Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00384 ATGAACTTTCTGGGGGCCTGCTTTTTTCCGGCATCGGAACGGGGATCGGATTCCAGGGCCCGGCGAGATGGCCTCCTCTGGTACAAAGATAGTGGGCAACACTTGAACGGACAATTTTCCATGGCTGTTGTTCAGGCCAATAATTTACTTGAGGATCAGAGTCAGATTGAATCTGGTTGTTTGAGTTCCAACGAATTTGGCCCGTTTGGTACGTTCGTCGGAATTTATGATGGCCATGGCGGGCCCGAGACTTCCCGATATATCAACGACCAACTCTTTAAACACCTCAAGAGATTCACTTCGGAGCAGAAATCAATGTCGGTGGATGTAATCAGGAGGGCGTTTCAAGCTACCGAAGATGGGTTCATGTCGTTAGTTTCCAAAAAATGGCAGATGAATCCGCAATTTGCAGCTGTTGGATCGTGTTGCCTAGTCGGTATCGTGTGTAGCGGGACCCTTTACATTGCCAACCTCGGCGATTCTCGAGCTGTCCTCGGAAGAGCAGTGAAAGCCACAGGAGAAATTCTTTCGATTCAATTATCGGCAGAGCATAATGCCGCTATCGAGTCTGTAAGACGAGAGCTTCGAGCTTCCCATCCCTATGACCCTCACATTGTTCTTCTTAAGCATAATGTATGGCGAGTTAAGGGTCTTATACAGATCTCTCGATCTATCGGCGATGCATATCTAAAGAAAGCCGAGTTCAACAAGGAGCCCCTTTATGCAAAGTTTCGCCTCCGCGAGCCTTTCAAGAATCCGATTTTGAGTGCGGAACCGTCAATTTTGGTGCACCAATTGCAACCGAATGATCAATTTATCATATTTGCATCAGACGGTCTCTGGGAACACCTCAGCAATCAGGAGGCTGTCAACATCGTTCAAAATCATTCCCGTAGCGGAATTGCGAGGTGTCTAGTGAAAGCTGCATTACAAGAAGCAGCAAAGAAGAGAGAAATGAGATATTCGGACTTGAAGAAGATCGACAGAGGTGTAAGGCGACATTTCCACGACGACATATCAGTGATCGTCTTGTTCCTGGACTCGAACCTAGTGAGTAGGGCTAGCTCGGTGAAGTCTCCTACAATATCGATTAGAGGGGGTGGAATCAACCTACCTTCTAAATCATTGGCTCATTGCACTACACGCCTCTAG 1152 47.31 MNFLGACFFPASERGSDSRARRDGLLWYKDSGQHLNGQFSMAVVQANNLLEDQSQIESGCLSSNEFGPFGTFVGIYDGHGGPETSRYINDQLFKHLKRFTSEQKSMSVDVIRRAFQATEDGFMSLVSKKWQMNPQFAAVGSCCLVGIVCSGTLYIANLGDSRAVLGRAVKATGEILSIQLSAEHNAAIESVRRELRASHPYDPHIVLLKHNVWRVKGLIQISRSIGDAYLKKAEFNKEPLYAKFRLREPFKNPILSAEPSILVHQLQPNDQFIIFASDGLWEHLSNQEAVNIVQNHSRSGIARCLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDISVIVLFLDSNLVSRASSVKSPTISIRGGGINLPSKSLAHCTTRL 383
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 5408640 5410421 + BLOR06778 Blo15g00384 70784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00384 383 PANTHER ALPHABET, ISOFORM E-RELATED 2 376 - -
Blo15g00384 383 ProSiteProfiles PPM-type phosphatase domain profile. 38 346 IPR001932 -
Blo15g00384 383 Gene3D - 26 357 IPR036457 -
Blo15g00384 383 CDD PP2Cc 39 346 IPR001932 -
Blo15g00384 383 SMART PP2C_4 30 344 IPR001932 -
Blo15g00384 383 SUPERFAMILY PP2C-like 47 347 IPR036457 -
Blo15g00384 383 ProSitePatterns PPM-type phosphatase domain signature. 72 80 IPR000222 GO:0043169
Blo15g00384 383 Pfam Protein phosphatase 2C 71 315 IPR001932 -
Blo15g00384 383 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 2 376 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00034 Blo-Chr1:437461 Blo15g00384 Blo-Chr15:5408640 4.61E-133 dispersed
Blo04g00873 Blo-Chr4:9692817 Blo15g00384 Blo-Chr15:5408640 4.05E-147 dispersed
Blo13g00743 Blo-Chr13:30209293 Blo15g00384 Blo-Chr15:5408640 3.43E-68 dispersed
Blo07g01413 Blo-Chr7:34152304 Blo15g00384 Blo-Chr15:5408640 4.12E-147 transposed
Blo18g00725 Blo-Chr18:18643623 Blo15g00384 Blo-Chr15:5408640 0 transposed
Blo13g00497 Blo-Chr13:26208463 Blo15g00384 Blo-Chr15:5408640 0 wgd
Blo15g00384 Blo-Chr15:5408640 Blo04g00583 Blo-Chr4:5022477 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00384 - K01102 tcc:18607514 638.262