Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00498 ATGTGGGTGGTTTTTGTTGATTCTATTCGGGGCGAGAGTCTTCCTGTCGTGAACGTTGGTGCAGTTTTTACTTTCGATTCGGTCATTGGTAGAGCCGCAAAAACAGCAATGGACGCCGCCGTCTCGGACATAAATGCCGACCCGACCATTCTCAACGGGACAGAGCTGAATTTGATTATGGAGGACGTAGACTGCAATGTTTTCCTGGGTGCCATTAGAGTTTGGCTCGAGGTTTTTCAGTACTTCTCTCAGTTATTCAAATTTAATTACCTTGCCAGAAACGTGCTTGAGAAAGAGGTTGTGGCCATTGTAGGGCCTCAGTCTTCTTCCATAGCTCATATGATTTCTCAGATTGCCAATGGTTTGCAAGTGCCCCTTGTCTCATATGCTGCAACTGATCCAACTTTGTCAAGCCTCCAATTTCCTTACTTTGTCCGAACTACACCAAGTGATTCCTATCAAATGGCTGCCATGGCTGACTTGATTGACTTCTATGGGTGGAAAGAGGTCATCGCCATCTTCGAGGACAACAATTATGGAAGAAACGGAATATCTGCTTTAGATAATGAGCTCCAGAAGAAGATGGCTAAACTTTCTCATAAATTGCCCATGCATTCCTTATTTAATGACAGTGAGATCGCTCATTTGCTCAATAATTCAAAATTACTTGGTCCTCGTGTGTATGTAGTTCATGTTAGTCCTGATCCCAGCTTAAGAATATTTAAAATTGCTGACAAGCTTCAAATGATGACCAACAATTATGTATGGCTTGCTACAGATTGGCTTTTAGCAACATTTGATTCACTCGCTCCTACGCATCCATCTTCACTGGATATCCTTCAAGGCATTGTCGGACTCCGTCAACATTTTCCAGAATCGAATAAGAAGACAGCTTTTTTGTCTCGATTGGGCAAGCAAGAAGGTTCCAGAAGTTCTGTGCATAATTCTTATGCACTTACTGCTTACGATACAATATGGTTAGTTGCTCGCTCAATTGATAAGTTTCTAAAAATGGATGGGAACTTGACATTTTCCTTGACAAATAAGTTACAAAATGTGAACGCATCTAGAATTCACCTGGGCGATCTCAAAGTCTTTAGTGGTGGAGATCTTCTTCTGAGCATACTATTGCAAACAAATTTCACTGGTTTAACCGGTCAAGTTCGATTTAGTTCAGATCGAAATCGTGTTGGTGGCAGTTATGGTGTGATAAACATTGACCAAGGAACTGCGCGGGAAGTTGGTTTTTGGTCTAATGTCTCAGGGTTTACAGTTTTACCACCAGAAACCCTTAATGAGAAACAAATTAACTATTCTCATCTAAATCAGGAGCTTGGCAATGTGACTTGGCCTGGTGGAGCGACAAAGAGTCCACAGGGCTGGGTTATTGCAGATGATGCGAGGCCACTGAAAATTGGAGTGCCCTACAGAGCTAGTTTTGTTGAATTTGTCACAGAATCGAACAACACCCACAAGATTCAAGGATACTGCATTGACGTGTTCATTGAGGCACGGAAGTTGGTCCCTTACAACGTTCCATATACATTCGTGCCTTTTGGAGATGGCCATGTCAATCCCAGTTACTCCGACCTTGTGAAGAATGTTGCAAATAATGTGTTTGATGCTGCCGTTGGAGATATAGCAATTGTGACAAACCGAACAAAGATTGTGGATTTTTCACAGCCTTTTATTGCAACTGGTCTTGTTATTGTTGCCCCAATTGAAAATTCAAAATCTAGCGCTTGGGTTTTCCTCAGACCCTTTACAGTGGAGATGTGGTGCGTCACTGCAGCATCATTTCTCGTGGTTGGAATCGTTATATGGATTCTTGAGCGTCCAGTTAATAATGATTTCCAAGGCACTCCGAAAAGGCAGATTTTGACAGTTTTATTGTTCAGCTTCTCAACGCTTTTTAAGACAAATCAGGAAGTTATGGTTAGCCCACTGGCAAGGATGATTATGGTGATCTGGCTTTTCTTATTGATGGTTATCACTTCAAGCTACACGGCAAGTTTGACTTCGATCCTTACAGTTCAGCAGCTTTCGTCTCCTATCACTGGAATCGACAGCTTAATTGCAAGTAATTGGCCTATTGGATACCAGGTAGGGTCCTTTGTCCACAGCTATCTGACCGAGAACCTATACGTGCACGGATCAAGACTTGTTTCTCTAGGCTCTCCGGAAGAGTATGAAAAAGCGCTTCGACTAGGGCCTCATCATGGGGGAGTGGCTGCCATTATAGACGAGCTTCCATATGTGGAGTTGTTTTTGTCGAGAACTCTCGATTTTGGGATTATTGGGCAGACGTTTACCAAAAGCGGCTGGGGTTTTGCTTTCCAGAGAGACTCTCCTCTTGCTATTGACATTTCCACTGCAATCTTGAAACTTTCCGAGAATGGAGAGCTTCAAAAAATACGCGAGAAGTGGTTTTGTCAAATGGGTTGCCCCGGCGATAGAATACATAAATCCTCACCCAACCAGCTTCCCTTGATGAGCTTCTGGGGTTTATATCTCCTCTGTGGGATGCTTTGTGTAGCTGCTCTGTTCTTATTTCTACTGAGAACTGTCCGACAATTCAAGCGATACAAACAAAGGCTCATCGACACTTCTTCTGCTTCCCCGGCAGCATCATTAACTGCCCGTTGGTCAATTCGTCACTTTCTCGACTTTGTTGACGAAAGGGAAGAGGCCATCAAGAATTTCTTCAGACAGCAAGACTCTCCAGCAATTCCGGCTTCAGATACTGCCAACGTATGA 2757 43.24 