Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00400 ATGGGTTGTTCCAACTCTAAGCTTAATGATCTTCCCGCCGTCGCGCTTTGCCGTGCGCGGTGTACTTTTCTTGGCGAAGCGATTCAGTTCCGCTACGCGTTAGCTGAGGCTCATGTAGCTTATATTCATTCTCTTGAAAGTGTTGGCCTCTCTCTGCACAATTTTATCGAACAGGGGGTTGTTGTTTCTTCTGGGTCTCCTCCTCATAAAAAGGATGACCCTGTTGGAACTACAAAATCTTTGAACTCTCCTCATCTCCTATCTCGCTCCGATTCAGGCTCCCATTTGCATTTCCACTCCGATTCCGACGATGAATTGGATTTATTTCATCATCCCGAGCGCGATACAGATGGGTTTCCTTCATTCTTTGGCGGGAATGGAGGTTTGATGCATATGAATTATATGAAGAACAAAGCGACGCCGTCTGTGGTGTACGAGCAGAGGGCTATTCCCTCAGAGAAGGTTTATCATATGGGTGAATCTTCTTCTTCTACTTCTTTTACCCATCATCCACATTCTTATTCTAACTTAAATTCAAACCCTTATCCCTATGATGGGTATTCCAATTATGGTGGTGGAATTGGTGGCTATTACAGTTCTTTACCACCTCCTTCTTCGTATGAGTCTCTGTCAAATGAGCAAAGGTCGGCGAAGCCGCCACCACCTCCTCCTTCTCCACCTCGAACGTCTGCTTGGGATTACTTAAATCTATTTGAAACATTTAACTTTTATGGTGCTTACACTCCGAACAGAGACTGGAAGGAGGTGAGGATGGAAGAGGGGATACCCGATTTAGAAGAGGATGATTTCCAGAAAGAGGTGGTGAAGGAAGTTCAAGGAAATCAGAAATTTGTCCATGGAGGTGGAAACAAAACAAAACCAGTTGCTAATGACGAAGTTAGGGTTGATGATAAGGTAAATGCTGCTCTTTACAATGCGAGGCCTAGTGCTTCAGCTGAGAATCATGATATAGAGTACGAGGTACATTTCGTGGATAAAAAAGTTGTTGATGATAAGGAGAGGTCGGAGGATCATGTTAATGGCGCTGGAGGTGGCTCCATGGATGTTTACGATGTAGCCAGGGAAATCAAAGTTCAGTTTGAGAAAGCCTCAGAGGCTGGGATTGAACTTAGCAAGCTGTTGGAGGTGGGAAAACTTCCTTATCAGCAGCATAAACATGTTTCTTCAAAGATGTTACACGCAATTTCTCCTTCAATGTTGGTCGAATCAACTGTTAAGTCCTCATCCTCCATTGCCAGACCTGGTTCTGCTGACGTTAAATTGGCTGAAGATATGGGGATAAAATTTGGTAGTCTTTCTTCCATCTTACATAAGTTGCATCTATGGGAGACGAAACTTTACGATGAAGTTAAGGTGCGTTATCTGCCACTTTACCGCGTCATTGTCGCTCGTCTTTTGCAGGCAGAGGAGAAGATGCGTGTGCTTCATGATAAAAAAAAGGAGAAGCTGAAGCGTCTACTCGAGAGAGGGGCTGAAACTCAGAAAGTCGAATCAACTCAAAGTTTAATCAGGAGTTTATCCACCAAAATAGGAATCGCAATTCAGGTTGTTGACAAGATGTCTGTGGCAATAAACAAAACTCGGGATGACGAACTATGGCCGCTTCTTCACGAGTTAATTCAAGGGTTAACTGGGATGTGGAGATCAATGCTTGAGTGCCATCGGACTCAATTACGAGCAATAAGAAAAGCCAGAATCTTGGGCTCCAATGGATCAGGAAGAAAGCTCGGAGACACCCTCTTTGGAGTGACTTTAGAGCTCGGGTACGAGCTTGTTAACTGGACTTCTAGATTTTCTAGTTGGGTAAGTGCGCAGATGGGTTATGTAAGAAACTTGAATAATTGGCTTTTGAAATGTCTGCCATACGAACCCGAAGAAACAGATGATGGAATTGCTCCGTTTTCGCCGAGCAGGATTGGTGCACCTCCCATCTTCGTAATATGCAATCAATGGTTGCAGGCTATGGAGAGAATATCGGAAAAGGAAGTGATTGATTCGATGCATGTTTTTACTGCGGAGGTGCTTCGAATATGGAGGCGGGAGAAGATGGAAATGCGAGAGGGGATGGTTGGGAGAAGGGATATGGAAGGGAGAGTAAGAAACTTAGACAGAGAAGACCAGAAGGTCCAGAAAGAAATCCAAGCTTTAGAAAAGAGTCTAGCTCTGGTTTCTATCGATGGTAATGGCGTAAATCAGAGCAATACGAGTGATGGTAGTTTACACAAAAGCATGGAACGCGTTTTTGAGACGATGGAGAGATTCACAGAAGAATCCATGGAAGTCTATGAAGAGCTCTTGAAACGCTGCGAAGAACAAAGGCTCAAACGAGAGGCAAACCCAGAGAAGTTCCTGAGCCAACAATCTGACTTGCAGCCTCAGGTTCAGCCACCGACGTATATCGATAACAGCCCGGATCCTATCGATGTTCCGTCTTTCTCTGAATTCTCCTTCCCCGACCTCAAGGAGGCTACCAATAACTTCAGTTCCGACTTCATCGTCTCTGAGAACGGCGTGAAGGCTCCGAACATTGTCTACAAGGGCCACCTCCAAAACAAAACGTGGATCGCAGTGAAGAAGTTCTCAACAATAGAGTGGCCCGACCCTGAGCAGTTTAAGGAAGAGGCTATGCGTGTGGGGAGGTTAAGACATGGGAGGTTAGCCAATTTGATTGGGTATTGCTGTGATGGTGATGAGAGACTACTCGTGGCGGAATACATTCCCAACGATACTCTTGCCAAGCATTTATTCCTTTGGGAGAATCAAGCTATTGAGTGGGCCATGCGTTTGAGAGTGGCTCTTTATGTTGCAGAAGCTTTACGCTACTGCAATTTTGAGGGCCTTCCAGTATACCATGGCTTAAATGCTTACAGGGTTCTATTTGATGAGGATGGCGATCCACGACTTTCGTGTTTCGGATTGATGAAATACATTAAGGATGGGGAAAGTGAGGATGAAGAAATTTTTAGGAAAAGGTTTGGCGTAGTTCCTACATACCCACCACTACCTTTCCATTTGAAAAAGGAGAGAGTGAGACCAGAAAGCGTAATTTATGATTTTGGAGCCCTTCTTCTAGAACTGCTAAGTGGCAAGCACATCCCACCGAACCATGGTCTTGATATGATTCAAGGAAAAAATATAGCTCAAATAATGGACCCGTATTTGGAGGGACAATATTCTCCAGAGGAAGCAACAGTAGTTGTTAATCTTGCTTCTCAATGTTTGCAAGATAAACCTACGAATCGGCCTAAAATTAAAGTTCTCGTCGAAAAACTTTTTCCCTTGCAGAAAAAAAAGGATGTTCCATCTTCTGTCATGCTTGGAATGAAGAATCAGCATGATGCCCCATTGCCTCTGCAACGTCCTCTATCATCAATGGGCGACGCCTGTTCAAGAAAGGACCTAACAGCAATCCATCAGATTTTGGTTGCGGCGCACTACAGAGACGATGAGCGTTCCAATGAGTTATCTTTCCAAGAGTGGACGGAACAGATGAGAGATATGCTCGAAGCGAGAAGGCGCGGGGATTATGCATTCCGTGACAAAAATTTCCAAACTGCTATAGAATGTTATTCCATGTTTATAAATGCAGGCACTATGGCTTCCCCTACAGTATTGGCACGTAGAAGCCTATGCTTCTTGTTATGTGATCAGCCTGATCCTGCTCTGCGGGATGGCATGCAGGCGCAAGTAGTCTCCCCTGATTGGCCTACTGCCTTCTACATGCAGTCAGTGGCTCTTGCAAAGCTGAACATGCACAAAGATGCGGTCGACATGCTGAACGAAGCAGCTGATCTGGAAGAGAAGGGACAGCAAGCTAGCTCTTCCTTGTCTTCTTCCATATCTGGACAATTAAGTGAGTTACAGCATCTGCAAGACTCCATTGACGAGATGCTCGAGTTGAATTTGACTAAACAAGCTATTTTCGGACAAAGGAACGAGACCTGGGTTGCAGGGCTTCTAGAAGGATCTGTGAGAATCTTGGATTTGTGTGGCACGGCTAGAGACTCCTTGCGTGAAACGAAGGAATATGTACAAGGATTACAGTCAATTTTGAGAAGGAGAAGAGGAGGTGAAGTGGGTATTTCAAATGAACTCAGGAAAAGCTTACAATCAAGGAAGATGATCCAAAGAACAGTTCGAATGGTGTTGAAAGGGATGGAGAGGAAGCAAACTCAATTTAAAACCAATGAAATTATGTTTGTCATGAGCATATTAGGAGAGTTTGAATCACTGTCTTTGAACACCATTGAAACCTTGTTGTTGTATGTACAAGGTTCGAAGCCATCTTCAAAGATGAACAGAGGGTGGTCTCTAGTTTCAAAGCTGGTGAAGTCTAAAAGATTGGCCAAAGGCGATGGAGAAGGAGAGGAAAAGGAAGAAGATAGAAATGAGTTTTCAATGGTGGATTCAGCAATGAGCACAGTCATTAGCCAGAAGATGAGAAAATCAGATTACATTTCCCAGGTTGAGAATCTGAAGAATTGGCTGTGGAAACTAGAGTCAGCCATTGATGACATTGAACAGCAGGTTGAGAATCTTTACAGGAACCTAGTTAGAACTAGGGTTTCATTGCTCAACATCCTCAACCATTAG 