Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00341 ATGTCTGCGAAGCTTCTACATTCGTTAGCAGAGGATAACTCTGATTTGCAGAAGCAAATAGGGTGCATGACAAGCATTTTTCAACTATTCGATCATCAGCATATGCTCACTGGCAAGCGCACTCCCCACAAGAGGCTTCTTCTTGGTAATTCCCGCTCAGACAATGGAAACATGAGAAGAGAGCATAGCATTGCGCACCACGGGGGGAACGTCAAGGAATCTACTGGGAATAGGAGTGTAGACGAGGGACAAAGGGTGGTCACAGAATCATCTGGAGCTTCATTTTCCTCTTCTTGTTCATCATCCTTTTCGTCCATGGAATTTAACAGGGCATCTCTACCGGAAGCATCGTCCTTTGACCGAATCATATTCTCTCGGACTCCATCAAAAGGCCCTGACTCACCTGATCTTCGTGATGTAGTAAAGGAGTGCATGTATAGGGAAGCTAGAACATTACCCGTCAAGTCAAACGAAGAGAAAACAGTCAATAATTTGAGTAAGCATAGAGATTCTTCCAGGTCTTCTCAGTCTAAAGATGGATCTTCCAAAGTTTCTATAAATGCGAAGAAAAACACAACTATAGATCTTGATGAGTCTCTTAAAGTTCTCGCTAAACTTCGAGATGTGCCGTGGTATTACAACGAAGCAAAACAACTCCAGATATTGTCATACGAAGTGAAAGATGGGACTCGGCATTCTGGCTCGAGGGATGTTCCTCGTTTTTCTTATGACGAGAAAGAGAGAATTCGATTATCATTTGAAGCCATCAAGTCCACTCCGAAACAAAAGGAGCTGCCAAGACTCTCACTAGACAGTAGAGAGGGCTCAATGAAGTCCATGCCTTCTCATCTTTCTAGAAACTTTCAGAGTAATGGCTTCTCAAATGAGAAAGGCCCTCAGGAACGGGTCCTGGGTGTTGTAGCAAAGTTGATGGGATTAGACGTCCTCCCACATTCATCCTCGGCTAGTAGCGAAAAAACATCGAATAAGGTGAGTCTGATCAGGACTGTTGAAACAGTGGATTTCCCTACAAATCCAGTGGAAGTATCAACTTCACTTCAGCGAAAAAGTGAGGGTAGAATGATGAAACCTATTCAGAGTTCAAAGCTTCCACTTGAAAGCGCACCATGGCGCCAATTTGATGGAAATCGAGGCTCTTCCAAACCTTCCCTGCGAGCAAATTCCTCTCCTGTTTATAGTGAGATTGAGAAGAGATCGAAGAATATTGAGTTCAAGCAATCTGGAAAAGATCTTAGAGCTCTAAAACAGATTCTAGAAGCCATGCAATCCAAGGGATTGTTAGGGCCTGAAAGCGAAGGAGGAGGTTCAAATATGATTTTTCAAAAAGATTATGAACCAAACTCTGCAAGTCCAAGGCAGATTAATGGAGTGATTGTCCATCGAAACAAACAGAGCAACCAAGTTATGGGATCGACAACTCATGAACCTTATTCTTCATCGGCTCTTGAATCCCAAATTGTTGTTATGAAACCAGCAAGTCTAATGGGAGAATCCAATATTTCAGTTTCGTCAGTAATCCAAAAAGGCAGCCATCGATGGCTTCCAGACGTTAAAAAGAAGGCCTCTAACAGAGTCCTTAAGGACCAGTCACCTAGGAAAAGTATCAGGGATTCTTCTAGTTCTACTTCATGTGAGAAGAGGCCAAATACAAGGAACGTGACTTTACCCCAACCTTCTTCAAAATCTCAACAATTTGGCCAAGAAAGTACTTTAGGTTCAGTGAAGATCTCCGGATCTTTGAGCCCGAGACTTCAGCAGAAGAAACCCGAGCCAGAGAATCGATTTCGTCCACCTACCACTCGTCACTCAGACAAACCGAGAAGGACATTCAATGGACGGGCAACAAATTTGAGCTCCCCTAGTGGAACATTGAGGCGTAGAGCTTGCAGCCTATTGCAAAGTGATGATCAATCGAGTGAGATAAGCAATTCATCGAGAAGTTTGAGTTATACAGGGGATGAAATATCTCAACTTTCAGACGACAATTTATTGTCACATCCAAAGATGAATATAGAGTCAACGAGTAGTATCCTGCCTGCCAAGTATGTGGTGAGCAGATCGATGAAAAAGAACTCAAATTTGAGGTGTGAAGAAGACGACCCACTGGTCATAATTTCCCCTGAACATCCAAGTCCTGTCTCGGTCCTTGATCCCTCAGCCTATAGAGATGATGAACTTTCTCCTGTAAAGAAGATATCAAATACCCTTAAAGGTGATCATAGTCTAGATGGTGACAATTTTTTTGTCGAAGATCAATGGAGGTCTCCATCAATGGCTTCTGTTCCAATCAATCATCAGAAATTACAAAACATAGACAATCTGGTTCAGAAACTCCGAGGCCTTAACTCTCATCACGATGAAGAGAAAAGAGATTACATCGCATTACTCTGTGAGAACACAAATCCAGACTTTCGATACATTTCAGAGATTTTATTGGCTTCTGGACTCTTACTCCAAGACCTCAGCTCTGGCATGAAAACTTTTCAGCTTCACCCATCAGGTCATCCGATAAACCCAGAATTATTCTTCGTATTGGAACAAACCAAGGCAAGCATTTTGTCTTCAAAAGAAGGAAACAACCTTCTAGGAGCAGCTGAGAAATCTCGTCGAAAACTCATTTTCGATGTCGTCAACGAAATTCTAGCTTGGAAATTAAAACCCATTAGCATTTCTTCGGAGCGGTTCTTGACACCAAACAGGGTCGGAAGCAAAACTCTTACTGCTCAAAATCTTCTGAAGAAATTGTGTTGTGAAATAGAGCAATTTCGAGCCAAGAGCTTAGATGAGGAAGATGACAGGTTGAAAAACTTCTTGCGTGCAGATTTGATGAATCGTGAAGAACATTGGATGGATTTCCACGACGAGATTTCTGGGGCTGTTCTGGACATCGAGCGAATGATCTTCAAAAACTTGGTCGATGAGATTGTCGTGTGCGAGGGAGCCTATTTACGAGCTAAGTCGGGAAGGGAGGTATCAGAACAAAAGTTTCAACAATTGCCTACTCGCCACGATAGACTAGAAGCTACAGTTCATAATATGGCTCAAGATTTTGCAATTAAGCATGAAGTAGTTATGGCTGCTTTTGCACAACTGTTGCCAAATCGACCAAAAGCATCCCCTGGTGCAGTTGCCACATATAATATTCTGTCTAGTTCTCAGTTTCCGCTAACAGGAGACGGACCAAGAGAATGGTTGAGGGAAGCAAATAGGTTTTTCCTTATGCAACAAGTTCTTGTTCATTTGCGATTAGGAATGGTGGAAATGCATTTACAAGACCAAGTTGATATTTGGTTTGATGGTTTTATATCAACTCATCCTCATGCTACTTGGGATTTGTTTGCCAATGAATTGTGTTGTAGATTTTCTGCTTCCAACATCAAGAATGTAGATCTTCAGACTAATGTTCTTGACAGCACTGAAATGAAGAAAATTGCAATCTTAGTTACTATTGAGAAAGAAAACAAAATTGGAGATTTCAACCTCGACGACTTGCAAACTAATGTAGAAGTCATAGACGAGGTACGAGGCAAGAATGAGTTAACAGCTGGAAACTTGAATCAAATTTCAGTAGCTTCAAAGGAGGAAGTTTGGCAGAAAGCAATGAACGAAGAAATCCATGGATTTATTGAAGAACCAGAAACCATTACTTACGTTTTGAATGAATTTTACGAGGAAAATCCTCCAGATGAATTTTATGGCAAATTTCTGCCGGTGGAGGCAGAGAAAGCAGAGGTTTCAGAAAAGGGAGAGTCGGAAATTCTCAGCGATAAAGGACATGGAGACTCAGAGGAAGAAGACGAGTTTGGATCGGAGAATAGTAACAAAATTCCTTTTGGAGAAGAAGGTTTTCGAGAAGTTAACTTTGTAAGGGAAGCTATGGATGAAGAGAAATGGGACTACTTCGTCGAAGGATTAGGTGCTGAACAACAAATGAAGCACGAAATTGAGCATGATGATGAAAAAGATTATCAGTTATTTACCAACTTGCCTGAAGTTCTTCATAGTCCTAAGCACTCTTTCGAGACAAGTTTCAGATTCGTAGATCACAACTTGGTGTCACCAGAAATTACATCAAGGAGGAGTATTAAAAAAGTACTTTTATGTGATATGATGTGA 4137 41.48 