MWVVFVDSIRGESLPVVNVGAVFTFDSVIGRAAKTAMDAAVSDINADPTILNGTELNLIMEDVDCNVFLGAIRVWLEVFQYFSQLFKFNYLARNVLEKEVVAIVGPQSSSIAHMISQIANGLQVPLVSYAATDPTLSSLQFPYFVRTTPSDSYQMAAMADLIDFYGWKEVIAIFEDNNYGRNGISALDNELQKKMAKLSHKLPMHSLFNDSEIAHLLNNSKLLGPRVYVVHVSPDPSLRIFKIADKLQMMTNNYVWLATDWLLATFDSLAPTHPSSLDILQGIVGLRQHFPESNKKTAFLSRLGKQEGSRSSVHNSYALTAYDTIWLVARSIDKFLKMDGNLTFSLTNKLQNVNASRIHLGDLKVFSGGDLLLSILLQTNFTGLTGQVRFSSDRNRVGGSYGVINIDQGTAREVGFWSNVSGFTVLPPETLNEKQINYSHLNQELGNVTWPGGATKSPQGWVIADDARPLKIGVPYRASFVEFVTESNNTHKIQGYCIDVFIEARKLVPYNVPYTFVPFGDGHVNPSYSDLVKNVANNVFDAAVGDIAIVTNRTKIVDFSQPFIATGLVIVAPIENSKSSAWVFLRPFTVEMWCVTAASFLVVGIVIWILERPVNNDFQGTPKRQILTVLLFSFSTLFKTNQEVMVSPLARMIMVIWLFLLMVITSSYTASLTSILTVQQLSSPITGIDSLIASNWPIGYQVGSFVHSYLTENLYVHGSRLVSLGSPEEYEKALRLGPHHGGVAAIIDELPYVELFLSRTLDFGIIGQTFTKSGWGFAFQRDSPLAIDISTAILKLSENGELQKIREKWFCQMGCPGDRIHKSSPNQLPLMSFWGLYLLCGMLCVAALFLFLLRTVRQFKRYKQRLIDTSSASPAASLTARWSIRHFLDFVDEREEAIKNFFRQQDSPAIPASDTANV 918
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 8409922 8413882 + BLOR06892 Blo15g00498 70898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00498 918 SMART GluR_14 471 812 IPR001320 GO:0015276|GO:0016020
Blo15g00498 918 Gene3D - 581 712 - -
Blo15g00498 918 Gene3D - 468 580 - -
Blo15g00498 918 Pfam Bacterial extracellular solute-binding proteins, family 3 483 810 IPR001638 -
Blo15g00498 918 PANTHER GLUTAMATE RECEPTOR 3.7 5 909 - -
Blo15g00498 918 Gene3D - 150 423 - -
Blo15g00498 918 Gene3D - 35 398 - -
Blo15g00498 918 CDD GluR_Plant 468 810 - -
Blo15g00498 918 Gene3D - 758 817 - -
Blo15g00498 918 PRINTS Metabotropic glutamate GPCR signature 45 64 IPR000337 GO:0004930|GO:0007186|GO:0016021
Blo15g00498 918 PRINTS Metabotropic glutamate GPCR signature 170 187 IPR000337 GO:0004930|GO:0007186|GO:0016021
Blo15g00498 918 PRINTS Metabotropic glutamate GPCR signature 154 170 IPR000337 GO:0004930|GO:0007186|GO:0016021
Blo15g00498 918 PRINTS Metabotropic glutamate GPCR signature 135 154 IPR000337 GO:0004930|GO:0007186|GO:0016021
Blo15g00498 918 PRINTS Metabotropic glutamate GPCR signature 103 129 IPR000337 GO:0004930|GO:0007186|GO:0016021
Blo15g00498 918 SUPERFAMILY Periplasmic binding protein-like I 16 461 IPR028082 -
Blo15g00498 918 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 5 909 - -
Blo15g00498 918 CDD PBP1_GABAb_receptor_plant 18 425 IPR044440 -
Blo15g00498 918 PIRSF IGluLR_plant 1 914 IPR017103 -
Blo15g00498 918 SUPERFAMILY Periplasmic binding protein-like II 448 811 - -
Blo15g00498 918 Pfam Ligand-gated ion channel 811 841 IPR001320 GO:0015276|GO:0016020
Blo15g00498 918 Pfam Receptor family ligand binding region 34 407 IPR001828 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo15g00498 Blo-Chr15:8409922 Blo18g00248 Blo-Chr18:2559804 4.92E-144 dispersed
Blo15g00498 Blo-Chr15:8409922 Blo15g00499 Blo-Chr15:8416282 0 tandem
Blo15g00498 Blo-Chr15:8409922 Blo02g00114 Blo-Chr2:837458 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00498 K05387 - csv:101215715 1192.18