Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00380 ATGACAGCTGAAGAGGAATATAAGGTGGTTGAGAAGAAGAACAAAGTACTGGTTGGGATTCGAATAGATAGCAATAGCAGAGACTTGCTCAACTGGGCTATTGCTAAAGTCTCTAATCCTGGAGATTGTGTTCTGGCAATTTACGTTTGTCAAAATTCTGGGCAGGCTGCAAAGGAGAAGCCACGGTTGGATAATTTTTTAGAAGATTATGAAGACATGTGTGATAACAACAAGGTTAGTCTGGTGGGTCAGATCTTCACTGGAGATTCGGCTAGAAAGGTTCTGGTAAGGGAGGCAAAGAGCCAAAGTGCTTTAGCTCTAATCGTGGGGACGAGCAAACCAAGTATTATTTGGGGTTGGTCTTCAACGACTAGATTCTGTGATAAGCAATTGCCTCTAACCACTGATGTTTTGACCCTCTACAATGGCAAAATTGTCTATGGAAGGTTCACCAAAAATCAACCACCAGGTTTGCTATCTCTATCCCATAAAGGAACATTCTCAAACCAGTCAGAATTCGGTGATTCTGAGGTGGAGACAGTAAAAACAAAGGGAGATTTGGAAGTTGAAGGGAAAGAACTTGTCTGTGAGAATAAGAATTTTCATATGAGGGTTAATTCTCTTATGCAGCTAGACTTTGGAGAGAAGAGGCTCGGTTGGCCTTTACTTCTCAGGACTGATTCAATAATTTCACAAACCCCAAATGGAGGGGATGTGTCTGTTGTCCAATGGGCATTGAGCTTGCCGAATCGGTCACCACAGCTTAGTCCACAGAACGCAACTGTAAGAGAGGAAACCATAGGCTTTCAGGATGTGAAGCCTAAGATAAGTGGTTTATCTACTTTGAGTGAGCCACCAGAAGACTTGGACTCTTTCCTGAAAACTATCTCATCTGTTTGCGCATGGTTTAGCCCGGATCTACTCAATACCTCGACATCTCAATTTGCTTCAGAAAACTTGATTGGGAAAGGTGGTTGCAACCGAGTGTACAAAGGAATTCTTCACAACGGGAAACAAGTTGCAGTAAAAGTAATGAACCCATCAAAAGAGGCATGGAAGGCATATGCTCGCGAAGTCAATATCATTTCTGCATTGGATCACAAACATGTCACACCTCTGCTGGGTGTTAGCATTGAAGACAATGCTTTGATCTCTGTATATGACTATTTTCCTAAAGGAAGCTTAGAAGAAAATCTTCATAGTAAGAACATGAAAAAATGTGCACTTTCATGGGAGGCGAGGTTCAATATAGCCATTGGAATTGCAGAAGCCTTAAACTATTTGCACAATGAATGTTCAAAGCCAGTTATTCATCGAGATGTCAAGTCTTCAAACATACTTCTCAGCAACCAATTCGAACCACAGTTATCTGATTTTGGACTTGCAATGTGGGGACCCACAACGTCCTCCTTTCAAATAGAAGACGATATCTTAGGAACATTTGGCTATCTCGCTCCTGAGTACTTCATGTATGGAAAAGTGAGTGATAAGATTGATGTCTATGCTTTTGGTGTTGTTCTACTGGAGTTATTATCAGGGAAGAAACCAATCTGCTCTGATACCCATAAAAAACAGGAGAGCCTAGTCATGTGGGCAAAACCAATAATTGAGAGTGGGGATATAATCGGCCTAGTAGATCCAAATTTGAACGGTAATTTCGATGACCCCCAACTGAAAAGAATGATTCTTGGGGCGAAACTATGCATCACGAGAGCAGCCCGTCTTCGCCCGAATATTAGTGAGATATTGAGGCTCTTGAAAGGGGAGAAAGATATTGAAAAGTGGATGATCCTCAGAGACGGATTGGAGGAGGTGGAAAACAGAGATGATGAAGTATATCCAAATTCAAGCGCAGATTTACATTTGCGTATGGCGTTGCATGGTGTTGATTATGACACTACTTCATCAGATAGCAATGAGCAGAGAACTAGCTTCTCTCTGGAAGATTACTTCAAAAAAAGATGGAGCAGATCATCGAGCTTTGATTAG 1989 41.63 MTAEEEYKVVEKKNKVLVGIRIDSNSRDLLNWAIAKVSNPGDCVLAIYVCQNSGQAAKEKPRLDNFLEDYEDMCDNNKVSLVGQIFTGDSARKVLVREAKSQSALALIVGTSKPSIIWGWSSTTRFCDKQLPLTTDVLTLYNGKIVYGRFTKNQPPGLLSLSHKGTFSNQSEFGDSEVETVKTKGDLEVEGKELVCENKNFHMRVNSLMQLDFGEKRLGWPLLLRTDSIISQTPNGGDVSVVQWALSLPNRSPQLSPQNATVREETIGFQDVKPKISGLSTLSEPPEDLDSFLKTISSVCAWFSPDLLNTSTSQFASENLIGKGGCNRVYKGILHNGKQVAVKVMNPSKEAWKAYAREVNIISALDHKHVTPLLGVSIEDNALISVYDYFPKGSLEENLHSKNMKKCALSWEARFNIAIGIAEALNYLHNECSKPVIHRDVKSSNILLSNQFEPQLSDFGLAMWGPTTSSFQIEDDILGTFGYLAPEYFMYGKVSDKIDVYAFGVVLLELLSGKKPICSDTHKKQESLVMWAKPIIESGDIIGLVDPNLNGNFDDPQLKRMILGAKLCITRAARLRPNISEILRLLKGEKDIEKWMILRDGLEEVENRDDEVYPNSSADLHLRMALHGVDYDTTSSDSNEQRTSFSLEDYFKKRWSRSSSFD 662
