGTTCGTCAAAGCTACGAATCTGTCCTCAGAAAGCGAAGAGAAGAGTTTGTTCAATCAGAAAATGATGGGATGTTTCTTGGCAGCAGGTTTAAGTTAAATGCTTTGACCGATGTTTTGAAAGAAACCGATGATCTTAATGCCAATCAATTTGGATATGAAGAGACTCACGCAGGATTGACTTCTCAGTTGTGTGACCTGGAATCTGGGGAAAATGAATATTGGAGGGCTAAAGACTATTTTCATCAAAAAGAACAAATATCCATAGAGATTAGCAAAATTGATGCACAGATTATGAAAAATGTTACTGAAATGCAGCATTTGGAACTCAAGCTTGAGCCTGTTTGTTCTCACGATTATCAGTCAATACTATTGCCTCTTGTGAAATCATACTTGAGGGCTAAATTGGAGGATCTGGCTGAGAAAGACGCCACACAAAAATCTGATGCTGCAAGAGAAGCTTTTCTCGCAGAACTTGAGCTTGATTCAAAGAAAGGCGCGAGTCGAGGAAATGATAATTTGAAACAGGAGAAGACAAAAGACAAGAAAAAACACAAGGAATCTAAAAAAGCAAAAGATTCTAAGAATTTTGGTGGTTGTGAAGAAGATATACTTCATCACGAGACTTCTGGGCAAGGCTTGTTTTCCCTTCAGTCTGATGATGGCGATAATCTAGATTTAGTTGCTGCTGTGTCTGAAAATGCTGATGATTTGAAACTTCAGGAAGAGGAATTTAGAATGAAAATTGAGCTTGAAGCTGAAGAAAGAAAGCTTGAAGAGACTTTAGAATATCAAAGGCAAATTGAGGAGGAAGCTAAGCAGAAGCATCTTGCTGAGCAACACAAAAAATCTGCTCAGACATATACAGAAGATAATATTGCAGTGAATGTTCGGCATTGTGCCACTCCTTTTTCACTTGAAATGATGGAACAACTTGTAGAAGACAATGCATTTCACAAAAATTTTGAATGCTCGCCCATGAATGGTGTTCCAACGCCATTGAGACTTGATGATACTTTGGATGCCCAAAATCCTAGTGATAAACAAGGATTACTTAATGGAAGAATTTCTGAGAACTGTCTCCCACCTTATGATCGACGGACTGGAAGAAAAGGTAGACGAGCAAAGGGTTCTTCTAAATTGGTCAATGGACAGTATCAAACCATGACATCAGACAAGGATAATTGTGATTTAGAAGTTAGGATTTCACAGCTTGATAATCACGTAAAAGTGCGCGAAATATTTCCTGGCAATCCCCTGGCAGACAGTGGTAATGGTATAACCACATTAATTCCCGTTCAAGTGGAGGACGATGAGGAAGAGAGGTTCCAGGCCGATCTTAAAAAGGCTGTAATCCAAAGCCTCGATACATTCCAGGCACGACAGAATTTGCCAACAGTTTCAGGAGTGAGAAAATCACGTTCTACTGCTGCTGAAGTGAATCGCATTGGTATTTCATCCAGTGATGTAAATGGAGAAATAGCAAAGAGAACAGATGTATTTGGTACAGGACTGAAGAATGAAGTTGGTGAATATAATTGCTTTCTCAATGTCATTATCCAATCCTTATGGCACTTAAGATTGTTTCGAGATGAGTTCCTGAGAAGATCTACAATTGAGCATGTTCATGTGGGAGATCCTTGTGTTGTCTGTGCATTATATGAAATCTTTAGCTCCCTGAGCATTGCATCTACCGTCACCAATGAACAAGAACCAGTTGCCCCTACTTCTCTGAGAATGGCTCTTAGCAACCTCTATCCCGATAGTAGTTTCTTTCAAGAGGGTCAGATGAATGATGCTTCGGAGGTCCTGGAGGTGATATTTTCCTGCCTTCACCAAGCATTTACTTCTACTAGTATACAGACTTCTGATGCTATGGGTTCTTGGGATTGTGCAAATGATGTTTGTCTAGTGCATTCTATTTTTGGCATGGACATTTCTGAACGAATGAACTGTTTCAGCTGTGGCCTTGAGTCCAGACATCTAAAGTATACTTCCTTCTTCCACAATATAAATGCAAGTTCTCTCCGTACGACAAAGGTTTTGTGTGCAGAAAGCTCGTTTGATGAGCTTTTAAATGTAGTTGAAATGAACCATCAGGTAGCTTGTGATGTAGAGGCTGGTGGATGTGGAAAGCTCAACTATATCCATCACTTTCTTGCTGCTCCACCACATGTCTTCACAACAGTTTTGGGTTGGCAGAATACATGTGAGAGTGTTGATGACATAACAGCAACATTATCTGCGATAAATACTGAGATAGATATTGGGGTCCTATATCGTGGTCTAGATCCAAAAAATACTCACACTTTGGTCTCTGTGGTTTGCTACTATGGGCAACATTATCACTGCTTTGCGTATAGTCATGAGCATGAATGTTGGATAATGTATGATGATAAAACTGTTAAGGTAATTGGGAGCTGGGCTGAAGTATATACAATGTGTGAAAGAGGGCATTTGCAACCTCAGGTTCTTTTCTTTGAAGCTGTAAACTAG 4884 41.24 MGHKKKNAPPRSKRSEAASPAAQVASGGAAGDAVSVLKSDPCLQPNDHNNLSLHKHNQGEVEPGAVIESDSSSLSIAKLEFERALNALRRGSHNRALKLMKDACLRHENSALIHRLQGTVCVKVASIIGDLHTKQRHLKNAIESAHKAVELSPNSIEFAHFYANLLYEVANDGKEFEEVAQECKRALGIENPNDPAKESLQDESQQKISTAEGRIAHVQSELRQLRQKSKIAKIAPLSTWMKNVGNGEEKFQLIPIGRVAEDPMEVRLVQAKRPNEIKKANKTPEELRKEIEVRVAAARLLQQKSETPQMQNDGDKSDIPSGSGQRSGERRKHGKLRKRGSSGERKDRVQLYWNSLSIDSKKDLLRVKINGLKEHFNSSKDGSAAEVLSELSFCEANKSWKSWVCCRCSEKFADSESHMQHVVQEHMGNRLPKMQSLLPKNVDNEWIEMIHGCPWKPLDVSASVKMLMSKTLDKDAKLVEDLCTNYHTEDCGNYLKNEQDSSSEKGSSENSCINNTFERNNCGEKTDIECRKCHEDQGPMEYSLPESWPISDDSDRSKLLEKIHAIFEWLISHKYLAETHLKMVIQLTMDELLGVPSCSCLLNHGLDQTPICICFLGASQLKKILKYLQDISHSCGLNRYFEKSNNCINDVNNGIQVIETKVKIFLNGDESYLLLDGCLMSDDGLTGTINNTAAESVASLTSAKSVNANWILPDVDAILSYIFVGPSSEEELASWLRSKEKKIKEGREILQMLEKEFDHLQSLCERKCEHLSYEGALHAVEDLCLEDGKKRENVTDFVRQSYESVLRKRREEFVQSENDGMFLGSRFKLNALTDVLKETDDLNANQFGYEETHAGLTSQLCDLESGENEYWRAKDYFHQKEQISIEISKIDAQIMKNVTEMQHLELKLEPVCSHDYQSILLPLVKSYLRAKLEDLAEKDATQKSDAAREAFLAELELDSKKGASRGNDNLKQEKTKDKKKHKESKKAKDSKNFGGCEEDILHHETSGQGLFSLQSDDGDNLDLVAAVSENADDLKLQEEEFRMKIELEAEERKLEETLEYQRQIEEEAKQKHLAEQHKKSAQTYTEDNIAVNVRHCATPFSLEMMEQLVEDNAFHKNFECSPMNGVPTPLRLDDTLDAQNPSDKQGLLNGRISENCLPPYDRRTGRKGRRAKGSSKLVNGQYQTMTSDKDNCDLEVRISQLDNHVKVREIFPGNPLADSGNGITTLIPVQVEDDEEERFQADLKKAVIQSLDTFQARQNLPTVSGVRKSRSTAAEVNRIGISSSDVNGEIAKRTDVFGTGLKNEVGEYNCFLNVIIQSLWHLRLFRDEFLRRSTIEHVHVGDPCVVCALYEIFSSLSIASTVTNEQEPVAPTSLRMALSNLYPDSSFFQEGQMNDASEVLEVIFSCLHQAFTSTSIQTSDAMGSWDCANDVCLVHSIFGMDISERMNCFSCGLESRHLKYTSFFHNINASSLRTTKVLCAESSFDELLNVVEMNHQVACDVEAGGCGKLNYIHHFLAAPPHVFTTVLGWQNTCESVDDITATLSAINTEIDIGVLYRGLDPKNTHTLVSVVCYYGQHYHCFAYSHEHECWIMYDDKTVKVIGSWAEVYTMCERGHLQPQVLFFEAVN 1627
