Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00413 ATGGTGATAGACTATGTTCTGGAAGACAAAGTTGGTACCACTGAAAGGCTGGCCATTGTATTTGGTTTAATGAGCTTGCCTAATGAGAAGACAATTGGGATATCAGATGAGAGACCCAAATCGATACCTTCATTTTCAGAGTGGGAAGTACTCTTAAGGGGGATTACTGTCGACGATGAAGAATGGAAAACTGCTACTGCAACATATACCAAAGAAACAGATGGCTCCATCATTACAGAAGGTGCTTGTGGTTATGGGGATCTTCACAGGATTAGCTACGGTAAACACAGTGCTGGATTGAGTGGCATTCTGTTCAACAGAGGCAGTACTTGTGGGGCTTGTTATGAGCTTAGATGTGTTGACCACATTTTATGGTGTCTGCAAGGAAGCCCATCTGTGATTCTCACAGCTGCAGATTTCTGCCCTCCAAATTACGGCATGTCGTCCGACTATGGCGGCTGGTGTAATTTCCCCAATGAACACTTTGACATGTCTGAGGCTGCTTTTTCTCAAATTGCAGAGAGGATAGCTGACATTGTACCTGTTCAGTATAGAAGGGTAAAGTGCGACAGAAATGGGGGTATTAGCTTCAGGGTGAGTGGAAATTCGCATTTCTTTCAAGTTTTGATCACAAATGTTGGGGTCGATGGTGAAGTGGTGGGGGTGAAGGTGAAGGGATCAAGAACAGGGTGGATACCCATGGCTAGAAATTGGGGACAGAATTGGCAAAGCAATGTCAATCTTAAAGGGCAGCCTCTTTCTTTTGAGGTAACTACAAGCAGTGGGAAGACATTGACTTCATATAATGTAGCTCCGCCAAACTGGCAGTTTGGTCAGACTTTTGAAGCTAATGTAGAGTTAGCAGGTGGGTCAAGCTTGGAGTTAAGTCTCGGCAACTGGCCGGCGGGCCAGCCCATGCCATTAAATCATTTTCCGTACCAAGCCTTGTCGACCTCAGTGCAAGCTGGCCGCCCCGGCGGACTTGGACAGAAAATAAAAAAAATTATGGCCGATTTGGTGGTTGGACAAAGGCCTGGTACGGTCATGAGGCTGAGTAATTGA 1062 45.86 MVIDYVLEDKVGTTERLAIVFGLMSLPNEKTIGISDERPKSIPSFSEWEVLLRGITVDDEEWKTATATYTKETDGSIITEGACGYGDLHRISYGKHSAGLSGILFNRGSTCGACYELRCVDHILWCLQGSPSVILTAADFCPPNYGMSSDYGGWCNFPNEHFDMSEAAFSQIAERIADIVPVQYRRVKCDRNGGISFRVSGNSHFFQVLITNVGVDGEVVGVKVKGSRTGWIPMARNWGQNWQSNVNLKGQPLSFEVTTSSGKTLTSYNVAPPNWQFGQTFEANVELAGGSSLELSLGNWPAGQPMPLNHFPYQALSTSVQAGRPGGLGQKIKKIMADLVVGQRPGTVMRLSN 353
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 5885000 5888079 - BLOR06807 Blo15g00413 70813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00413 353 SUPERFAMILY PHL pollen allergen 191 282 IPR036749 -
Blo15g00413 353 SUPERFAMILY Barwin-like endoglucanases 61 212 IPR036908 -
Blo15g00413 353 PANTHER EXPANSIN-A15 55 283 IPR002963 GO:0009664
Blo15g00413 353 Gene3D - 53 190 IPR036908 -
Blo15g00413 353 Pfam Lytic transglycolase 99 184 IPR009009 -
Blo15g00413 353 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 204 283 IPR007117 -
Blo15g00413 353 SMART dpbb_1 97 184 IPR007112 -
Blo15g00413 353 PANTHER EXPANSIN-A20 55 283 - -
Blo15g00413 353 Gene3D - 191 287 IPR036749 -
Blo15g00413 353 PRINTS Expansin signature 119 130 IPR002963 GO:0009664
Blo15g00413 353 PRINTS Expansin signature 92 106 IPR002963 GO:0009664
Blo15g00413 353 PRINTS Expansin signature 193 205 IPR002963 GO:0009664
Blo15g00413 353 PRINTS Expansin signature 240 261 IPR002963 GO:0009664
Blo15g00413 353 PRINTS Expansin signature 133 143 IPR002963 GO:0009664
Blo15g00413 353 PRINTS Expansin signature 152 169 IPR002963 GO:0009664
Blo15g00413 353 PRINTS Expansin signature 169 182 IPR002963 GO:0009664
Blo15g00413 353 PRINTS Expansin signature 205 226 IPR002963 GO:0009664
Blo15g00413 353 PRINTS Expansin signature 269 285 IPR002963 GO:0009664
Blo15g00413 353 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 80 194 IPR007112 -
Blo15g00413 353 Pfam Expansin C-terminal domain 195 272 IPR007117 -
Blo15g00413 353 PRINTS Expansin/Lol pI family signature 101 119 IPR007118 GO:0005576
Blo15g00413 353 PRINTS Expansin/Lol pI family signature 177 193 IPR007118 GO:0005576
Blo15g00413 353 PRINTS Expansin/Lol pI family signature 61 76 IPR007118 GO:0005576
Blo15g00413 353 PRINTS Expansin/Lol pI family signature 79 97 IPR007118 GO:0005576
Blo15g00413 353 PRINTS Expansin/Lol pI family signature 269 283 IPR007118 GO:0005576
Blo15g00413 353 PRINTS Expansin/Lol pI family signature 231 245 IPR007118 GO:0005576
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo15g00413 Blo-Chr15:5885000 Blo13g00766 Blo-Chr13:30398246 1.22E-86 dispersed
Blo15g00413 Blo-Chr15:5885000 Blo13g00832 Blo-Chr13:31013777 6.78E-90 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00413 - - zju:107425594 416.772