Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00444 ATGCAGAGCCCCTCCACACTTATTCCTCCAATTTTCATGACTGATGAGCACGGCCGGTGCTCGGAATGGAACGATGCTATGCAAACGTTATCTGGTTTGAAGAGAGAAGAGGCAATTGATAAGATGCTTCTTGGAGAGATCTTCACCATCAATAGTGTCGGTTGTCGGGTGAAAGATCCAGACACATTCACGAAGCTTAAAATTTTGTTTAATAGGGTGGTTTCAAACCAGGATGTCGATAAATTGTTGTTTGGTTTTTTTGATAGGCAGAACAATTACGTTGAAGCTTTAGTTTCCGCAGACAAAAGGGTCGATGCAGAGGGGAGAATAACGAGAGTTTTATGTTTTTTGCATGTGGCGAGTCTGGAACTTAAACATGCTATCCATATGCAGAAAATATCGGAACAGGCTGCAGATGATAGCGTCAAGAAGTTAACGTATCTTCGGAGGGAGATCAGAAAACCGCTAAGTGGGATTCAGTTTATGCAGAATCTCATGGGTTCTTCTGATATAAGCGCAGAGCAAAAGCAGCTACTCAAGATAAGCACATCCTGTCAGGATCAATTGGTCAAGATTGTCGATGAAACTGATATCGAAAATATCGATGAATGCTTTATGGAGATGAGCTCTTGTGAATTCAACCTGGGAGATGTTCTTGAAGTTGTCATGAATCAAGTTATGGCTTTAGGCCAAGAACGTCGAATCCAGGTGATCCTCAATTCTCCTTCAGATGCGTCATCGTTGCATTTGTATGGCGACAATTTAAGGCTTCAGCAGGTACTTTCGGATTATTTGAGTTGCGCTGCCGTCTTCGTCCCGGCATCTGAAGGATCTTCGGTTTCCCTTGAAGTGATTCCTAAGAAAAAACATATCGGATCAAAAATGTGTATCATTCATCTCGAATTTAGGATCATTCATCCATCGCCTGGAATTCCCGAGATTTTAATCCAAGAGATGTTTCATCACAACAATAATGTCTCAAAGGAAGGTCTTAGTCTATATATCAGCCAGAAGCTTGTGAAGATCATGAATGGCACTGTACAATACCTGAGAGAGGCAGAGAGATCATCCTTCATTATTATAATCGAATTCCCACTGGTGAAAAAGATTGATAAATGA 1119 41.29 MQSPSTLIPPIFMTDEHGRCSEWNDAMQTLSGLKREEAIDKMLLGEIFTINSVGCRVKDPDTFTKLKILFNRVVSNQDVDKLLFGFFDRQNNYVEALVSADKRVDAEGRITRVLCFLHVASLELKHAIHMQKISEQAADDSVKKLTYLRREIRKPLSGIQFMQNLMGSSDISAEQKQLLKISTSCQDQLVKIVDETDIENIDECFMEMSSCEFNLGDVLEVVMNQVMALGQERRIQVILNSPSDASSLHLYGDNLRLQQVLSDYLSCAAVFVPASEGSSVSLEVIPKKKHIGSKMCIIHLEFRIIHPSPGIPEILIQEMFHHNNNVSKEGLSLYISQKLVKIMNGTVQYLREAERSSFIIIIEFPLVKKIDK 372
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 6508401 6509778 + BLOR06838 Blo15g00444 70844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00444 372 SUPERFAMILY PYP-like sensor domain (PAS domain) 10 117 IPR035965 -
Blo15g00444 372 Gene3D PAS domain 6 118 - -
Blo15g00444 372 CDD HATPase_Phy-like 251 364 IPR044767 -
Blo15g00444 372 ProSiteProfiles PAS repeat profile. 1 48 IPR000014 -
Blo15g00444 372 CDD PAS 7 118 IPR000014 -
Blo15g00444 372 Pfam PAS fold 6 118 IPR013767 GO:0006355
Blo15g00444 372 PANTHER PHYTOCHROME C 1 368 - -
Blo15g00444 372 ProSiteProfiles Histidine kinase domain profile. 147 368 IPR005467 -
Blo15g00444 372 PANTHER TWO-COMPONENT HISTIDINE KINASE 1 368 - -
Blo15g00444 372 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 252 365 IPR003594 -
Blo15g00444 372 SMART HKATPase_4 252 368 IPR003594 -
Blo15g00444 372 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 213 365 IPR036890 -
Blo15g00444 372 CDD HisKA 145 195 IPR003661 GO:0000155|GO:0007165
Blo15g00444 372 Gene3D - 178 360 IPR036890 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo02g00140 Blo15g00444 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo15g00444 Blo-Chr15:6508401 Blo18g00692 Blo-Chr18:15174709 9.83E-97 dispersed
Blo15g00444 Blo-Chr15:6508401 Blo02g00140 Blo-Chr2:1219131 9.49E-171 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00444 - - zju:107433896 537.724