Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00406 ATGGGTATGCAAGACCACAAAGCAGCCAACACCTCCAGGGAACAGCCTCTAGCATCACCTCTGCAGTCGATGCGATCGCCCCCTCCTCAGACATCTCATTTTACTTCGATGCCCAAGGAGACGTCCAGCTGGATGAGCAGGATGGAGGAGCTCCATCATATGCTGCTTACCATAATACAAATGATGGAGGAGCACCTTCAAATGGCGCAGGTCCAAATACAAAAAGGGGAGGAGCGAGCAGAAGAGAGGCATCTGCGATCTGTTTTTAGCACTTCAGAGAATGGAGCAGCGAGCAGCCCATATAGAAGCCTCTCCATCACTGATATCATCTTTCCAGAGAAATTCGGGATGCCAAACATGTGCTATGCGGTGAATGACGAAGCTGCCTTTGCGTTTCAACAGCAACAATCACTAATCACCTTATGGTGGATTAACGCCCCATTGACAAAGAGCAGTATGTATTTACCCTTGTGTACATTCATATTGCTTTTCGCTTGTTTACCGATTGTTCCCTTTGCATTGCAAGCCGTACGACATCTTTTAGTGCTCACCTATGTCTCAAGAACTATGTCTGGAACTGTCTCAGCAACTCTCTCGGGGACTGTCTCGGGGACTACGCAAGGAATTGTCTCGGGGACTGTCTCGAGGACTCTGAAACCCATAAATGTGCCCTTCAACCTTCCTCTGCCTCCTCTGGCTCTGCCTCTGTCGGCCCATGCACTGGACTTGCTTCCACCTTCGCATGTCAAGAAATTGTGCCCCACACTAGCCACAGGAGTGATCGGCGATGGATTGGTGGAAGCAGGGGAGCCTCGGTTTGTGATGGACATCTACGGGTTTGGTTTGCTCGTGATTAGACCGAGCCGGTTAGTGGTTCTTGCTTTGGTGAATACGACAAAGCGCGGCTCAAGGATGATGATGGTGGGTTGCGAATGTGTCGCCTTGACGACCTTCTCCCTTCAATGCTCTCATCTCTCTCCTCCCATCTCTGCTTTCTCCAACAGAATTTCTGCACTCTCAGCTGCTTCAGTCTCTCCTTTCTTCTACACAAATAGTCGTATCACCCATCGATTGGAACTGTGTGTGTACAAGTCTCTTTCTTCCCTGTGCTGCTTGAAGACGAGGAGGGGTTTGGGGCCTCTTTCTGCTCTTCCGCAAAGTGGTTCTTCTGAGTTCACCGTTTGTGATACTGATAATGATCGGCCACCATCGCTGCGGATTTCACCCAATTCAGTTTCACGACTAGACTACCAAGAGGACGAGGGCCAAAAAGGAGAAGGAGGAACTCCTTTTGGCGGCGGTAATTCCGCGATACTCTCTTCGTGTTTAGTCGGTATTCTTACCGGCATTGGTGTAGTGCTCTTCAATAACGCAGTCCATGGGATTCGTGATTTTTTCTGGGATGGGATCCCCTACAGAGGGGCATCTTGGCTCAGAGAAGAGCCCGTTCAAGACATTTGGAAACGAGTCATCTTGGTTCCTGCTTGTGGTGGCTGTCTTGTTAGCATTTTAAATCTGCTCAGAGGTTCTACTGCCTTGCGATTAGACAACCAATATGATTCTCCTCCTCTTACTAAAGTGGGTTCACCTGCACAAATTGGAATCCGAAATTCCATTTCTAATCAAGTCAAGGCAGCCATAAAGCCATTTCTGAAAGCGGTTGCCGCCTGTGTAACGCTTGGTACGGGAAATTCCTTGGGTCCAGAAGGTCCGAGTGTAGAGATAGGCGCTTCCATAGCAAAAGGGGTTTCTAGTTTGACCGAGAGAAATGCTCAAGGGAAGCTCTCTTTGCTAGCTGCAGGATCAGCAGCTGGAATAGCTTCTGGGTTCAATGCTGCAGTTGCTGGTTGTTTTTTTGCTGTAGAGTCAGTTTTGTGGCCATCACCGGCAGATTCATCGTTATCTCTTACAAACACCACTTCAATGGTTATATTAAGTGCTGTCATAGCTTCTGTAGTTTCGGAAATCGGCCTTGGTTCTGAGCCGGCATTTAAGGTTCCTGAATATGACTTCCGCTCTCCAAGTGAGCTTCCTCTGTATCTGTTGCTGGGTGTTCTGTGTGGCTTGGTTTCATTGGCCTTTTCTCGGTTTACATCGTACATGTTGGCATATTTTGACAATCTTCATATGAAGCATGGCATTCCAAAGGCTGTATTTCCTGTAATTGGTGGAGTCACTATTGGACTAATAGCTCTGGAATATCCTGAAATCCTGTACTGGGGTTTTCAAAATGTTGATATTTTGTTGGAATCTCGCCCATTTGTGAAAGGACTTTCAGCTATCTTATTAGTTCAGCTCGTAGCTGTGAAGATCCTGGCCACCTCTTTGTGCAGAGCCTCCGGACTGGTTGGAGGCTACTATGCACCATCCCTCTTTATCGGGGCAGCAACGGGAATGGCATATGGGAAATTTGTTGGTCTTGCAGTTGCTGGGTCTAATCCTGTTTTTCAACTCTCCATCTTGGAAGTGGCATCACCTCAAGCATATGGCCTGGTTGGCATGGCAGCTACACTGGCAGGGGTTTGCCAGGTGCCTCTTACTTCAGTCTTGCTGCTCTTTGAATTGACTCAAGATTACCGAATAGTGCTTCCGCTTCTTGGAGCTGTAGGGGTCTCATCATGGATTACATCTGGACAGACAAAGAGAGGAGATGTGAAGGAGATTAAGAGACAAAAACAGAAAAATATTTTTATTAATCAACAATCTGAACGTCCTACTGAGATTTCTACCAGTTATGCAACTTCTGAAGAGGCAACTTACGCAAGTGATCTATGTGAAGTTGAAAGTTCACTATGTGCAGATGATTCAAATAATGAAATTGTAGATTTAGAAAAGAGAATTAGTGTTTCAGAAGCCATGAAAACTAGATATGTGACTGTCTTGTTGAGCACTTTGGTTATAGATGCCTTGAGTCTCATGCTATCAACAAAGGAGTCTTGTGCCGTTGTTGTAGATGAAAATAATAATTTGATTGGCTTCCTTACACTTGAAGGCATTCAAGAATTTTGCACATATGCATCAACAAGCAAAAGAGCCAAGGATATTTTGGTATCTGAAATGTGTTCTTCGGATGGCAAAATATGTCAATTGCCATGGACAGCCACTCCCAGTATGGATCTTTATACAGCTCAAATGAATATGAAAAAGCTCGGTGTAAGCTTAGTTCCCGTTGTCGAGGAGAAAAACAAAGATCACCGGAACAATCCAGTTGGCGTTTTAGACACCGAATGTATCAATTTGACTTGCAGAGCTTTTAAACGGTTCAATTATATTGTTGCAGCGAGAATTGTACGAATTACTGCTCAAGGTTGTAATCGTCGCCTGAGAGGGTCCATCGCCTTCAGAGAAATGGACGATAATGTTGAAACAAAAGGCAAAGTTTGCGTGACAGGAGCTTCTGGTTATTTAGCTTCTTGGCTTGTTAAGCGGCTTCTTTTATCTGGGTATCATGTTGTTGGAACAGTAAGAGATCCAGGAAATGAGAAGAAGTTATCTCATTTGTGGAAGCTGGAAGGAGCGGATGAGAGGTTGCAGTTAGTGAAAGCTGATTTAATGGAAGATGGAAGCTTTGATGATGCTATCATCGGCTGCCATGGTGTCTTTCACACGGCATCCCCAGTTTTAAAGCCATCATCTGATCCAGAGGCAGAAATCTTGAAACCAGCCATTGAAGGCACGTTGAATGTGCTACGTTCATGCAAAAAGAATCCATTTCTAAAGCGTGTGGTGCTCACTTCATCTTCTTCGACTGTGAGAGCAAGAGATGATTTTGACCCGAAAATACCTCTGGACGAGTCATCTTGGAGCTCGATTGACCTCTGCAAAAGACTCCAGGTTTGGTACGTCTTGTCGAAAACTCTGGCCGAAAAGGCTGCGTGGAATTTCTGCAACGAGAATGGGATTGATTTAGTCACTGTTCTTCCCTCCTTCGTAGTTGGTCCGAGTCTACCACTGCATTTATGTTCTACTGCATTAGACATTGTTGGGTTGCTGAAAGGAGAAACAGAGAAATTTCAGTGGCATGGGAGGATGGGCTATGTCCACATTGATGATGTTTCCCTCTGTCATATTCTACTTTACGAGCACCAGAATGCCCGTGGGCGCTACCTTTGCAGCTCAACTGTGCTCGACAACACAGAGCTAGCGTCGTCATTGTCAATCCGCTATCCATCTCTACCAATCCAAAGGTCAGTTTTGCAAGAAGGAGCACTTGCGGCGCAAGGAAAAACCACCGCGGTGCAAGCTGGAGAAACCACTGTGGGGCACGATGGAGAAACTCCTGTGGTGCAACTGGAGACACCGCCCGCGATGCAATATGGAGAAACTATGGCGGTGCAATCTGGCGGAATTGTGCCACAAGCTGAACAACGACTGGTCGGAGGTGCACTGGTTCGTTTCCAACCCGTTGCAGCTGGTTCCCCCTCCCCACTCTTCAGGACAACTTATGTAGAGGAACGGTATGAAGCTGATGTTAAACACCGTTCAATTATTGTGTCTAAAAGAGTAGAATTGGAGTCGTTGGTAGAGTTGGGAATTCAACAATTGTTGGAGGGGGTTGACTTAACTGGGTTGTGCCGAATGGGGGGAGTTATTGTGAGCAGATTGTGA 