Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00312 ATGACCCATCTTCTTCTACAGTTCACCCGGACAAATGGGGACGGTCACTGCCCAAGCTTCCGCTCCACTTTGCCGGCTAACTACTTCGAAATCGAAATTCTTAACCGGCTCGTCCATCGTCCCGGCGACAATGGGTTTGACCCACTTGGGCTAGCAGAGGATCCAGAGAATCTCCAGTGGTTCGTCCAAGCCGAACTTGTCAATGGCCGGTGGGCAGTGCTGGGTGTTGCCGGAATCTTGCTGCCGGAAGTGTTCACCAAGATCGGAATCCTCAACATAAGAAGATGGCAAGACATTAAAAACCCAGGACGTGTAAATCAAGATCCTATCTTCAAGCACTACAGCTTGCCGCCGAACCAAGTTGGCTATCCCGGCGGCATTTGCAATCCTCTCAACTTCGCCCCAACCCTCGAAGCCAAAGAGAAGGAGATTGCAAAAGGGAGGTTGGCGATGCTTGCATTTTTAGGGTTTGTAATTCAACACAACGTGACAGGACAAGGGCCATTCGACAACCTGTTACAGCACCTGTCGGATCCATGGCACAACACCATTATCCAGACGCTTGGTCAATAG 573 51.31 MTHLLLQFTRTNGDGHCPSFRSTLPANYFEIEILNRLVHRPGDNGFDPLGLAEDPENLQWFVQAELVNGRWAVLGVAGILLPEVFTKIGILNIRRWQDIKNPGRVNQDPIFKHYSLPPNQVGYPGGICNPLNFAPTLEAKEKEIAKGRLAMLAFLGFVIQHNVTGQGPFDNLLQHLSDPWHNTIIQTLGQ 190
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 3585189 3586160 - BLOR06706 Blo15g00312 70712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00312 190 Gene3D Chlorophyll a/b binding protein domain 32 97 - -
Blo15g00312 190 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 40 93 - -
Blo15g00312 190 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 40 93 IPR001344 GO:0009765|GO:0016020
Blo15g00312 190 Pfam Chlorophyll A-B binding protein 41 89 IPR022796 -
Blo15g00312 190 Pfam Chlorophyll A-B binding protein 87 161 IPR022796 -
Blo15g00312 190 SUPERFAMILY Chlorophyll a-b binding protein 40 188 - -
Blo15g00312 190 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 92 188 - -
Blo15g00312 190 Gene3D Chlorophyll a/b binding protein domain 98 190 - -
Blo15g00312 190 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 92 188 IPR001344 GO:0009765|GO:0016020
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00773 Blo15g00312 CCT
Blo04g00773 Blo15g00312 ECH
Blo13g00003 Blo15g00312 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo15g00312 Blo-Chr15:3585189 Blo09g00381 Blo-Chr9:14647042 1.96E-43 dispersed
Blo13g00003 Blo-Chr13:29525 Blo15g00312 Blo-Chr15:3585189 6.45E-88 wgd
Blo15g00312 Blo-Chr15:3585189 Blo04g00773 Blo-Chr4:7617799 2.70E-89 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00312 K08910 - nnu:104598101 277.33