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 5291273 5294045 + BLOR06774 Blo15g00380 70780

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00380 662 SUPERFAMILY Protein kinase-like (PK-like) 296 586 IPR011009 -
Blo15g00380 662 ProSiteProfiles Protein kinase domain profile. 315 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo15g00380 662 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 14 127 - -
Blo15g00380 662 SMART serkin_6 315 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo15g00380 662 CDD USP_Like 15 127 - -
Blo15g00380 662 Gene3D Transferase(Phosphotransferase) domain 1 390 601 - -
Blo15g00380 662 Gene3D Phosphorylase Kinase; domain 1 288 389 - -
Blo15g00380 662 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 13 656 - -
Blo15g00380 662 Pfam Protein kinase domain 317 529 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo15g00380 662 PANTHER OS01G0253100 PROTEIN 13 656 IPR045271 GO:0004714|GO:0006468
Blo15g00380 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 436 448 IPR008271 GO:0004672|GO:0006468
Blo15g00380 662 Gene3D HUPs 1 132 IPR014729 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00380 - - - jre:108993318 767.689
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00448 Blo-Chr6:25501975 Blo15g00380 Blo-Chr15:5291273 0 dispersed
Blo15g00380 Blo-Chr15:5291273 Blo18g00172 Blo-Chr18:1660993 1.96E-18 dispersed
Blo15g00380 Blo-Chr15:5291273 Blo17g00166 Blo-Chr17:1676419 5.04E-164 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g160 . Blo15g00380 Bda06g00477 Bda08g00992 Bpe07g00715 . Bma05g00367 Bma12g00919 . . Cma02g00258 Cma20g00752 . Car20g00653 . . . . . . . . . . . . . . . . . . . . . Lsi10g00758 . Chy11g00254 . . . . . . Bpe05g00289 . . . Cmo02g00255 Cmo20g00747 . . . . Cpe16g00317 Cpe05g01372 Bhi10g01849 . . . . . . Cla02g01167 . . . . . . . Csa02g01393 . Cme11g00380
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005074 2 4 2 2 2 1 2 1 1 1 1 1 2 1 0 2 1 0 2 1 1 1 1 1 1 1 1 0 1 2 39
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84710 PF00069 Pkinase 6.80E-42 CL0016 Blo PK
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo15g00380 Blo_Chr15 FPKM 3.834478 4.455192 0.256295 0.180625 14.401268 15.629675 15.867588 0.093056 0.0 0.0