Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00407 ATGTCTGATAATTCTAATGATAGAAATGGGCGATCTTCTTCAACCTATGAAATTTTGAAAGGAGTAGATATAGTTGAAAGAACGGCATCGTGGGGGCTCACAGTGGAGCCGGATGTGGAAGAAGGAAGTTTTAGAGCTGCAGTGAGTAATGTTCTGAGGGCATCATGGGATGAAGGAAGAAGCAAAAAATCATCAATGGAGTCACAATCAGGAGATCTTCAGAAAGTAGCACAAGAATTGACGGATGCTTTGTCTACCCTTGAGCATACATTCGTTGTCTCCGATGCTACAAAACCAGACTGCCCAATAGTTTACGCCAGCAGTGGGTTTTTCACCATGACTGGCTATTCCTCAGACGAGGTCATTGGAAGGAACTGCCGATTTCTTCAAGGAGCAGACACAGACCAAAATGAAGTTGACAAAATTCGAAATGCAGTGAGGAATGGAAAAAGCTACTGCGGCCGGCTCTTGAACTACAAGAAGAACGGTTCTCCTTTCTGGAATCTTCTCACTGTCACTCCAATTAGAGATGAAAATGGCAAAGCCATCAAATTTATTGGAATGCAGGTTGAGGTCAGCAAATACACAGAAGGCGTGAACGACAAGGCATTGCGTCCAAATGGATTGCCCCAATCATTAATCCGCTATGATGCTCGACAGAAAGAGAAGGCTATGGACTCAATTGAAGAACTTCTCCAGACTGTTAAACACCCTCAATCTCTCACTCGAACTACCAGCCACAATTCTATCTTCAAACGCCAAGAATCTGCACAATCCAAATTTGATTATGCCGAAGCTATCACTACGCCTGGGAGACAGACTTATCAATTGGATCCTAAAGTTGATCTGTCTCCTTCAGGCACATATGGAGATTCGTCAAAGAAATTTGGATTATCGAGTCGGCTTTCCTTGATAGGGTTCAAAGGGATGTCTATGAGCACTACAGGGAGACCGGAACAAAAGACAACCATTGAACCAGAGATTTTGATGACTAATGAAATAGAGCGCACTGACAGTTGGGATCATGGTGAACGCGAAAGGGATATTCGCCAAGGAATTGATTTGGCAACCACGTTGGAACGAATTGAGAAAAATTTTGTGATTACAGATCCTAGAATTCCTGATAATCCAATTATATTTGCATCTGATAGCTTTCTTGAATTGACAGAATATCCACGAGAAGAAGTTTTAGGAAGAAACTGTCGGTTTCTTCAAGGACCTGAAACAGATCAAGCCACTGTGTCCCTGATAAGAGATGCAATCAGAGAACAGAAGGAAGTCACAGTTCAGTTAATCAACTATACAAAGACTGGTAAGAAGTTTTGGAATTTATTCCACTTGCAGCCCATGCGAGACCAAAAGGGTGAGTTGCAATACTTCATTGGTGTACAACTAGACGGAAGTGATGATGTGCAACCTCTGCAAAGCCGTCTTTCAGAGAAAACAGAACAACAAAGTGTGATGTTGGTCAAAGCAACCGCAGAAAATGTGGACGAGGCTGTCCGTGAGCTTCCCGATGCCAACTTGAGACCAGAAGATTTGTGGGCAATTCATTCTAAACCTGTCTTCCCAAAACCTCACAAGAAGGACAATTGCTCTTGGTTAGCAATAAAAAAGATTACTCAACAAGGTGAAAAAATTGGACTACATCATTTTAAACCCTTAAGACCACTGGGTAGTGGAGATACTGGGAGTGTTCACTTAGTAGAACTGGAAGGTTCAGGAGAACTTTATGCTATTAAAGCAATGGACAAGGCTGTAATGTTGAACAGAAACAAGGTTCATAGAGCATGCATCGAAAGAGAAATTATTTCATACCTGGATCATCCTTTTCTTCCGACTTTGTATGCATCATTTCAGACTCCTACACACGTTTGTTTGGTAACAGACTTTTGCGCTGGTGGAGAATTGTATGCATTGCTTGAAAAGCAACCATTGAAAATGTTCAAAGAAGAATCTGCAAGGTTTTATGTGGCAGAGGTTGTCATTGCATTGGAATATCTACACTGCTTAGGAATTATTTATCGGGATTTAAAGCCTGAAAATATTTTAGTCCAAAAGGATGGTCATATTGTATTAGCGGATTTTGATTTGTCATTTTTGACTTCCTCAAAGCCTCAGGTTATAAAGTTTCCATCACAAAGCAAACGGAGGTCAAAGAAGAATCAACCACCACCGGCATTTATTGCTGAACCAGTTTCACACTCAAATTCATTTGTTGGAACTGAAGAGTACATTGCTCCTGAAATTATTACTGGCGCTGGTCACAAGAGTGCTATTGATTGGTGGACTCTGGGTATATTATTGTATGAATTGCTCTATGGACGTTCACCTTTTAGGGGAAAGAACAGGCAGAAGACTTTTACCAACATATTGCACAAAGAACTAACCTTCCCAAGTAGTATTCCGGTAAGTCTTCAAGCAAGGCTGATGATAAAGGGTTTGCTCCAAAGAGACCCAGACGCTCGTTTAGGCTCAAACACCGGTGCCAATGAAATCAAACAACATCCCTTTTTCCGCGGAATCAATTGGCCTCTAATCCGATGCATGACACCGCCCCCACTGGACGTTCCCCTCAAATTGATTGAAAAGGATCCAAATGCAAAGGATATAAAATGGGAAGATGATGGTGTGCTTACCCACTCAATAGATTTGGAGATTTTCTGA 2667 41.62 MSDNSNDRNGRSSSTYEILKGVDIVERTASWGLTVEPDVEEGSFRAAVSNVLRASWDEGRSKKSSMESQSGDLQKVAQELTDALSTLEHTFVVSDATKPDCPIVYASSGFFTMTGYSSDEVIGRNCRFLQGADTDQNEVDKIRNAVRNGKSYCGRLLNYKKNGSPFWNLLTVTPIRDENGKAIKFIGMQVEVSKYTEGVNDKALRPNGLPQSLIRYDARQKEKAMDSIEELLQTVKHPQSLTRTTSHNSIFKRQESAQSKFDYAEAITTPGRQTYQLDPKVDLSPSGTYGDSSKKFGLSSRLSLIGFKGMSMSTTGRPEQKTTIEPEILMTNEIERTDSWDHGERERDIRQGIDLATTLERIEKNFVITDPRIPDNPIIFASDSFLELTEYPREEVLGRNCRFLQGPETDQATVSLIRDAIREQKEVTVQLINYTKTGKKFWNLFHLQPMRDQKGELQYFIGVQLDGSDDVQPLQSRLSEKTEQQSVMLVKATAENVDEAVRELPDANLRPEDLWAIHSKPVFPKPHKKDNCSWLAIKKITQQGEKIGLHHFKPLRPLGSGDTGSVHLVELEGSGELYAIKAMDKAVMLNRNKVHRACIEREIISYLDHPFLPTLYASFQTPTHVCLVTDFCAGGELYALLEKQPLKMFKEESARFYVAEVVIALEYLHCLGIIYRDLKPENILVQKDGHIVLADFDLSFLTSSKPQVIKFPSQSKRRSKKNQPPPAFIAEPVSHSNSFVGTEEYIAPEIITGAGHKSAIDWWTLGILLYELLYGRSPFRGKNRQKTFTNILHKELTFPSSIPVSLQARLMIKGLLQRDPDARLGSNTGANEIKQHPFFRGINWPLIRCMTPPPLDVPLKLIEKDPNAKDIKWEDDGVLTHSIDLEIF 888
