Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00345 ATGGAGTCTGTGTTCTTGGTTGGAACCAAATCCATCGCCAAGCTTGTCCTCCTACTTCTACATTCGTGCCTCACTTTTACTTCAGCAGAGGCCTATAATTCTCGTGATCGAAATGCCAATGTCACAATCAAATGGGATATATTGTCATGGACTCCAGATGGTTATGTGGCTGTCGTTACGATGTCAAATTTCCAAAAATATCGCAGTATTCCTGCCCCGGGTTGGACGTTAGGATGGACGTGGGCGGAGAAGGAAGTAATATGGAACATGATTGGTGCCCAAACAACAATGCAAGGGGATTGTTCTAGATTCAAAGGCAACATCCCTCATTCCTGTGAAAATAATCCGATGGTCGTTGATTTACTTCCCGGAGTTCCTTATAACCAGCAAATTGAAAATTGTTGCAAAGCCGGCGTTTTGTCACCTTGGCGTAAGGGCCAAAAAGCCTCAATCTCGGCCTTTCAGCTAAGTGTTGGGCTAGCGGGAACGACGAATAGAACAGTAAAGTTGCCGAGGAAGTTCACTCTGCTCGGTCCAGGTCCTGGATATATTTGTGGCTCAGCAAATGTTGTTCCATCAACGAAATTCCTCACCCCCGATCGCAAGCGGGTTACTCAAGCACAGAAGGCCTACGATTCCCTTGATCCAACCGGAAATATCACAATCAAATGGGATGTAATAAGCTGGACTGCAGATGGTTATGTTCTGAATATTTGTTTTTCATGCCAACCAAAGGTATCCTCAGGTGTTTGTGTCCGGAGGCTAATCGCTGTCGTCACGATGTACAATTTCCAGCAATATCGCCATATTCAAGCCCCGGGTTGGAGTTTAGGGTGGACATGGGCAAAGAAGGAAGTAATCTGGAGCATGATGGGCGGCCAAACAACGGAGCAAGGAGATTGCTCCAAATTCAAAGGCAATGTTCCCCATTGCTGTAAAAAGGATCCAACGGTTGTGGATTTACTTCCCGGAACGCCTTACAACCAGCAGATTGCAAATTGTTGCAAAGGCGGTGTGATAAACTCGTGGGTCCAGGACCCGTCCAATGCAGCTAGCTCGTTCCAGGTCAGCGTTGGTTCGGCCGGAACGACTAACAAAACGGTCAGAGTGCCGAAAAACTTTACACTTAGAGCACCTGGCCCCGGCTATACTTGTGGGCCTGCAAAGATCGTGAAACCGACTAAATATTTATCGGCCGATACGAGAAGAACGACGCAAGCTCAGATGACGTGGAACATTACTTGCACGTATTCGCAATTTCTCGCTCAAAAGACGCCAACCTGTTGTGTTTCTCTCTCGTCCTTCTACAACGACACCATCGTAAACTGCCCAACGTGCACTTGCGGCTGTCAGAACAACATAACAAATCCCGGGAGTTGTGTCGACCCAGATTCTCCATACTTAGCCTCGGTTGTATCGAGTCAAAAATCGAGTAATACTCTTGTTCAGTGTACGAGTCATATGTGTCCGATTAGAGTCCATTGGCATGTGAAGCTCAATTACAAGGAATATTGGAGGGTGAAGATCACAATCACGAATTTCAACTACCGAATGAATTACACGTTGTGGAATCTCGTTGTTCAACACCCGAATTTCGATAATCTTACTCAGTTGTTCAGCTTTAATTACAAGTCGCTAACTCCCTATGAAGGCCTAAACGATACCGCTATGTTGTGGGGTGTCAAGTTTTACAACGATTTGCTGATGGAGGCAGGCCCTCTCGGAAATGTACAATCCGAACTACTATTCCGAAAAGATAAAAATACCTTTACTTTCGATAAGGGTTGGGCGTTTCCGAGGAGAATTTATTTCAACGGCGATAACTGTGTGATGCCACCTCCAGATGCGTATCCATGGCTGCCTAATACAAGTTCCCGACAAGCGATTTCGATACTTAATTATTTCATTATCATGGCGGTTTTGGTGTTCCTATCGGCCTACCCGGAGGGAGCTCGCCTCCAGTGCGCTCCAGGCAACGGTCTAGAGACCGTTGCCATCGCCCCTCGCCAACGGTCTTCAGACCGTTGCAAGAAACGGTCTGAAGACCGTTGCTTCTCTAGTCGGCGAGCTCTGTCTTGCCGGCGATCGCCATTGACGCAGTCCTCGTCGTCGCGACTCTGTCCTCGTCGTCACGAGCCCGGTCCTTCACGCGAGCTCTATCCCCGTCGTCGCGAGCTCCGTCCCCGTCGTCGCGACTTGTCAGCTCAGGCCAGAGGTGTCCCCGTCGTCGTGGTGTCTCGTGAGCTCGGGCTCACTGAAGATCTGGCGGGCTGGCTCGCCTGCTGGCTAGCCGGGCCAGCCCGCCAGGCTCGCGAGCCAGCCCGCCAGGCAGGCTCGCGAGCCAGGCTCGCCGAGCTCGCGAGTCCGGGTGCTCGGGCTCGGCTCGGCCCGTCTACCGGGCCCGAGCTGAGCCCGCTCGATACTGTAACGATCCGAGCCGAGCTCGGATCGCTACAGTACCGAGCCGAGTGGGCGGGCTGGTAG 