4614 44.17 MGCSNSKLNDLPAVALCRARCTFLGEAIQFRYALAEAHVAYIHSLESVGLSLHNFIEQGVVVSSGSPPHKKDDPVGTTKSLNSPHLLSRSDSGSHLHFHSDSDDELDLFHHPERDTDGFPSFFGGNGGLMHMNYMKNKATPSVVYEQRAIPSEKVYHMGESSSSTSFTHHPHSYSNLNSNPYPYDGYSNYGGGIGGYYSSLPPPSSYESLSNEQRSAKPPPPPPSPPRTSAWDYLNLFETFNFYGAYTPNRDWKEVRMEEGIPDLEEDDFQKEVVKEVQGNQKFVHGGGNKTKPVANDEVRVDDKVNAALYNARPSASAENHDIEYEVHFVDKKVVDDKERSEDHVNGAGGGSMDVYDVAREIKVQFEKASEAGIELSKLLEVGKLPYQQHKHVSSKMLHAISPSMLVESTVKSSSSIARPGSADVKLAEDMGIKFGSLSSILHKLHLWETKLYDEVKVRYLPLYRVIVARLLQAEEKMRVLHDKKKEKLKRLLERGAETQKVESTQSLIRSLSTKIGIAIQVVDKMSVAINKTRDDELWPLLHELIQGLTGMWRSMLECHRTQLRAIRKARILGSNGSGRKLGDTLFGVTLELGYELVNWTSRFSSWVSAQMGYVRNLNNWLLKCLPYEPEETDDGIAPFSPSRIGAPPIFVICNQWLQAMERISEKEVIDSMHVFTAEVLRIWRREKMEMREGMVGRRDMEGRVRNLDREDQKVQKEIQALEKSLALVSIDGNGVNQSNTSDGSLHKSMERVFETMERFTEESMEVYEELLKRCEEQRLKREANPEKFLSQQSDLQPQVQPPTYIDNSPDPIDVPSFSEFSFPDLKEATNNFSSDFIVSENGVKAPNIVYKGHLQNKTWIAVKKFSTIEWPDPEQFKEEAMRVGRLRHGRLANLIGYCCDGDERLLVAEYIPNDTLAKHLFLWENQAIEWAMRLRVALYVAEALRYCNFEGLPVYHGLNAYRVLFDEDGDPRLSCFGLMKYIKDGESEDEEIFRKRFGVVPTYPPLPFHLKKERVRPESVIYDFGALLLELLSGKHIPPNHGLDMIQGKNIAQIMDPYLEGQYSPEEATVVVNLASQCLQDKPTNRPKIKVLVEKLFPLQKKKDVPSSVMLGMKNQHDAPLPLQRPLSSMGDACSRKDLTAIHQILVAAHYRDDERSNELSFQEWTEQMRDMLEARRRGDYAFRDKNFQTAIECYSMFINAGTMASPTVLARRSLCFLLCDQPDPALRDGMQAQVVSPDWPTAFYMQSVALAKLNMHKDAVDMLNEAADLEEKGQQASSSLSSSISGQLSELQHLQDSIDEMLELNLTKQAIFGQRNETWVAGLLEGSVRILDLCGTARDSLRETKEYVQGLQSILRRRRGGEVGISNELRKSLQSRKMIQRTVRMVLKGMERKQTQFKTNEIMFVMSILGEFESLSLNTIETLLLYVQGSKPSSKMNRGWSLVSKLVKSKRLAKGDGEGEEKEEDRNEFSMVDSAMSTVISQKMRKSDYISQVENLKNWLWKLESAIDDIEQQVENLYRNLVRTRVSLLNILNH 1537
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 5698955 5707968 - BLOR06794 Blo15g00400 70800

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00400 1537 Pfam Protein of unknown function (DUF630) 1 58 IPR006868 -
Blo15g00400 1537 ProSiteProfiles Protein kinase domain profile. 837 1100 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo15g00400 1537 Coils Coil 472 492 - -
Blo15g00400 1537 MobiDBLite consensus disorder prediction 63 98 - -
Blo15g00400 1537 SUPERFAMILY Protein kinase-like (PK-like) 813 1106 IPR011009 -
Blo15g00400 1537 Coils Coil 699 726 - -
Blo15g00400 1537 PANTHER RNA POLYMERASE SUBUNIT BETA, PUTATIVE (DUF630 AND DUF632)-RELATED 1 784 - -
Blo15g00400 1537 SUPERFAMILY TPR-like 1175 1283 IPR011990 GO:0005515
