Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00369 ATGCCGATGAGGAAGGGAGAAATAAGGGAGACGGGAGTTCGCCTGCAACGACTAGCACAAAGACGGCGAACGGGCAACGCTGTCCTACTGCATGGCGACTTCCCGGCGAGTAGGCTGCGAGTGACGAGGAACGGTTGGACGGTGGCAGTTCGGGCTCGGAATCGGACCTCTTCCGCGATGAGTTTTTCGGCGACGATTAGAGGTAGGCTTGGTCGATTTCTTCCTCCTCCTTTGCTTTCGGGTTTTCATGTGTTGGCAAGGAGCGATTACAAGATGCGATTTCAGGCAATGTTGGCGTCGGCCAGGAGCGAATTCACGACGGGCAGAGGGGTGGATTTCGGACAGGAACGAGTCTTCCACGTTGGCCCCCTTCCAGCTGGATTGTACACTGCCGACACTGAGGGAATTGATGAGGTTGTCAAAGCTTTGAAGAAGTTGTCGGGTGAATGGCTGTCGGTGGCTGGCTGCAGTGAAATTGGAGCAGAGAGTTCGATCCGCTCTCCGTCTTTGATCGATACCGGTAATCTTTTAACTGCCGGGGCAGAGATCAGCATTCCGGCGATGGAAGCTCCGCAAGCTGGATCCGAGAAGGACAAAGCTGCCAATCCTTTGTCCTCATCATCCTCTTCTCCGGTATCGGTTGTCTCCGACTTCTGGAAAGATTTTGATTTAGAGAAAGAGAAAGGAGTGTTGGATGAGCAAGGTCTTCGGATTGCTGAAAACCAAGAAAATAGCTTGAAAAATAGACGAAAGCTTGCAGAAAGTACAAGAGATTTCAGGAAAGCTTCGCCAGAGGAGAAGTTAAATTTATTTAATTCTCTGATTAAATGTTTCCAAGAAGAAGTTGATAACATTACCAAGCGAGCAAAGTTTGGAGAAAATGCTTTCCTTAACATCTATCAAAAACTTTATGAGGCTCCAGATCCTTATCCCGCTATTGCTTCAATTTCTGGGCAAGAGGCTAAATTATCTGATCTGGAGTCTGAAAATCGGAAAATGAAAGTTGAGCTTGAGGAATTTAGGACAGAATCTTCTCATCTAAAGAATCAGCAGGCAACAATAAGGAGACTTGAAGAACGCAATCGACAATTGGAGCAACAGATGGAAGAAAAAATCAAAGAGATAGTGGAGATCAGGCAACGCAGTTTGGCAGAAGAGAATCAGAAAACATTTGATGTTTTGAAAGAAAGGGAGCAATTGTTACAAGATCAATTAAGACAAGCTAAAGAAAGTGTCTCAAACATGCAAAAGATACATGAACTTGCTCAAAGTCAATTATTTGAACTTCGGGCTCAGTCAGAAGAAGAGAGGGCAGCTAAACAATCAGAGGTCAATCTTTTGATGGATGAAGTTGAGCGGGCTCAAACAAGGCTTCTAAGCCTTGAAAGGGAGAAGGGACTTCTGCGTTCTCAGTTACAATCTGCAAATGAAGATGGTGGAAATAAGAAAAGTGATAATTTAGATTCCAGTAGTTTCCTCGAGAATTCTTTGAGTGCCAAAGAGAAGATTATCTCTGAATTAAACATGGAACTTCACAGCATTGAGACAACCTTGTCAAGTGAAAGGGAGCAACACATAAATGAAATCAAGATATTGAATGGAATTATAAATGAACAGGAAACTGCTCTTGATGAAATGAAGAAAGAGCTTCAGGGAAGGCCAACATCAAAATTGGTCGATGACTTGAGGAAAAAAGTTAAAATTTTGCAGGCTGTGGGTTATAATTCGATTGAGGCTGAAGATTGGGAAACAGCTACTAGTGCTGAAGAGATGAGCAAAATGGAGTCTCTTCTTCTTGATAAAAACAGAAAAATGGAACATGAACTTACACAATTGAAGGTTAAACTTTCTGAAAAGGAATTTTTGCTGGAAACAGCTGAAACCAAGATATCTGAACTCTTAGAGAAGGTTGCTGAACAACAGAAGTTAATACAGAAGTTGGAAGATGATATACTAAAGGGTTATAGCTCCAAAGATCAAAAAGGCACTCTCTTTGATGACTGGAATCTTTCTGAAGTCAGGGGGGTGGACCTGCCTGAGAATGCAGATAGAAAAAATCCGTCTACAGATCAAGATCAAAGTTCAATGCTTAAGGTAATTTGCAATCAGCGGGATAGGTTTAGGAGTCGCTTGCGAGAGACAGAAGAGGAAATAAGGCAATTGAAAGAGAAGATAGGGGATCTAACTGTGGAATTGGAAAAGACAAAAGCAGATAATGTCAAACTTTATGGAAAGATTCGTTATGTCCAGGACTATAATCTTGAGAAAGTAGTTTCTAGAGGATCAAAGAAGCATGCAGAGGATCTTGAAAGTGGTTTTGCATCAGATGTTGAATCCAAGTATAAAAAAATATACGAAGAAGATATTAATCCTTTTGCTGCATTTTCGAAAAGGGAAAGGGATCAAAGATACAAGGAGTTGGGTATCAGGGATAAAATCACGCTCAGTAGTGGACGATTTCTCTTGGGAAACAAATATGCTCGAACATTTGCATTTTTCTACACGATCGGATTACATATCTTAGTGTTCACATGCCTGTATCGAATGTCGGCTCTGAGCCATCTTAGCCATGGTTCTGATGATTCCTTTACTGGAGATAAAACCGTCAATCTGCCTCACGCAATGTGGAATTCAACATACGAAATGCTGACTTTAGCGGTGGATTGTAAAGAAATTGTTACTTTATATTGCACAGATGAAGTTTCGGCCATTGTCGTTGACCTTGGTTTACACACTTGTAAAGCTGGTTATGCTGGGGAAGACGCTCCCAAGGCTGTGTTTCCCTCCCGACATATTGTTATCGGCTCAATTGACCCAATGGAAGTTGACGACCCGGTGAACACTGACAAAAACTCTGTATCGGCAGTAGATTCTAAAATTAGTAAAAATATTGATTCAGAAAAACTGAAGGGTAAACGTAAATTATATGTTGGGTCTCAAGCATTAGGATTCCGACGAGATCACATGGAGGTGCTATCTCCTATAAAAGATGGTGTTGTTGTCGACTGGGATATGGTTGATAGCATTTGGGATCATGCCTTTAGGGAATGCCTTCTGGTTGATCCTAAAGAGCACCCAATGCTACTTGCTGAACCATCTTCTAACTCACAACAGCAGAGAGAAAGGACAGCAGAACTTATGTTTGAAAAACACAACGTTCCTGCATTATTTCTTGCAAAAAATGCAGTTCTCACATCTTTTGCATCTGGGCGTGCTACCTCCTTAGTTGTTGACAGTGGTGGAGGATCAACTACAGTTGCTCCAGTACATGATGGTTATGTTCTTCAAAAGGCTGTGTCATCTTCTCATATTGGAGGTGAAGTTCTGACTGATTGCTTGGTGAAAAGTTTGGAGAGCAAAGGTATCGTGATAAAGCCCAGGTACTCTTTCAAAAGAAAGGAAATACGTCCGGGAGACTTTCAGGCAGTGGATCTTGATTTTCCAAACACCACAGAGAGTTATAGACTTTACTCCCAGAGGTTAATTGCCAGTGATATCAAGGAATGTGTCTGTCGGGCCCCAGATTCTCCATACGATGAGAGTGCATATTCAAACATTCCAATGACCCCTTACGAACTTCCTGATGGCCAGACTATTGAAATTGGTGCTGATAGATTCAAGATTCCTGACGTTCTTTTTAATCCATCTCTTTTACAGACAATTCCTGGTATGGAGACTTTTGCTGAGACTGCATCTATGGTTCGTGGGCTGCCACAAATGGTTATAGAAAGCATAAACAAGTGTGATGTGGACATTCGAAGAGAACTTTTCAGTAGTATACTGCTTGCTGGGGGGACAGCGTCAATGCAGCAGTTGAAGGAGCGTCTTGAGAAAGACTTGCTAGAGGAGTCTCCCCAAGCTGCTCGTGTTAAAGTTTTAGCAAGTGGAAATGCAACGGAAAGAAGATTTAGTGTGTGGATTGGAGGTAGCATATTGGCTTCCCTTGGTTCATTTCAGCAAATGTGGTTCTCCAAGTCCGAGTTAGTATACTCTTCGGCAGCCATTTGA 4008 42.39 MPMRKGEIRETGVRLQRLAQRRRTGNAVLLHGDFPASRLRVTRNGWTVAVRARNRTSSAMSFSATIRGRLGRFLPPPLLSGFHVLARSDYKMRFQAMLASARSEFTTGRGVDFGQERVFHVGPLPAGLYTADTEGIDEVVKALKKLSGEWLSVAGCSEIGAESSIRSPSLIDTGNLLTAGAEISIPAMEAPQAGSEKDKAANPLSSSSSSPVSVVSDFWKDFDLEKEKGVLDEQGLRIAENQENSLKNRRKLAESTRDFRKASPEEKLNLFNSLIKCFQEEVDNITKRAKFGENAFLNIYQKLYEAPDPYPAIASISGQEAKLSDLESENRKMKVELEEFRTESSHLKNQQATIRRLEERNRQLEQQMEEKIKEIVEIRQRSLAEENQKTFDVLKEREQLLQDQLRQAKESVSNMQKIHELAQSQLFELRAQSEEERAAKQSEVNLLMDEVERAQTRLLSLEREKGLLRSQLQSANEDGGNKKSDNLDSSSFLENSLSAKEKIISELNMELHSIETTLSSEREQHINEIKILNGIINEQETALDEMKKELQGRPTSKLVDDLRKKVKILQAVGYNSIEAEDWETATSAEEMSKMESLLLDKNRKMEHELTQLKVKLSEKEFLLETAETKISELLEKVAEQQKLIQKLEDDILKGYSSKDQKGTLFDDWNLSEVRGVDLPENADRKNPSTDQDQSSMLKVICNQRDRFRSRLRETEEEIRQLKEKIGDLTVELEKTKADNVKLYGKIRYVQDYNLEKVVSRGSKKHAEDLESGFASDVESKYKKIYEEDINPFAAFSKRERDQRYKELGIRDKITLSSGRFLLGNKYARTFAFFYTIGLHILVFTCLYRMSALSHLSHGSDDSFTGDKTVNLPHAMWNSTYEMLTLAVDCKEIVTLYCTDEVSAIVVDLGLHTCKAGYAGEDAPKAVFPSRHIVIGSIDPMEVDDPVNTDKNSVSAVDSKISKNIDSEKLKGKRKLYVGSQALGFRRDHMEVLSPIKDGVVVDWDMVDSIWDHAFRECLLVDPKEHPMLLAEPSSNSQQQRERTAELMFEKHNVPALFLAKNAVLTSFASGRATSLVVDSGGGSTTVAPVHDGYVLQKAVSSSHIGGEVLTDCLVKSLESKGIVIKPRYSFKRKEIRPGDFQAVDLDFPNTTESYRLYSQRLIASDIKECVCRAPDSPYDESAYSNIPMTPYELPDGQTIEIGADRFKIPDVLFNPSLLQTIPGMETFAETASMVRGLPQMVIESINKCDVDIRRELFSSILLAGGTASMQQLKERLEKDLLEESPQAARVKVLASGNATERRFSVWIGGSILASLGSFQQMWFSKSELVYSSAAI 1335