4608 46.22 MGMQDHKAANTSREQPLASPLQSMRSPPPQTSHFTSMPKETSSWMSRMEELHHMLLTIIQMMEEHLQMAQVQIQKGEERAEERHLRSVFSTSENGAASSPYRSLSITDIIFPEKFGMPNMCYAVNDEAAFAFQQQQSLITLWWINAPLTKSSMYLPLCTFILLFACLPIVPFALQAVRHLLVLTYVSRTMSGTVSATLSGTVSGTTQGIVSGTVSRTLKPINVPFNLPLPPLALPLSAHALDLLPPSHVKKLCPTLATGVIGDGLVEAGEPRFVMDIYGFGLLVIRPSRLVVLALVNTTKRGSRMMMVGCECVALTTFSLQCSHLSPPISAFSNRISALSAASVSPFFYTNSRITHRLELCVYKSLSSLCCLKTRRGLGPLSALPQSGSSEFTVCDTDNDRPPSLRISPNSVSRLDYQEDEGQKGEGGTPFGGGNSAILSSCLVGILTGIGVVLFNNAVHGIRDFFWDGIPYRGASWLREEPVQDIWKRVILVPACGGCLVSILNLLRGSTALRLDNQYDSPPLTKVGSPAQIGIRNSISNQVKAAIKPFLKAVAACVTLGTGNSLGPEGPSVEIGASIAKGVSSLTERNAQGKLSLLAAGSAAGIASGFNAAVAGCFFAVESVLWPSPADSSLSLTNTTSMVILSAVIASVVSEIGLGSEPAFKVPEYDFRSPSELPLYLLLGVLCGLVSLAFSRFTSYMLAYFDNLHMKHGIPKAVFPVIGGVTIGLIALEYPEILYWGFQNVDILLESRPFVKGLSAILLVQLVAVKILATSLCRASGLVGGYYAPSLFIGAATGMAYGKFVGLAVAGSNPVFQLSILEVASPQAYGLVGMAATLAGVCQVPLTSVLLLFELTQDYRIVLPLLGAVGVSSWITSGQTKRGDVKEIKRQKQKNIFINQQSERPTEISTSYATSEEATYASDLCEVESSLCADDSNNEIVDLEKRISVSEAMKTRYVTVLLSTLVIDALSLMLSTKESCAVVVDENNNLIGFLTLEGIQEFCTYASTSKRAKDILVSEMCSSDGKICQLPWTATPSMDLYTAQMNMKKLGVSLVPVVEEKNKDHRNNPVGVLDTECINLTCRAFKRFNYIVAARIVRITAQGCNRRLRGSIAFREMDDNVETKGKVCVTGASGYLASWLVKRLLLSGYHVVGTVRDPGNEKKLSHLWKLEGADERLQLVKADLMEDGSFDDAIIGCHGVFHTASPVLKPSSDPEAEILKPAIEGTLNVLRSCKKNPFLKRVVLTSSSSTVRARDDFDPKIPLDESSWSSIDLCKRLQVWYVLSKTLAEKAAWNFCNENGIDLVTVLPSFVVGPSLPLHLCSTALDIVGLLKGETEKFQWHGRMGYVHIDDVSLCHILLYEHQNARGRYLCSSTVLDNTELASSLSIRYPSLPIQRSVLQEGALAAQGKTTAVQAGETTVGHDGETPVVQLETPPAMQYGETMAVQSGGIVPQAEQRLVGGALVRFQPVAAGSPSPLFRTTYVEERYEADVKHRSIIVSKRVELESLVELGIQQLLEGVDLTGLCRMGGVIVSRL 1535
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 5802220 5820315 + BLOR06800 Blo15g00406 70806

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00406 1535 CDD CBS_pair_voltage-gated_CLC_euk_bac 953 1078 - -
Blo15g00406 1535 ProSiteProfiles CBS domain profile. 953 1009 IPR000644 -
Blo15g00406 1535 MobiDBLite consensus disorder prediction 1 43 - -
Blo15g00406 1535 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1123 1386 IPR036291 -
Blo15g00406 1535 CDD FR_SDR_e 1127 1395 - -
Blo15g00406 1535 Pfam CBS domain 949 999 IPR000644 -
