Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo15g00339 | ATGGCGAAGACTGCGACACCATATGGAATTTTGAAGATTCAGGCTAATCCAACTCCGGAATCGTCCTCAGAAGTCTCGGATTTAGTGCTTCAGGTTCTCGATCTTAAAGCCGCGGGCAATCGTTACATGTTTACAGCCAGCGATGGAACTATGAAGTTGAAAGCCATTCTACCATCGAATCTCACTTCCGAGGTGGTCTCAGGGAAGATTCAGAACCTAGGCCTTATTCGCATTATTGATTATTCCCTCAATGACATCCCAAACAAGTCGGAGAAGTATTTGATTGTGACTAAATGCGAGGTTGTTTCTCCTGCTCTTGAAATGGAGATTACGAACGTAGTCAAGAGTGAGGAATCTGAAATTTTTCTGACACCAAAACAAGAAAATGACTGCGAGAGTGAATTCAAAGCAGAAAATCCAGGGATACTTCTAAAGCCAAAGCCTGAAATGTTTGCAAAATCTGCAGCTCAAATCGTAAATGAACAAAGATCGAACTTGGCCCCAACTGCACGCATGGCCATGACAAGGAGAGTTCATCCTCTTCTTTCATTGAATCCCTACCAAGGCAATTGGACAATTAAAGTTCGTGTCACGAATAAGGAGGTTATGCGTAATTACAAGAATGCCAGGGGAGAAGGCTGCGTCTTCAATGTCGAATTGACTGATGATGATGAAACCCAAATACAGGCAACAATGTTCAATGAAGCTGCTAGAAAGTTCTATGATAAATTCGAGCTTGGAAAGGTTTATTACATTTCAAAGGGAACTCTAAAGGTTGCTAACAAGAAATTCAATACAGTGAAAAATGATTATGAAATGACTTTAAATGAGAATTCAGAGGTGGAAGAGGCCATCAATGAAGCTACTTTTGTGCCTGTGACGAAATTCAATTTTGTCCCAATTGATATGCTGGGTCCTTACGTGAATGGAAAAGAACTTGTTGATGTTATTGGAGTGGTTCAAAATGTTTCTCCTACAATCAGTATTCGAAGGAAGATCAATAATGAAACTGCTCCGAAGCGTGAAATAACTATTGCTGATGAAACAAAAAAAACAGTAGTAGTCTCACTATGGAATGAGCTCGCAACTAATGTGGGACAGGAGTTACTCGACATGGTGGATCAATCACCCGTAATTGCTATTAAGTCTCTTAGAGTTGGAGATTTTCAAGGTGTATCTCTTTCATCGGTGAGTAAAAGCAAACTGCTAGTAAATCCAGACATACCTGAGGCAAAAAAGTTAAAGTTATGGTTTGATTCTGAAGGCAAAGGAGCATCAATGGCGTCCGCTGGCTCTAGTTTGAGCCCATCATCCAAGAACGGAGCAAGGTCTATGTATTCTGACCGGATATCTTTGTCTTACTTAATACAAAACCCATCACTAGGGGATGATAAGATTGAGAAATTAAATAACGTGGCAGCACCAATGTTCTTCAGCATTAGAGCATATATTAGCTCCATCAAACCTGATCAGACTATGTGGTACCGAGCTTGCAATGCTTGCAACAAGAAGGTGACTGATGCTATAGGTTCTGGATTCTGGTGTGAAGGTTGCCAGAAAAGTGATGGAGAATGCAGTTTAAGATATATTATGGTAGTTAGAATTTCGGATGCCAGCGGGGAAGTGTATCTCTCTCTCTTCAATGACGAGGCAGAAAAAGTCATTGGATGCACAGCTGATGAGCTTGACAAAATGAAATCACAGATTGGTGAAGAGAATTCATATGAGATGAAATTGAAAGAGGCTACTTGGGTTCCTTATCTATTTAGAGTAAGCGTTTCTCAGAATGAATACAACAACGAGAAGAGGCAGAGGATTACTGCCAGAGCTGTTGCTCCTGTCGATTTTGCTTCTGAATCCAGACTTTTGCTTGAAGCAATTTCGGGTTCAAGATTTTCAAAATGA | 1905 | 40.58 | MAKTATPYGILKIQANPTPESSSEVSDLVLQVLDLKAAGNRYMFTASDGTMKLKAILPSNLTSEVVSGKIQNLGLIRIIDYSLNDIPNKSEKYLIVTKCEVVSPALEMEITNVVKSEESEIFLTPKQENDCESEFKAENPGILLKPKPEMFAKSAAQIVNEQRSNLAPTARMAMTRRVHPLLSLNPYQGNWTIKVRVTNKEVMRNYKNARGEGCVFNVELTDDDETQIQATMFNEAARKFYDKFELGKVYYISKGTLKVANKKFNTVKNDYEMTLNENSEVEEAINEATFVPVTKFNFVPIDMLGPYVNGKELVDVIGVVQNVSPTISIRRKINNETAPKREITIADETKKTVVVSLWNELATNVGQELLDMVDQSPVIAIKSLRVGDFQGVSLSSVSKSKLLVNPDIPEAKKLKLWFDSEGKGASMASAGSSLSPSSKNGARSMYSDRISLSYLIQNPSLGDDKIEKLNNVAAPMFFSIRAYISSIKPDQTMWYRACNACNKKVTDAIGSGFWCEGCQKSDGECSLRYIMVVRISDASGEVYLSLFNDEAEKVIGCTADELDKMKSQIGEENSYEMKLKEATWVPYLFRVSVSQNEYNNEKRQRITARAVAPVDFASESRLLLEAISGSRFSK | 634 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 4088092 | 4091311 | + | BLOR06733 | Blo15g00339 | 70739 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo15g00339 | 634 | PANTHER | REPLICATION FACTOR A 1, RFA1 | 6 | 628 | IPR004591 | GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310 | |
Blo15g00339 | 634 | CDD | RPA1_DBD_A | 180 | 283 | - | - | |
Blo15g00339 | 634 | Pfam | Replication factor-A protein 1, N-terminal domain | 10 | 103 | IPR007199 | GO:0003677|GO:0005634|GO:0006260 | |
Blo15g00339 | 634 | SUPERFAMILY | Nucleic acid-binding proteins | 475 | 628 | IPR012340 | - | |
Blo15g00339 | 634 | Pfam | Replication factor-A C terminal domain | 477 | 623 | IPR013955 | - | |
Blo15g00339 | 634 | Gene3D | - | 10 | 116 | IPR012340 | - | |
Blo15g00339 | 634 | CDD | RPA1_DBD_C | 474 | 628 | IPR013955 | - | |
Blo15g00339 | 634 | CDD | RPA1_DBD_B | 313 | 419 | - | - | |
Blo15g00339 | 634 | Gene3D | - | 440 | 629 | IPR012340 | - | |
Blo15g00339 | 634 | SUPERFAMILY | Nucleic acid-binding proteins | 178 | 288 | IPR012340 | - | |
Blo15g00339 | 634 | Pfam | OB-fold nucleic acid binding domain | 191 | 277 | IPR004365 | GO:0003676 | |
Blo15g00339 | 634 | PANTHER | REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT B-RELATED | 6 | 628 | - | - | |
Blo15g00339 | 634 | Gene3D | - | 177 | 286 | IPR012340 | - | |
Blo15g00339 | 634 | Gene3D | - | 291 | 430 | IPR012340 | - | |
Blo15g00339 | 634 | SUPERFAMILY | Nucleic acid-binding proteins | 22 | 108 | IPR012340 | - | |
Blo15g00339 | 634 | TIGRFAM | rpa1: replication factor-a protein 1 (rpa1) | 20 | 628 | IPR004591 | GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310 | |
Blo15g00339 | 634 | Pfam | Replication protein A OB domain | 309 | 405 | IPR031657 | - | |
Blo15g00339 | 634 | SUPERFAMILY | Nucleic acid-binding proteins | 296 | 423 | IPR012340 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo15g00339 | Blo-Chr15:4088092 | Blo16g00969 | Blo-Chr16:37955158 | 2.22E-91 | dispersed | |
Blo15g00339 | Blo-Chr15:4088092 | Blo06g01214 | Blo-Chr6:35741905 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo15g00339 | K07466 | - | qsu:112017680 | 925.62 |