Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00327 ATGGAGCACCGGACCGGATCCGGTCCGGTGCTATCGGGACCGGTCCTACCCGGTACCGGTCCACGCCTCCTAGTCCTCGTCCCTCGACTCATCGCTCCAGTTGGCACTCTCTTGTCCAGCCCTCGTCGTCAGCCAGCCTCTGCCAGCGACAGCCGACCAGCGAGCTCCGAGCTCCGTCCATCGACTGTCGCCAGTTGCCACTGCCACTCTGCCAGCTCCGAGCTCCGTCCGTCGTTGACAGTCGCCACTGCCAGCTCCGAGCTCCGAGTTCCGAGCTCCGTTCGTCTGCCACTGCCTCTGCCAGCTCCGAGCTCCGACCTCTGTCCAGACTGTCGCCACTGCCACTGCCACTGCCAGCTTGGGTACAAAACCGGTACCGGACCGGAACCGGTATCGAAAAACCCAGTGCAGAACCAGACCGGAACGGGTCTTCTGTGGGACCGGTACCGGTCTTCCAAAAAGGAGCACCGGTACCTCCGATCTGGTGCCAGACCGCTGGGTGTGCAGCACCGGCCCGGTATCGGAGAATCGGACCGAAACTGCTCCTACGGTACCGGGTTTGGTCCGTGTAAATACAGTACCGGACCGGATCCGGTCCGGTACTGTCGGAACCGGTGCTACACGGTCCGGTCCTTGGTACCAAACCGGTACCAGACCGGAACCGGTACCGGTAAACCCGGTCCAGAACCGGACCGGAACCGATCCTCTGTGGGACCGGTACCGGTCTTCCAAAAAGGGAAACCGGTACCGCCGGTCTGGTGCCGGATCACTGTAAAACCGGACCAGACCGGAAAAAATTCGTCTAAATGTCAGAGTATTCAGAACCCATTGGGTAAACATACTGGGCGTGAGAACTGCAGATCTCATCCTTCAAAATCAGGGAAAAATAATGCTGTACATTTTAATGATGGTGCTGGCAATTCTCTTCCCCTGCCAAATGAAGACAAAAAATGTATTCACTATCTTGATAAACGTGTTATAAGGCAAGATGGGTCTACCAAGCCACCGCCCGCATTTGTTACTAATTCTCTTGGTGAAAGTGGAGATTGTGATAAAAATTTTAAATATGATAAGCTTGAGGTAGTTCACAAAATAAAGTGGGGTCATCTAGAGGATGCTGATTTGTTACTGAATGATAATAGTCTTGAAGCTGGAATCAAATTTGGTGATATAGAAGGTGCTAATGTAATTTGCTCTAGGAAGCAAGAAGATAGTCCTGACGTGGCTTTATCTATAAGTTCTAGTCTAGCCTTATCTCTAGATAATGTTCCTCATCAGACAGTTTTAAGAACTCAAAGGGATGATTCATGTGATGATAACAGTCGAGAAGTCAGTGAGATATCTTCAGAATGTGTAGAATTACAAGTCAAGAGTAAAGTTAATGTCAATCCTGATCATAATTCAAACAGGGAAGAAATAAATACCGAGGATGACAAGCATGTAAATGATGATTGTTTTGTAACAAATTCTCCGTTGATTGAAGCTGTGAAATTTCAAGTTTTAATAGAGGTAGATGATTCAGAAATTTCTAATGCAATGGAAAAGAATGTAATTTCAAGATCATCTCTGACGGCCCATGATACCAAGTTAGTTCCAGCTGAAAGGGTTGAATGTGAAGCTTCTAGTAAATCAATCACATATTCTGTTGAAGAGGTTCAGATTCCCGAGGCGGGTGCAAAACATGATGATGCGCCAAACACAAATCTTGGGAGTGCCCTTGGTGAAGGCGAGACAGCTGAAAGTAAAGAAAGGTTTAGGCAGCGTCTCTGGTGCTTTCTGTTTGAAAATCTTAATAGGGCAGTAGATGAACTTTATCTTCTTTGTGAACTTGAATGCGATGTGGAACAGATGAAAGAGGCTGTTCTTGTTCTTGAAGAGGCTGCATTTGATTTTAGGGAACTAAATGGTCGAGTGGAGGAGTTTGAGAAGGTGAAGAAGTCCTCTTTATTGGCAGTTGCTGATGGGGTGTTGCCAATAACTTTAAAGGGTGACCACCGCAGGCCACATGCTCTCTCTTGGGAGGTTCGAAGGATGACTACTTCTCCTCACAGAGCAGAGATACTTTCTTCTTCGCTGGAGGCTTTTAAGAAAATTCGTCAAGAGAGAGCCATCGACCACACATCTAATGATACTAATATTCAGGGGCCTGAGCCGCTCAATCTCCAATCTGTCGCTGAAACAAACTCATCTGTGGTAACTCACGATGCACCTAGTGCAAAAGATTCAGTTACAAAGTCAAGCATAGAAAGTAGAGATTGGAATATCACCCTTGGTGTCCAAAGTGGAGAAGGGAGAAAGATTGAGTCAACCAGATTCAGGAAGATGAATTTGGCACAAAATGGACGTCCCTCTCCACCATTTAGTGTTAATTCATCTAAGCCACCTGTTGCTGGAAAGTGTAAGAAAGAACAGCTTGAGTTGGACGTGGAGAAGTTACTTCCCAGGAGAGACAAAGTCTGCACAGAAAATAATAGTGATAAAATTCAGAAATCTACAGATCAGTTCAAAAAAGTGACAGTGTTTCCTGAAAAAGATAAGGAAAAAGAAAGAAGGAATACTGCTCCATGGAAATCCATGGATGCTTGGAAAGAGAAGAGGAACTGGGAGGACATTCTTTCCTCATCATCCCGAGGCACTGCTCGTGTTTCACATTCACCTGGCATGAACAGGAAAAGTGCTGAGCGAGCTCGTGTATTGCATGATAAACTAATGTCACCTGAGAAGAAGAAAAAGACTGCAGTGGATCTAAAAAGAGAAGCAGAAGAAAAGCATGCCCGTGCAATGAAAATCAGAAATGAGTTAGAGAATGAGAGAGTTCAAAAGCTGCAACGCACCTCAGAAAAATTAAATCGTGTCAATGAATGGCAGGCGGTACGTACTATGAAATTACGGGAAGGAATGTTTGCACGTCAACAACGCAGTGAATCTCGGCACGAAGCATTTCTAGCCCAAGTTGTGAGAAGAGCTGGCGATGAAAGCAGCAAAGTAAATGAAGTCCGTTTTATCACCTCTTTAAATGAAGAAAATAAAAAAATAATATTGCGCCAGAAGCTTCATGGTTCTGAGTTAAGGAGAGCTGAAAAGCTGCAAGTGATGAAAACTAAGCAAAAGGAGGATATGGCCAGGGAAGAAGCTGTTTTAGAACGAAGAAAACTTATTGAAGCTGAGAAGTTGCAACGTCTTGCTGAAACACAGCGGAAAAAGGAAGAGGCTCAAGTTAGAAGGGAGGGGGAACGTAAAGCATCGAGTGCTGCCCGTGAAGCAAGGGCCTTAGAACAAGTACGAAGAAAGGAAGAAAGGGCAAAAGCCCAGCAAGAAGAAGCTGAACTTTTGGCCCAGAAGTTGGCTGAGAGACTTAGTGAAAGTGAGCAACGTCGAAAGTTTTATTTGGAGCAAATACGGGAAAGGGCTTCTATGGATTTTCGAGATCAATCTTCACCTTTATTGCGTCGAGCAGTGAACAAGGATGGGCAGGGTCGATCTCCACCAACTAATAGTGGTGAAGACCGGCAACCAAGCAACTTTGACTTTGTGGGTACTAGTCCTGTAGTGGACAATGCTGTCCTCCAAAATTCAATGAAGCGGAAGATTAAAAGAATTCGGCAGAGGCTTATGGCTCTAAAGTACGAATTTATTGAGCCTTCTTTCGGTGTGGAAAACGTTGGAATTGGTTATAGAACAGCTGTTGGAACTGCAAGAGTAAAAGTTGGTAGGTGGCTACAAGAACTTCAGCGACTTCGGCAAGCTAGAAAAGAAGGAGCTGCCAGTATCGGGCTAATAATTGCTGACATGATCAAGTTCTTGGATGGAAAAGACCCTGAGCTACAAGCTTCCCGCCAGGCTGGTTTACTTGATTTTATTGCTTCAGCTCTTCCTGCCTCCCATACATCTAAACCTGAAGCCTGCCAGGTGACAATTCATCTTCTAAAATTGCTGAGGGTGGTGTTATCTGTGCCGGCAAATAGGAGTTACTTCCTTGCACAGAATCTCTTACCACCAATCATCCCTATGCTATCAGCAGCACTTGAGAACTATATAAAAATTGCGGCATCCATTAATGCTCCTGGCAACGTCAATATTTCGTCAAGTAAAACATTGATTGAAAATTTTGAGTCAATCTCTGAAGTGGTTGATGGCTTTTTGTGGACTGTCAGTACAATAATGGGCCATATAAGTTCTGAAGAACGACAAATCCAAATGTGGGATGGGTTGCTAGAGCTGTTGATCACGTATGAAGTTATTCACCGGTTACGAGATCTTTTTGCACTTTATGATAGACCCCAAGTTGAAGGCTCGCCATTTCCTTCTTCAATTCTCTTAAGCGTAAACCTATTGGTGGTTTTAACTTCAAGACCTGGAATGAGTAGCTCCATTAATTGGGAGTTGCTTCCCATTGAGACAATTCAAAAGATGGACTTAGCTGACTTTTCTGATTTAAAAGTTTCTCATGTAACTGAACCTAATGGATATTGTCAACCGCCATCACCTCTTATTAGTTATGCTGGTGGTGCATACATATCTGGCGTGGCAGCATATAGTCTAGTATCTGAAGATACTCTAGCCAATAATAAAATGGAGCAGTCTGTCTCTTCAGGTGAGTTGAATAATCTCAACGCTGTCCAGAATGATATTTTGACTGAAGTTGAGAAAGGTAAAGAAATTCAGAAGCCATTAATACATCAGAGGTACGAGGATGGTGCAGGGAATTATATTACTGAACAAAAAGTTGAAATGAACTTAGAGCAACCAGTAGCAATTCTTCTATCTTCCATGTCTGATACTGGCCTTGTCAGTCTCACTTCTTTGTTAACAGCTGTCCTGCTACAAGCAAACAATAGGCTCTCTTCTGAGCAGGGCTCCTATGTTCTGCCATCTAATTTTGAAGAGGTTGCTGTTTGTGTGCTAAAGGTGTTGAATCATCTTGCACTTTTGGATCTCAAGTTCATGCAGAGAATGCTAGCTAGGTCAGATCTAAGGATGGAGTTTTTTCATTTAATGAGCTTCCTTCTTTCTCACTGTACCAGCAAGTGGAAAGACGCAAAAGATCAGATCGCACCTTCATCTGTTCTTCCATGTTTAAGTGATTTCTACTTTAATTGGAAACAATTCCTATGCTTCTTGTTAAAAAAATACATTGATACTGATTGTCCATATTGTATTGGTTTACTTCTGCTTGAATCTTTACTACTTCTTGCTCACTTTGCCTTATTCCATCCTGGCAATCAAGCGGTCCTACGCTGGGGAAAGAGTCCTACCATCCTTCACAAGGTATGCGATCTACCTTTTGTGTTCTTCAGTGACTCTGAATTGATGCCTGTCTTAGGAAGCACATTAGTCGCTATTTGTTACGGGTGTGAGCAGAACAAGTCTGTGGTTCAGCAAGAGCTAAGCACAGATATGGTTCTCTATTTGTTAAGGTCTTGTAGAAATGTTATACCTGCCCATCGGTTGAATTCAACTATCAATAGTTTGCCCGCTGACAATTTGAGTGAATGTAATCAACAAGGCCCTGAATTTAGGAAACACCAAATGGATAGTCCCGTAAGACCTAGTCGTTGTGTTGGCAGAACTACAAAGGTTTGCTTGGGGAAGCCTGGTTATTTGGGAAATAGCATTAGGATTGGGAGAGCAAGAAATTTAAAAGACAACAAGATAACCAAACCCCCAGAAGAAATGGCTTTTAAGCACAATCAACCAGCTTCAGATTTTGCTAAGGTTATGTTGCATTATGGATTCACCTGCAGCTTCATTGATAGAGCAGAGCAGTTCTTTTCAGCTGGGATTCCTATTGAAGTGAATGAATAG 5805 44.0 