Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00329 ATGGTTCAGAAACGGCCCTTTGGCGATGGAGAATCATTGGAGATATCTTCTAAATTCCCAAGACCACTTGAAGGGAATGAACGACTAGTTTCATTTTCGGAATCTGTTTTTCCTGAGTACTTGATGCAGGAACCCCACATTTCAGAGGATCGATTCATGAAGGCTGATAGCAAAAGTAATGAGAAGGTTTCTGAGCCTCATGAAAGAATCCAAGACATTGATTCTGGTCTGCCTAGCTGCAACTCAAATTCAAATTCTTCTTGGGCTGCCAGCAGTACAAGTGAGGAGGATTCTCAGCTGGTGGAACCCTTTCACCTATCATTCCATCCTGAAGTTTACCCTCATGATCGTCCACTGAGACCATTTGTGCCCCGTGAAGATATATATTCTCTACTTTTACACTATCCTCCCCAAAAACTTGTAGCTATTGGACCTGATCATCAAGCTGAAATTCCACCTTGGATCTCTCCACCGCAGAAGAACTTGCTGGGTCATCCAAATGAGGAGAATATACTAATGGGTAAATGTGTCATTTCGATGCTTGATTTGGACTCATCATCCAGTTATGGCAATGAAGTTGGACGTGGAAGAACTGATTGCGGCTGTGAAGATGGTAATTCCGTTAGATGTGTCCGTCAACATATAGTAGAAGCCAGAGAAAAGCTCAAAAAAGCTATCGGTCAAGAGAGTTTTGAGGAGCTAGGCTTTTATAATATGGGAGAACAAGCGGCGCAGCAGTGGAGTGAAAAGGAGGAACAATTATTTCATGAAGTTGTATTCTCTAATCCAGCATCACTTGGGAGGAATTTTTGGCATAGACTTGCAGTCATCTTCCCATCCCGAACCAAAAAAGAGATAGTTAGCTACTATTTTAACGTTTTTATCCTTAGAAGACGAGCTCAGCAGAATCGAAATGACTCGTTGGATATCGATAGTGACAATGATGAATGGCAGGGAAGTGATGATGATTTTGGTGAAAATGAACATGGAACGACGGAGGAAGATGAGGATTCTGCTGTCGAGTCTCCAGTATATCACAGCAGACTTAATTACAATCAGCATGAGCAAGGCGATTTGCAAGATTGTGGTGAGGAATCTGGCGAATTGTTCAACACCCAGGAATTTTTGGGTCATACGTCCAAATTTTCCGACAAATCCAACAAGTGTTTGCTCAATTATTGCCACTCCAGTCCTACAATTGCGACACAGGACGAAACTCCATGGCCGGAAAGAGGTGGAGATCAAGAGTTTCAGGATGATTCATGCATTTCATCGGATTTAGGGACTTCACAAGGATCCCAGGTTTGGAAGACGGACCTAAATGGATCGAGCAGTAAAGGGTCGGGAAACGAATACACACTGGAATCGTGCAATAGCAGGGCATGGGATTCCGGGTTTTTATCAAGCTTCAAAACTGAAGTTGACTTCTTGCCAACTTGCAGTGTGATCGAAGAGGTTTTCGGAGAGGGCACGGGTAATTACAAGGGGAAAGATGCAACTAGAACTTGA 1509 43.34 MVQKRPFGDGESLEISSKFPRPLEGNERLVSFSESVFPEYLMQEPHISEDRFMKADSKSNEKVSEPHERIQDIDSGLPSCNSNSNSSWAASSTSEEDSQLVEPFHLSFHPEVYPHDRPLRPFVPREDIYSLLLHYPPQKLVAIGPDHQAEIPPWISPPQKNLLGHPNEENILMGKCVISMLDLDSSSSYGNEVGRGRTDCGCEDGNSVRCVRQHIVEAREKLKKAIGQESFEELGFYNMGEQAAQQWSEKEEQLFHEVVFSNPASLGRNFWHRLAVIFPSRTKKEIVSYYFNVFILRRRAQQNRNDSLDIDSDNDEWQGSDDDFGENEHGTTEEDEDSAVESPVYHSRLNYNQHEQGDLQDCGEESGELFNTQEFLGHTSKFSDKSNKCLLNYCHSSPTIATQDETPWPERGGDQEFQDDSCISSDLGTSQGSQVWKTDLNGSSSKGSGNEYTLESCNSRAWDSGFLSSFKTEVDFLPTCSVIEEVFGEGTGNYKGKDATRT 502
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 3854256 3856116 - BLOR06723 Blo15g00329 70729

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00329 502 PANTHER DNA BINDING PROTEIN 1 495 - -
Blo15g00329 502 MobiDBLite consensus disorder prediction 75 95 - -
Blo15g00329 502 MobiDBLite consensus disorder prediction 306 340 - -
Blo15g00329 502 PANTHER DNA BINDING PROTEIN 1 495 - -
Blo15g00329 502 MobiDBLite consensus disorder prediction 51 72 - -
Blo15g00329 502 Gene3D - 247 309 - -
Blo15g00329 502 SUPERFAMILY Homeodomain-like 245 294 IPR009057 -
Blo15g00329 502 MobiDBLite consensus disorder prediction 312 338 - -
Blo15g00329 502 Pfam Myb-like DNA-binding domain 245 293 IPR001005 -
Blo15g00329 502 MobiDBLite consensus disorder prediction 400 419 - -
Blo15g00329 502 MobiDBLite consensus disorder prediction 51 95 - -
Blo15g00329 502 CDD SANT 247 294 IPR001005 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00329 - - - qsu:112029647 464.151
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo15g00329 Blo-Chr15:3854256 Blo19g00331 Blo-Chr19:21964822 7.46E-23 dispersed
Blo12g00248 Blo-Chr12:15533819 Blo15g00329 Blo-Chr15:3854256 1.29E-26 transposed
Blo15g00329 Blo-Chr15:3854256 Blo06g01222 Blo-Chr6:35821740 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g612 . . Bda06g00529 . . . . Bma12g00973 . . . . Car10g00208 . . . . . . . . . . . . . . . . . . . . Cone13ag0045 Cone19ag0050 . . . . . Blo15g00329 . . Bpe07g00763 . . . . . . . . . . . Cpe18g00769 . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004521 2 2 2 1 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 3 2 1 42
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo15g00329 Blo_Chr15 FPKM 77.08519 84.176277 8.207754 10.078793 11.561658 10.813534 12.358884 8.30262 8.656495 7.551956