MSAKLLHSLAEDNSDLQKQIGCMTSIFQLFDHQHMLTGKRTPHKRLLLGNSRSDNGNMRREHSIAHHGGNVKESTGNRSVDEGQRVVTESSGASFSSSCSSSFSSMEFNRASLPEASSFDRIIFSRTPSKGPDSPDLRDVVKECMYREARTLPVKSNEEKTVNNLSKHRDSSRSSQSKDGSSKVSINAKKNTTIDLDESLKVLAKLRDVPWYYNEAKQLQILSYEVKDGTRHSGSRDVPRFSYDEKERIRLSFEAIKSTPKQKELPRLSLDSREGSMKSMPSHLSRNFQSNGFSNEKGPQERVLGVVAKLMGLDVLPHSSSASSEKTSNKVSLIRTVETVDFPTNPVEVSTSLQRKSEGRMMKPIQSSKLPLESAPWRQFDGNRGSSKPSLRANSSPVYSEIEKRSKNIEFKQSGKDLRALKQILEAMQSKGLLGPESEGGGSNMIFQKDYEPNSASPRQINGVIVHRNKQSNQVMGSTTHEPYSSSALESQIVVMKPASLMGESNISVSSVIQKGSHRWLPDVKKKASNRVLKDQSPRKSIRDSSSSTSCEKRPNTRNVTLPQPSSKSQQFGQESTLGSVKISGSLSPRLQQKKPEPENRFRPPTTRHSDKPRRTFNGRATNLSSPSGTLRRRACSLLQSDDQSSEISNSSRSLSYTGDEISQLSDDNLLSHPKMNIESTSSILPAKYVVSRSMKKNSNLRCEEDDPLVIISPEHPSPVSVLDPSAYRDDELSPVKKISNTLKGDHSLDGDNFFVEDQWRSPSMASVPINHQKLQNIDNLVQKLRGLNSHHDEEKRDYIALLCENTNPDFRYISEILLASGLLLQDLSSGMKTFQLHPSGHPINPELFFVLEQTKASILSSKEGNNLLGAAEKSRRKLIFDVVNEILAWKLKPISISSERFLTPNRVGSKTLTAQNLLKKLCCEIEQFRAKSLDEEDDRLKNFLRADLMNREEHWMDFHDEISGAVLDIERMIFKNLVDEIVVCEGAYLRAKSGREVSEQKFQQLPTRHDRLEATVHNMAQDFAIKHEVVMAAFAQLLPNRPKASPGAVATYNILSSSQFPLTGDGPREWLREANRFFLMQQVLVHLRLGMVEMHLQDQVDIWFDGFISTHPHATWDLFANELCCRFSASNIKNVDLQTNVLDSTEMKKIAILVTIEKENKIGDFNLDDLQTNVEVIDEVRGKNELTAGNLNQISVASKEEVWQKAMNEEIHGFIEEPETITYVLNEFYEENPPDEFYGKFLPVEAEKAEVSEKGESEILSDKGHGDSEEEDEFGSENSNKIPFGEEGFREVNFVREAMDEEKWDYFVEGLGAEQQMKHEIEHDDEKDYQLFTNLPEVLHSPKHSFETSFRFVDHNLVSPEITSRRSIKKVLLCDMM 1378
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 4147090 4157732 - BLOR06735 Blo15g00341 70741

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00341 1378 MobiDBLite consensus disorder prediction 1250 1283 - -
Blo15g00341 1378 MobiDBLite consensus disorder prediction 275 297 - -
Blo15g00341 1378 Pfam DUF761-associated sequence motif 305 321 IPR032795 -
Blo15g00341 1378 MobiDBLite consensus disorder prediction 1250 1271 - -
Blo15g00341 1378 Pfam Domain of unknown function (DUF4378) 810 981 IPR025486 -
Blo15g00341 1378 MobiDBLite consensus disorder prediction 433 458 - -
Blo15g00341 1378 MobiDBLite consensus disorder prediction 272 297 - -
Blo15g00341 1378 MobiDBLite consensus disorder prediction 523 631 - -
Blo15g00341 1378 PANTHER LONGIFOLIA PROTEIN 1 996 IPR033334 GO:0051513
Blo15g00341 1378 MobiDBLite consensus disorder prediction 542 593 - -
