Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00403 ATGGAATCACTAGACGCAAGGTCCAAACTTGACTTTGAAGACCAGATCCTTGGTAGTCCTGCATCCATAGCTGCAAAGAAACATTCCTTTCAGGAGTCTTTACACATATCCTCATCTACTAGTAGTCCGCAGACTTTTTTCTCTCAAGACATGAGGAAAAGGGTAACTGACAGTATCAAAATCGTCGTCTTTTCTGCAAAAATCAACATTCTCATGCCTTTTGGGCCCCTGGCGATCTTGGTTTATAACTTATCTGGCCATCATGGATGGGTTTTCTTTTTAAGCTTATTAGGGATCATACCTCTGGCCGAGCGATTGGGTTATGCAACTGAGCAGCTGGCCTGCTATACTGGAGCCACAGTTGGAGGTCTTCTTAATGCTACTTTTGGAAATGCAACGGAATTGATAATATCTATTTATGCATTGAGGAGGGGAATGATCCGTGTTGTTCAACAGTCATTACTTGGCTCTATTTTGTCAAACATGTTACTAGTGCTTGGATGTGCATTCTTTGCTGGTGGACTCGTGTTTTCAAAACAAGAACAAGCGTTCACTAAGTCATCTGCTACGGTGAACTCTGGATTGCTGCTAATGGCAGTCATGGGTCTTTTATTTCCGGCAGTTCTTCATTCCACACATACTGAACTCCATTTTGGAAAGTCGGAGTTGGCTCTTTCGAGGTTTAGCAGCTGCATCATGCTGGTGGCGTACGCTGCCTATCTTTTTTTCCAGTTGAGAAATGATAAAAATCCCTATGTCCCAGTTGATGAGGTTGAGGTGCAGGCTAAAGAGAATTCTGACTATGAAGATGCACCTGAGATCTCTAAATGGGAATCGATAATTTGGTTGACTATTTTGACAGCATGGATTTCAGTCCTCTCTGAATATTTAGTAAATGCCATTGAGGGAGCATCAGTGGCAATGAAAATACCAGTAGCATTCATTAGTGTTATCCTGCTCCCAATTGTCGGGAATGCTGCCGAGCATGCAGGTGCTGTAATGTTCGCCATGAAAGACAAGCTTGACATTTCTTTGGGAGTTGCCATTGGATCGTCAACCCAGATATCTATGTTCGGGATTCCCTTTTGTGTCGTCATCGGTTGGGTCATGGGTCGTCCAATGGACTTAAATTTTCAACTTTTCGAGACAGCCACCCTTCTCATGACTGTCATAGTTGTAGCATTCATGCTTCAGGACGGTACCTCGAATTACTTCAAAGGACTAATGCTTATTCTTTGCTACCTGATAGTAGCAGCAAGCTTTTTTGTACATATAGATCCATCTTCAGTAGGGCTCCGACCATTTCACCAAAAAACAAACAATGAAAACTTCATCTCGGCGAACAACAAGCTCAGACCTTCGATACCAATGTATGCCCGAGTAAAGAAAATGATGCTCAAGAGAAAGAGTGGTCTGTCGCAATCAATACCAGAGACAGAAACGACGGAGTCTGCCGGTCCAGCAACGGTGCAAAGAGCACCCGCTGCGGTCCTTTCTGTCCAAACTGCGGCAGTGCAAGCTATCCAAACTGCGCCGATGCAAGCTGTCCAAACCCCGGAGGCTGGAGAAACCGTGGAAGAATCTCAATCTCAACCTCAACCCGAGCCTGAACAATGA 1617 44.34 MESLDARSKLDFEDQILGSPASIAAKKHSFQESLHISSSTSSPQTFFSQDMRKRVTDSIKIVVFSAKINILMPFGPLAILVYNLSGHHGWVFFLSLLGIIPLAERLGYATEQLACYTGATVGGLLNATFGNATELIISIYALRRGMIRVVQQSLLGSILSNMLLVLGCAFFAGGLVFSKQEQAFTKSSATVNSGLLLMAVMGLLFPAVLHSTHTELHFGKSELALSRFSSCIMLVAYAAYLFFQLRNDKNPYVPVDEVEVQAKENSDYEDAPEISKWESIIWLTILTAWISVLSEYLVNAIEGASVAMKIPVAFISVILLPIVGNAAEHAGAVMFAMKDKLDISLGVAIGSSTQISMFGIPFCVVIGWVMGRPMDLNFQLFETATLLMTVIVVAFMLQDGTSNYFKGLMLILCYLIVAASFFVHIDPSSVGLRPFHQKTNNENFISANNKLRPSIPMYARVKKMMLKRKSGLSQSIPETETTESAGPATVQRAPAAVLSVQTAAVQAIQTAPMQAVQTPEAGETVEESQSQPQPEPEQ 538
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 5754119 5758778 + BLOR06797 Blo15g00403 70803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00403 538 PANTHER VACUOLAR CATION/PROTON EXCHANGER 1 434 - -
Blo15g00403 538 TIGRFAM cax: calcium/proton exchanger 72 422 IPR004798 GO:0006816|GO:0015369
Blo15g00403 538 MobiDBLite consensus disorder prediction 472 488 - -
Blo15g00403 538 MobiDBLite consensus disorder prediction 470 489 - -
Blo15g00403 538 TIGRFAM caca2: calcium/proton exchanger 56 422 - -
Blo15g00403 538 MobiDBLite consensus disorder prediction 511 538 - -
Blo15g00403 538 Gene3D - 118 257 IPR044880 -
Blo15g00403 538 Gene3D - 267 423 IPR044880 -
Blo15g00403 538 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 1 434 IPR004713 GO:0006812|GO:0008324|GO:0016021
Blo15g00403 538 Pfam Sodium/calcium exchanger protein 280 419 IPR004837 GO:0016021|GO:0055085
Blo15g00403 538 Pfam Sodium/calcium exchanger protein 90 245 IPR004837 GO:0016021|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo15g00403 Blo-Chr15:5754119 Blo18g00366 Blo-Chr18:3851955 3.73E-19 dispersed
Blo01g01049 Blo-Chr1:34017284 Blo15g00403 Blo-Chr15:5754119 6.38E-116 transposed
Blo03g00483 Blo-Chr3:16996489 Blo15g00403 Blo-Chr15:5754119 0 transposed
Blo05g00015 Blo-Chr5:147481 Blo15g00403 Blo-Chr15:5754119 0 transposed
Blo06g01028 Blo-Chr6:33607974 Blo15g00403 Blo-Chr15:5754119 7.06E-14 transposed
Blo15g00403 Blo-Chr15:5754119 Blo02g00170 Blo-Chr2:1478787 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00403 K07300 - csv:101215915 674.47