Blo15g00400 1537 MobiDBLite consensus disorder prediction 204 231 - -
Blo15g00400 1537 PANTHER UNCHARACTERIZED 1 784 - -
Blo15g00400 1537 Coils Coil 759 786 - -
Blo15g00400 1537 Gene3D Phosphorylase Kinase; domain 1 812 912 - -
Blo15g00400 1537 Gene3D Transferase(Phosphotransferase) domain 1 914 1115 - -
Blo15g00400 1537 Pfam Protein BPS1 1291 1534 IPR004320 GO:0048364|GO:0048367
Blo15g00400 1537 Pfam Protein tyrosine and serine/threonine kinase 851 1098 IPR001245 GO:0004672|GO:0006468
Blo15g00400 1537 Gene3D Tetratricopeptide repeat domain 1172 1286 IPR011990 GO:0005515
Blo15g00400 1537 Coils Coil 1496 1530 - -
Blo15g00400 1537 Pfam Protein of unknown function (DUF632) 357 681 IPR006867 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00400 - - - aprc:113847989 1333.55
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00933 Blo-Chr3:35321568 Blo15g00400 Blo-Chr15:5698955 1.23E-50 dispersed
Blo12g01126 Blo-Chr12:28887078 Blo15g00400 Blo-Chr15:5698955 7.97E-102 dispersed
Blo14g00102 Blo-Chr14:713050 Blo15g00400 Blo-Chr15:5698955 1.01E-132 dispersed
Blo15g00400 Blo-Chr15:5698955 Blo01g01619 Blo-Chr1:56096377 1.52E-126 dispersed
Blo16g00845 Blo-Chr16:35754989 Blo15g00400 Blo-Chr15:5698955 8.15E-09 dispersed
Blo15g00399 Blo-Chr15:5649152 Blo15g00400 Blo-Chr15:5698955 2.71E-47 tandem
Blo02g00704 Blo-Chr2:21737884 Blo15g00400 Blo-Chr15:5698955 0 transposed
Blo12g00863 Blo-Chr12:26862607 Blo15g00400 Blo-Chr15:5698955 0 transposed
Blo13g00483 Blo-Chr13:25788560 Blo15g00400 Blo-Chr15:5698955 0 wgd
Blo15g00400 Blo-Chr15:5698955 Blo04g00600 Blo-Chr4:5164305 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g245 . Blo15g00400 . . . . . Bma12g00902 Cmo19g00800 . . . . . . . . Bhi05g01616 . . . . . . Cla02g00371 . . . Clacu02g0370 Cmu02g0367 Cre02g0700 . . . . Lsi10g00825 Csa07g00161 . Cme01g01175 . . . . . . . . . . . Cma11g01347 Cma19g00784 . . . . . . . . . . . . . . . . . . Lsi11g01264 . Chy01g00628 Cme11g01223
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004039 1 1 3 3 2 1 2 1 1 1 1 1 2 1 0 2 1 3 2 1 1 1 1 1 1 1 1 3 1 2 43
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84713 PF04782 DUF632 5.80E-97 No_clan Blo PK
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo15g00400 Blo_Chr15 FPKM 1.094092 1.237169 0.158112 0.267256 0.549948 0.594101 0.63453 1.964081 2.512307 1.726433