Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00366 ATGCTCGAAGCAAAAGAGATAGCCGCAACGGCACCGGATCCCCGTCAATCCGACTCTCTTCCTGCAACTAGAGCGGGGGAGGAGAAAATGGCTTGGAGGAGAGTGTTGAAGGCTGTACAGGCACTGGTGGCCCACTGTTCTCTCTTTTGCTTCACACTGCTGCTCGTTTTCAAGCTCGATCACCTAGTTTCCTATAGTTGGTGGGTAATTTTTTTCCCGCTGTGGGCCTTTCATGCAGTCGTTGCTCGTGGAAGATTCTCATTACCCGCTCCGTTAGTTCCACACAATCGCAATTGGGCACCTTGCCATGCCGTTGTTGCCATGCCATTGCTTGTTGCATTTGAATTGCTTCTTTGTATATATCTTGAGAGCACATATGTACATGGTTTTCCAGAAGTCAGTTTGAAGATTGTCTTTCTTCCATTATTGGCATTCGAAATGACTATTTTAATTGATAATTTCAGGGCTCTTATCCCGGGTGATAATGAAGGCTTGAGTGATGAGGCTATATGGGAGACTCTTCCTCACTTCTGGGTTGCAATTTCTATGGTCTTCTTTGTTGCTGCTACTATCTTCACCCTCCTAAAGCTATGTGGCGTTGTTGGTGCCCTTGGCTGGTGGGACTTGTTTATAAATTTTGGTATTGCTGAGTGCTTTGCATTTCTTGTCTGTACAAAGTGGTCTAATCCTATTATTCACAGAAATACTAGCAGTGGAGAAGCAACTTCTTCTTCTATGATTATTAGATATCTTGATTGGGGCAGTGGTTTAATATTCTCCCCCCAGCAAGATGAACAACAAGATAGAATATGTGGCCTTCAAGACATTGGAGGCCATATAATGAAAGTTCCGATTATTGGCTTCCAAATCCTCCTTTGCATGCGCCTAGAGGGAACTCCTGCTAATGCTAAATATATACCACTCCCAGTTCTTTTTTCGCCTCTTTTTCTGCTGCAAGGTGCTGGTGTATTATTTTCAGCATTGATATTGGTGGAGAGGATTGTTCTTCTCTGGCGAAGTGGATTTGGCTCTGGGTGGTATTTCAGATTTTCTTCAAAAGCCAACGAATGTTTTGAGTTCTTTCATCGTGGATCAAGGCTTTTGGGTTGGTGGTCAATTGAAGAAGGAAATCGTGAGGAACTGGCCCGATTATTTCATGAAGCAGCATCTGGGTATAATACGTTCTCGGGTTATCCTCCTGAGATTGTCAAAAAAATGACCAAGAAAGATCTTGCTGAGGAGGTCTGGAGGCTTCAAGCTGCTCTTGGCGAGCAGACTGAAATCACGAAATACAGCCGTCAGGAGTACGAAAGACTTCAGAATATGAACATAGTGTATCTGAGCATGTTTTCAAAATTTGCTTTCAGAACATTCTTAAAAACTGTGTTCTAG 1392 43.39 MLEAKEIAATAPDPRQSDSLPATRAGEEKMAWRRVLKAVQALVAHCSLFCFTLLLVFKLDHLVSYSWWVIFFPLWAFHAVVARGRFSLPAPLVPHNRNWAPCHAVVAMPLLVAFELLLCIYLESTYVHGFPEVSLKIVFLPLLAFEMTILIDNFRALIPGDNEGLSDEAIWETLPHFWVAISMVFFVAATIFTLLKLCGVVGALGWWDLFINFGIAECFAFLVCTKWSNPIIHRNTSSGEATSSSMIIRYLDWGSGLIFSPQQDEQQDRICGLQDIGGHIMKVPIIGFQILLCMRLEGTPANAKYIPLPVLFSPLFLLQGAGVLFSALILVERIVLLWRSGFGSGWYFRFSSKANECFEFFHRGSRLLGWWSIEEGNREELARLFHEAASGYNTFSGYPPEIVKKMTKKDLAEEVWRLQAALGEQTEITKYSRQEYERLQNMNIVYLSMFSKFAFRTFLKTVF 463
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 4879591 4887724 + BLOR06760 Blo15g00366 70766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00366 463 PANTHER TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN 30 450 - -
Blo15g00366 463 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 30 450 - -
Blo15g00366 463 Pfam Transmembrane Fragile-X-F protein 58 318 IPR019396 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00483 Blo-Chr1:5289001 Blo15g00366 Blo-Chr15:4879591 3.11E-27 wgd
Blo15g00366 Blo-Chr15:4879591 Blo06g01191 Blo-Chr6:35375507 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00366 - - tcc:18604055 694.501