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 5036949 5062803 - BLOR06763 Blo15g00369 70769

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00369 1335 Coils Coil 316 381 - -
Blo15g00369 1335 Gene3D - 1077 1280 - -
Blo15g00369 1335 PANTHER HOMEOBOX PROTEIN CUT 211 859 - -
Blo15g00369 1335 Coils Coil 504 524 - -
Blo15g00369 1335 Coils Coil 529 549 - -
Blo15g00369 1335 SUPERFAMILY Actin-like ATPase domain 899 1077 IPR043129 -
Blo15g00369 1335 MobiDBLite consensus disorder prediction 199 213 - -
Blo15g00369 1335 Pfam Actin 899 1327 IPR004000 -
Blo15g00369 1335 Gene3D - 896 1076 - -
Blo15g00369 1335 Coils Coil 236 256 - -
Blo15g00369 1335 MobiDBLite consensus disorder prediction 190 213 - -
Blo15g00369 1335 PANTHER CCAAT DISPLACEMENT PROTEIN-RELATED 211 859 - -
Blo15g00369 1335 Coils Coil 430 478 - -
Blo15g00369 1335 Gene3D - 1287 1335 - -
Blo15g00369 1335 Gene3D Actin; Chain A, domain 4 1106 1219 - -
Blo15g00369 1335 Coils Coil 616 650 - -
Blo15g00369 1335 CDD NBD_sugar-kinase_HSP70_actin 993 1108 - -
Blo15g00369 1335 Coils Coil 697 738 - -
Blo15g00369 1335 Pfam CASP C terminal 625 852 IPR012955 GO:0006891|GO:0030173
Blo15g00369 1335 SUPERFAMILY Actin-like ATPase domain 1070 1327 IPR043129 -
Blo15g00369 1335 Coils Coil 391 418 - -
Blo15g00369 1335 SMART actin_3 901 1335 IPR004000 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00369 K09313 CUTL; homeobox protein cut-like - rcu:8286730 1112.83
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00019 Blo-Chr1:301497 Blo15g00369 Blo-Chr15:5036949 0 dispersed
Blo15g00369 Blo-Chr15:5036949 Blo09g00434 Blo-Chr9:15322752 4.57E-78 dispersed
Blo15g00369 Blo-Chr15:5036949 Blo04g00277 Blo-Chr4:2106707 1.03E-73 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g349 . . . . . . . Bma12g00933 . . Cma10g00243 . Car10g00229 . . . . . . . . . . . Cla06g01479 Cam06g1633 Cec06g1696 Cco06g1690 Clacu06g1599 Cmu06g1548 Cre06g2360 . . . . . . . . . Blo15g00369 . . . . . . . . . . . . . . Cpe18g00750 . . . . . . . . . . . . . . Lsi06g01342 . Chy02g02375 Cme02g01757
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011821 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo15g00369 Blo_Chr15 FPKM 0.216939 0.0 0.316999 0.342662 1.016436 1.104986 1.224184 1.334529 1.339397 1.363242