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 5827738 5836395 + BLOR06801 Blo15g00407 70807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00407 888 ProSiteProfiles PAS repeat profile. 76 149 IPR000014 -
Blo15g00407 888 SUPERFAMILY PYP-like sensor domain (PAS domain) 367 466 IPR035965 -
Blo15g00407 888 SUPERFAMILY PYP-like sensor domain (PAS domain) 97 189 IPR035965 -
Blo15g00407 888 ProSitePatterns Protein kinases ATP-binding region signature. 558 581 IPR017441 GO:0005524
Blo15g00407 888 SMART serkin_6 552 839 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo15g00407 888 SMART pas_2 78 147 IPR000014 -
Blo15g00407 888 SMART pas_2 353 422 IPR000014 -
Blo15g00407 888 CDD PAS 103 192 IPR000014 -
Blo15g00407 888 Pfam PAS domain 97 193 IPR000014 -
Blo15g00407 888 Pfam PAS domain 374 466 IPR000014 -
Blo15g00407 888 ProSitePatterns Serine/Threonine protein kinases active-site signature. 673 685 IPR008271 GO:0004672|GO:0006468
Blo15g00407 888 CDD PAS 366 466 IPR000014 -
Blo15g00407 888 Pfam Protein kinase domain 554 839 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo15g00407 888 TIGRFAM sensory_box: PAS domain S-box protein 376 466 IPR000014 -
Blo15g00407 888 TIGRFAM sensory_box: PAS domain S-box protein 102 193 IPR000014 -
Blo15g00407 888 ProSiteProfiles PAS repeat profile. 351 424 IPR000014 -
Blo15g00407 888 PANTHER BNAA02G07840D PROTEIN 56 887 - -
Blo15g00407 888 PANTHER FLIPPASE KINASE 1-RELATED 56 887 - -
Blo15g00407 888 Gene3D PAS domain 90 255 - -
Blo15g00407 888 Gene3D Transferase(Phosphotransferase) domain 1 636 853 - -
Blo15g00407 888 Gene3D PAS domain 340 504 - -
Blo15g00407 888 ProSiteProfiles PAC domain profile. 425 479 IPR000700 -
Blo15g00407 888 CDD STKc_phototropin_like 550 863 - -
Blo15g00407 888 Gene3D Phosphorylase Kinase; domain 1 551 635 - -
Blo15g00407 888 ProSiteProfiles Protein kinase domain profile. 552 839 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo15g00407 888 SMART pac_2 153 195 IPR001610 -
Blo15g00407 888 SMART pac_2 428 470 IPR001610 -
Blo15g00407 888 SUPERFAMILY Protein kinase-like (PK-like) 530 866 IPR011009 -
Blo15g00407 888 ProSiteProfiles PAC domain profile. 150 204 IPR000700 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo13g00457 Blo15g00407 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g01095 Blo-Chr13:33094449 Blo15g00407 Blo-Chr15:5827738 0 dispersed
Blo14g00144 Blo-Chr14:1074039 Blo15g00407 Blo-Chr15:5827738 0 dispersed
Blo15g00407 Blo-Chr15:5827738 Blo01g01202 Blo-Chr1:45013736 2.94E-115 dispersed
Blo13g00457 Blo-Chr13:24991902 Blo15g00407 Blo-Chr15:5827738 0 wgd
Blo15g00407 Blo-Chr15:5827738 Blo02g00167 Blo-Chr2:1448810 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84714 PF00069 Pkinase 1.00E-59 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00407 K20715 - jre:108997379 1325.07