MEHRTGSGPVLSGPVLPGTGPRLLVLVPRLIAPVGTLLSSPRRQPASASDSRPASSELRPSTVASCHCHSASSELRPSLTVATASSELRVPSSVRLPLPLPAPSSDLCPDCRHCHCHCQLGYKTGTGPEPVSKNPVQNQTGTGLLWDRYRSSKKEHRYLRSGARPLGVQHRPGIGESDRNCSYGTGFGPCKYSTGPDPVRYCRNRCYTVRSLVPNRYQTGTGTGKPGPEPDRNRSSVGPVPVFQKGKPVPPVWCRITVKPDQTGKNSSKCQSIQNPLGKHTGRENCRSHPSKSGKNNAVHFNDGAGNSLPLPNEDKKCIHYLDKRVIRQDGSTKPPPAFVTNSLGESGDCDKNFKYDKLEVVHKIKWGHLEDADLLLNDNSLEAGIKFGDIEGANVICSRKQEDSPDVALSISSSLALSLDNVPHQTVLRTQRDDSCDDNSREVSEISSECVELQVKSKVNVNPDHNSNREEINTEDDKHVNDDCFVTNSPLIEAVKFQVLIEVDDSEISNAMEKNVISRSSLTAHDTKLVPAERVECEASSKSITYSVEEVQIPEAGAKHDDAPNTNLGSALGEGETAESKERFRQRLWCFLFENLNRAVDELYLLCELECDVEQMKEAVLVLEEAAFDFRELNGRVEEFEKVKKSSLLAVADGVLPITLKGDHRRPHALSWEVRRMTTSPHRAEILSSSLEAFKKIRQERAIDHTSNDTNIQGPEPLNLQSVAETNSSVVTHDAPSAKDSVTKSSIESRDWNITLGVQSGEGRKIESTRFRKMNLAQNGRPSPPFSVNSSKPPVAGKCKKEQLELDVEKLLPRRDKVCTENNSDKIQKSTDQFKKVTVFPEKDKEKERRNTAPWKSMDAWKEKRNWEDILSSSSRGTARVSHSPGMNRKSAERARVLHDKLMSPEKKKKTAVDLKREAEEKHARAMKIRNELENERVQKLQRTSEKLNRVNEWQAVRTMKLREGMFARQQRSESRHEAFLAQVVRRAGDESSKVNEVRFITSLNEENKKIILRQKLHGSELRRAEKLQVMKTKQKEDMAREEAVLERRKLIEAEKLQRLAETQRKKEEAQVRREGERKASSAAREARALEQVRRKEERAKAQQEEAELLAQKLAERLSESEQRRKFYLEQIRERASMDFRDQSSPLLRRAVNKDGQGRSPPTNSGEDRQPSNFDFVGTSPVVDNAVLQNSMKRKIKRIRQRLMALKYEFIEPSFGVENVGIGYRTAVGTARVKVGRWLQELQRLRQARKEGAASIGLIIADMIKFLDGKDPELQASRQAGLLDFIASALPASHTSKPEACQVTIHLLKLLRVVLSVPANRSYFLAQNLLPPIIPMLSAALENYIKIAASINAPGNVNISSSKTLIENFESISEVVDGFLWTVSTIMGHISSEERQIQMWDGLLELLITYEVIHRLRDLFALYDRPQVEGSPFPSSILLSVNLLVVLTSRPGMSSSINWELLPIETIQKMDLADFSDLKVSHVTEPNGYCQPPSPLISYAGGAYISGVAAYSLVSEDTLANNKMEQSVSSGELNNLNAVQNDILTEVEKGKEIQKPLIHQRYEDGAGNYITEQKVEMNLEQPVAILLSSMSDTGLVSLTSLLTAVLLQANNRLSSEQGSYVLPSNFEEVAVCVLKVLNHLALLDLKFMQRMLARSDLRMEFFHLMSFLLSHCTSKWKDAKDQIAPSSVLPCLSDFYFNWKQFLCFLLKKYIDTDCPYCIGLLLLESLLLLAHFALFHPGNQAVLRWGKSPTILHKVCDLPFVFFSDSELMPVLGSTLVAICYGCEQNKSVVQQELSTDMVLYLLRSCRNVIPAHRLNSTINSLPADNLSECNQQGPEFRKHQMDSPVRPSRCVGRTTKVCLGKPGYLGNSIRIGRARNLKDNKITKPPEEMAFKHNQPASDFAKVMLHYGFTCSFIDRAEQFFSAGIPIEVNE 1934
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 3828445 3841969 - BLOR06721 Blo15g00327 70727

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00327 1934 MobiDBLite consensus disorder prediction 777 801 - -
Blo15g00327 1934 Coils Coil 1052 1132 - -
Blo15g00327 1934 Pfam S phase cyclin A-associated protein in the endoplasmic reticulum 579 682 IPR032446 -