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 3289004 3296032 - BLOR06690 Blo15g00296 70696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00296 1627 PANTHER INACTIVE UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 53-LIKE 1 1627 - -
Blo15g00296 1627 PANTHER UBIQUITIN SPECIFIC PROTEINASE 1 1627 - -
Blo15g00296 1627 Gene3D Cysteine proteinases 1285 1627 - -
Blo15g00296 1627 ProSiteProfiles TPR repeat profile. 122 155 IPR019734 GO:0005515
Blo15g00296 1627 MobiDBLite consensus disorder prediction 302 343 - -
Blo15g00296 1627 ProSitePatterns Zinc finger C2H2 type domain signature. 405 426 IPR013087 -
Blo15g00296 1627 Coils Coil 1047 1067 - -
Blo15g00296 1627 Coils Coil 967 987 - -
Blo15g00296 1627 SUPERFAMILY Cysteine proteinases 1299 1624 IPR038765 -
Blo15g00296 1627 MobiDBLite consensus disorder prediction 962 995 - -
Blo15g00296 1627 Coils Coil 736 756 - -
Blo15g00296 1627 Pfam Ubiquitin carboxyl-terminal hydrolase 1300 1604 IPR001394 GO:0004843|GO:0016579
Blo15g00296 1627 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 1299 1626 IPR028889 -
Blo15g00296 1627 Coils Coil 208 228 - -
Blo15g00296 1627 Gene3D Tetratricopeptide repeat domain 39 307 IPR011990 GO:0005515
Blo15g00296 1627 SUPERFAMILY TPR-like 76 196 IPR011990 GO:0005515
Blo15g00296 1627 MobiDBLite consensus disorder prediction 1 32 - -
Blo15g00296 1627 MobiDBLite consensus disorder prediction 302 324 - -
Blo15g00296 1627 CDD Peptidase_C19 1392 1624 - -
Blo15g00296 1627 MobiDBLite consensus disorder prediction 962 977 - -
Blo15g00296 1627 Pfam Protein of unknown function (DUF627) 83 190 IPR006866 -
Blo15g00296 1627 Pfam Protein of unknown function (DUF629) 348 883 IPR006865 -
Blo15g00296 1627 MobiDBLite consensus disorder prediction 1143 1176 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo15g00296 Blo-Chr15:3289004 Blo08g00517 Blo-Chr8:14644618 9.89E-07 dispersed
Blo15g00296 Blo-Chr15:3289004 Blo18g00377 Blo-Chr18:3991172 2.24E-63 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00296 - - pavi:110752080 1929.84