2484 50.72 MESVFLVGTKSIAKLVLLLLHSCLTFTSAEAYNSRDRNANVTIKWDILSWTPDGYVAVVTMSNFQKYRSIPAPGWTLGWTWAEKEVIWNMIGAQTTMQGDCSRFKGNIPHSCENNPMVVDLLPGVPYNQQIENCCKAGVLSPWRKGQKASISAFQLSVGLAGTTNRTVKLPRKFTLLGPGPGYICGSANVVPSTKFLTPDRKRVTQAQKAYDSLDPTGNITIKWDVISWTADGYVLNICFSCQPKVSSGVCVRRLIAVVTMYNFQQYRHIQAPGWSLGWTWAKKEVIWSMMGGQTTEQGDCSKFKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVINSWVQDPSNAASSFQVSVGSAGTTNKTVRVPKNFTLRAPGPGYTCGPAKIVKPTKYLSADTRRTTQAQMTWNITCTYSQFLAQKTPTCCVSLSSFYNDTIVNCPTCTCGCQNNITNPGSCVDPDSPYLASVVSSQKSSNTLVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYRMNYTLWNLVVQHPNFDNLTQLFSFNYKSLTPYEGLNDTAMLWGVKFYNDLLMEAGPLGNVQSELLFRKDKNTFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNTSSRQAISILNYFIIMAVLVFLSAYPEGARLQCAPGNGLETVAIAPRQRSSDRCKKRSEDRCFSSRRALSCRRSPLTQSSSSRLCPRRHEPGPSRELYPRRRELRPRRRDLSAQARGVPVVVVSRELGLTEDLAGWLACWLAGPARQAREPARQAGSRARLAELASPGARARLGPSTGPELSPLDTVTIRAELGSLQYRAEWAGW 827
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 4346480 4357802 - BLOR06739 Blo15g00345 70745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00345 827 PANTHER COBRA-LIKE PROTEIN 208 238 - -
Blo15g00345 827 MobiDBLite consensus disorder prediction 695 732 - -
Blo15g00345 827 PANTHER PROTEIN COBRA 255 644 IPR006918 GO:0010215|GO:0031225
Blo15g00345 827 MobiDBLite consensus disorder prediction 710 732 - -
Blo15g00345 827 PANTHER PROTEIN COBRA 11 207 IPR006918 GO:0010215|GO:0031225
Blo15g00345 827 PANTHER PROTEIN COBRA 208 238 IPR006918 GO:0010215|GO:0031225
Blo15g00345 827 PANTHER COBRA-LIKE PROTEIN 11 207 - -
Blo15g00345 827 PANTHER COBRA-LIKE PROTEIN 255 644 - -
Blo15g00345 827 Pfam COBRA-like protein 256 418 IPR006918 GO:0010215|GO:0031225
Blo15g00345 827 Pfam COBRA-like protein 55 211 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00166 Blo-Chr10:1974172 Blo15g00345 Blo-Chr15:4346480 8.26E-65 dispersed
Blo11g00321 Blo-Chr11:2614081 Blo15g00345 Blo-Chr15:4346480 3.53E-78 dispersed
Blo13g00525 Blo-Chr13:26825643 Blo15g00345 Blo-Chr15:4346480 7.40E-32 dispersed
Blo11g00261 Blo-Chr11:2112948 Blo15g00345 Blo-Chr15:4346480 3.87E-14 transposed
Blo10g00164 Blo-Chr10:1961135 Blo15g00345 Blo-Chr15:4346480 7.12E-79 wgd
Blo15g00345 Blo-Chr15:4346480 Blo06g01207 Blo-Chr6:35642734 4.20E-88 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00345 - - qsu:112009790 789.26