Blo15g00327 1934 Coils Coil 913 952 - -
Blo15g00327 1934 MobiDBLite consensus disorder prediction 1063 1100 - -
Blo15g00327 1934 MobiDBLite consensus disorder prediction 215 242 - -
Blo15g00327 1934 MobiDBLite consensus disorder prediction 264 296 - -
Blo15g00327 1934 MobiDBLite consensus disorder prediction 556 577 - -
Blo15g00327 1934 PANTHER S PHASE CYCLIN A-ASSOCIATED PROTEIN IN THE ENDOPLASMIC RETICULUM 265 1926 - -
Blo15g00327 1934 MobiDBLite consensus disorder prediction 39 60 - -
Blo15g00327 1934 MobiDBLite consensus disorder prediction 264 281 - -
Blo15g00327 1934 MobiDBLite consensus disorder prediction 1158 1177 - -
Blo15g00327 1934 MobiDBLite consensus disorder prediction 1144 1177 - -
Blo15g00327 1934 MobiDBLite consensus disorder prediction 40 60 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00327 K24869 SCAPER; S phase cyclin A-associated protein in the endoplasmic reticulum - qsu:111994725 1787.31
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00221 Blo-Chr1:2821693 Blo15g00327 Blo-Chr15:3828445 8.65E-52 dispersed
Blo01g01239 Blo-Chr1:46882982 Blo15g00327 Blo-Chr15:3828445 6.34E-14 dispersed
Blo04g01184 Blo-Chr4:21300320 Blo15g00327 Blo-Chr15:3828445 5.13E-11 dispersed
Blo07g00955 Blo-Chr7:28926570 Blo15g00327 Blo-Chr15:3828445 2.42E-17 dispersed
Blo10g00238 Blo-Chr10:3220406 Blo15g00327 Blo-Chr15:3828445 4.80E-19 dispersed
Blo15g00327 Blo-Chr15:3828445 Blo16g01193 Blo-Chr16:40428819 1.33E-48 dispersed
Blo15g00327 Blo-Chr15:3828445 Blo01g00547 Blo-Chr1:6014082 2.20E-17 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g620 . . Bda06g00532 . . . . Bma12g00976 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Blo15g00327 . . Bpe07g00766 . . . . Cmo10g00171 . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007144 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7 1 35
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo15g00327 Blo_Chr15 FPKM 9.326683 8.507506 0.716489 0.822162 0.0 0.0 0.0 0.753715 0.603655 0.574988