Blo15g00406 1535 PRINTS Chloride channel signature 603 622 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Blo15g00406 1535 PRINTS Chloride channel signature 782 802 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Blo15g00406 1535 PRINTS Chloride channel signature 845 864 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Blo15g00406 1535 PRINTS Chloride channel signature 552 571 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Blo15g00406 1535 PRINTS Chloride channel signature 827 843 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Blo15g00406 1535 Coils Coil 59 79 - -
Blo15g00406 1535 PANTHER CHLORIDE CHANNEL PROTEIN CLC-E 425 1089 - -
Blo15g00406 1535 SUPERFAMILY Clc chloride channel 439 879 IPR014743 -
Blo15g00406 1535 Gene3D Clc chloride channel 434 896 - -
Blo15g00406 1535 Coils Coil 933 953 - -
Blo15g00406 1535 Gene3D - 1121 1420 - -
Blo15g00406 1535 Gene3D - 934 1079 IPR046342 -
Blo15g00406 1535 SUPERFAMILY CBS-domain pair 941 1075 IPR046342 -
Blo15g00406 1535 MobiDBLite consensus disorder prediction 8 43 - -
Blo15g00406 1535 Pfam Voltage gated chloride channel 546 876 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Blo15g00406 1535 CDD Voltage_gated_ClC 445 873 - -
Blo15g00406 1535 Pfam NAD dependent epimerase/dehydratase family 1127 1364 IPR001509 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00406 - - - jre:109006687 868.226
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00891 Blo-Chr10:27891718 Blo15g00406 Blo-Chr15:5802220 4.63E-113 dispersed
Blo14g00630 Blo-Chr14:12172297 Blo15g00406 Blo-Chr15:5802220 9.02E-15 dispersed
Blo15g00406 Blo-Chr15:5802220 Blo08g00107 Blo-Chr8:1116405 1.45E-70 dispersed
Blo15g00406 Blo-Chr15:5802220 Blo07g00854 Blo-Chr7:26930143 2.49E-122 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g326 . Blo15g00406 Bda06g00456 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cla02g01046 . Cec02g1119 Cco02g1153 Clacu02g1100 Cmu02g1060 Cre02g1368 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010114 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 3 2 1 33
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo15g00406 Blo_Chr15 FPKM 21.256199 22.585133 29.30526 29.356329 22.141356 23.47052 25.088268 57.441391 62.814465 63.184269