Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00440 ATGGCGGATTCAGACAACGAATCAGGAGGGCATAATAGCAACACGAATAGCGAGCACTCGAGGGAGCAAGATAGATTCTTACCCATAGCCAATGTAAGCAGAATAATGAAGAAAGCACTACCAGCAAACGCCAAGATCTCGAAAGACGCAAAAGAAACAGTTCAAGAGTGTGTATCGGAGTTCATTAGCTTCATCACCGGCGAGGCTTCCGATAAGTGCCAGAGGGAAAAAAGGAAGACGATCAACGGCGACGATTTGTTGTGGGCCATGACTACTCTAGGATTCGAAGAGTATGTAGAGCCTCTGAAAATTTATCTGCAGAAGTACAGAGAAACGGAAGGAGAGAAGACTTCTGTCGGAAGACAGGGTGAAAAAGACGGCGGCGTAGGTGGGTCCAGCTCCGCCAGTGTTGATGCCGCCGGTGCTGTAAGTGGTGGCGGCTACAATGGAGTCGGCGGGATGTACGGTGGGATGATAATGATGGGCCATCATCAGGGACACGCATACGGTTCAGGCGGATATCATCGGATGGGAATCGGTGGTCAGAAAGACGGATCCGGCGGTCCAGCTTCCGGCAACCGGTGA 585 51.11 MADSDNESGGHNSNTNSEHSREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKIYLQKYRETEGEKTSVGRQGEKDGGVGGSSSASVDAAGAVSGGGYNGVGGMYGGMIMMGHHQGHAYGSGGYHRMGIGGQKDGSGGPASGNR 194
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 6493752 6494336 - BLOR06834 Blo15g00440 70840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00440 194 MobiDBLite consensus disorder prediction 1 24 - -
Blo15g00440 194 Gene3D Histone, subunit A 13 139 IPR009072 GO:0046982
Blo15g00440 194 PRINTS CCAAT-binding transcription factor subunit A signature 54 72 - -
Blo15g00440 194 PRINTS CCAAT-binding transcription factor subunit A signature 73 91 - -
Blo15g00440 194 PRINTS CCAAT-binding transcription factor subunit A signature 92 110 - -
Blo15g00440 194 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 26 90 IPR003958 -
Blo15g00440 194 MobiDBLite consensus disorder prediction 113 136 - -
Blo15g00440 194 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 173 IPR027113 GO:0001228|GO:0006355|GO:0016602
Blo15g00440 194 MobiDBLite consensus disorder prediction 1 16 - -
Blo15g00440 194 SUPERFAMILY Histone-fold 23 125 IPR009072 GO:0046982
Blo15g00440 194 ProSitePatterns NF-YB/HAP3 subunit signature. 57 73 IPR003956 GO:0005634|GO:0006355|GO:0043565
Blo15g00440 194 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-3 1 173 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo13g00439 Blo15g00440 CCT
Blo13g00439 Blo15g00440 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo12g00456 Blo-Chr12:22128268 Blo15g00440 Blo-Chr15:6493752 4.31E-58 dispersed
Blo13g00735 Blo-Chr13:30178003 Blo15g00440 Blo-Chr15:6493752 4.68E-58 dispersed
Blo10g00864 Blo-Chr10:27339437 Blo15g00440 Blo-Chr15:6493752 3.03E-73 transposed
Blo04g00929 Blo-Chr4:10990813 Blo15g00440 Blo-Chr15:6493752 4.79E-58 transposed
Blo15g00440 Blo-Chr15:6493752 Blo02g00141 Blo-Chr2:1233511 2.25E-110 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13334 PF00808 CBFD_NFYB_HMF 1.80E-27 CL0012 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00440 K08065 - csv:101219076 266.159