Blo15g00341 1378 MobiDBLite consensus disorder prediction 152 176 - -
Blo15g00341 1378 MobiDBLite consensus disorder prediction 617 631 - -
Blo15g00341 1378 MobiDBLite consensus disorder prediction 594 616 - -
Blo15g00341 1378 MobiDBLite consensus disorder prediction 152 186 - -
Blo15g00341 1378 MobiDBLite consensus disorder prediction 523 541 - -
Blo15g00341 1378 MobiDBLite consensus disorder prediction 350 399 - -
Blo15g00341 1378 PANTHER PROTEIN LONGIFOLIA 2 1 996 - -
Blo15g00341 1378 Coils Coil 778 798 - -
Blo15g00341 1378 MobiDBLite consensus disorder prediction 380 399 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00341 - - - qsu:112017678 830.861
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo04g00797 Blo15g00341 CCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00425 Blo-Chr1:4821028 Blo15g00341 Blo-Chr15:4147090 1.85E-62 dispersed
Blo15g00341 Blo-Chr15:4147090 Blo16g01116 Blo-Chr16:39645882 7.40E-40 dispersed
Blo10g00011 Blo-Chr10:141926 Blo15g00341 Blo-Chr15:4147090 4.12E-06 transposed
Blo10g00163 Blo-Chr10:1947308 Blo15g00341 Blo-Chr15:4147090 1.69E-59 wgd
Blo15g00341 Blo-Chr15:4147090 Blo04g00797 Blo-Chr4:7980085 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g459 Blo04g00797 . Bda06g00519 Bda15g00627 . . . Bma12g00962 Cmo13g01113 . . Cma11g00213 . Car11g00192 Sed08g0284 . Cpe04g01455 Bhi02g00090 Tan09g2035 Cmetu02g0174 . Hepe09g0278 . . Cla06g01534 Cam06g1692 Cec06g1755 Cco06g1754 Clacu06g1660 Cmu06g1606 Cre06g2418 Cone2ag0795 Cone16ag0214 Cone13ag0031 Cone19ag0040 Lsi02g00125 Csa01g00608 Chy12g01492 Cme12g01932 . Blo15g00341 Bda11g01764 Bda14g00886 Bpe07g00753 Bpe15g00573 Bma03g00858 . Sed08g2125 . Cmo11g00215 Cma13g01068 . Car13g00904 Car18g00008 . . Bhi08g01076 Tan05g2350 Cmetu12g0276 Lac10g0173 Hepe07g2455 . . Cla04g01147 Cam04g1203 Cec01g1715 Cco01g1760 Clacu04g1230 Cmu04g1210 Cre01g1506 . Csa01g00300 Chy02g02436 Cme02g01823
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003334 4 1 2 2 3 1 2 1 1 1 1 1 2 1 1 2 1 4 2 1 1 1 2 1 1 1 1 2 3 2 49
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo15g00341 Blo_Chr15 FPKM 21.600471 22.073174 16.73057 18.411194 20.141756 19.056648 19.110298 15.197716 13.985029 16.608507