Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00503 ATGATGTCACTCTCCCTTAGACTGTTGTCCTACAATGATCAGACTGAAAAGAAAAGAAAAATAAAAGAAGGATTGTTTTTAGGTGCTGCATCTCATAAACATGTCATATGTTGCATTATGTATGTTTCATGTGTTATGTTACCTTCCTTGCTGAGTATAAGGGCAAAGGGTGGTAGTATGAAATCAACTGCCGTGGGAAGGTGTCTCCCTGATTCTATATCAGGCCCCAGCGGCCAACACAAAGACTCTTTTGTCAGTGATGGCAAAGGTGGGACCTGGGGAGCTACCGATATCGAGATGGGCACGAGAGAGCCGCAGAGAAACGGAGATATGGGAATGGAAGCTTTCAATAAGCAGATACAAGAGATTGAGAAACAAGTGGATAGACTCTCTGGATTCCTTGTTAAACTTAAGGAAGCTAATGAGGAATCAAAATCTGTTACGAAAGCGACTGCCATGAAAGCTATCAAGAAGCGGATGGAGAAAGATATCGATGAAGTGGGAAAGATTGCACGTAATGTGAAAACAAAGCTGGAAGCAATAAACAAAGAAAATTTAGCCAATAGAGAGAAGCCCGGATGTGGAAAGGGTACAGCTGTTGATCGGGCCAGAATGAACGTGACAAATGCTCTGACGAAGAAGTTTAAGGAGATAATGATTGAGTTTCAGTTTCATCCCGTCCTCTTATCTGTATGTTTTCTCTATCAGACACTACGACAAAGAATTCAAGATGAATATCGTGAAGTTGTGGAAAGAAGAGTCATTACAGCAGTAACTGGAACCAGACCAGATGAACAGACTATTGACCACCTCATCGAAACCGGAAATAGCGAGCAAATCTTCCAGAAGGCGATTCAAGAATCAGGACGAGGACAGGTTATCAATACATTGGAAGAAATCCAGGAGAGGCATGATGCTGTAAAAGAAATCGAGGAAAAGCTTCTCGAGTTACATCAGATTTACCTCGATATGGCAGTCTTAGTGGAGGCTCAAGGCGAAATTCTCGACAACATAGAAAACCAGGTTACGAATGCGGTTGATCACGTACAATCAGGGACGACTATGCTCCAAAATGCGAAGAAACTCCAGAGGAACTCTCGAAAGTGTATGTGCATTGCAATTCTTATTCTGTTGATCATAGTTGCTGTAATAGTCTTCGGAATCATCCAACCTTGGAAGAAGAAGGGAGTGTAA 1194 42.13 MMSLSLRLLSYNDQTEKKRKIKEGLFLGAASHKHVICCIMYVSCVMLPSLLSIRAKGGSMKSTAVGRCLPDSISGPSGQHKDSFVSDGKGGTWGATDIEMGTREPQRNGDMGMEAFNKQIQEIEKQVDRLSGFLVKLKEANEESKSVTKATAMKAIKKRMEKDIDEVGKIARNVKTKLEAINKENLANREKPGCGKGTAVDRARMNVTNALTKKFKEIMIEFQFHPVLLSVCFLYQTLRQRIQDEYREVVERRVITAVTGTRPDEQTIDHLIETGNSEQIFQKAIQESGRGQVINTLEEIQERHDAVKEIEEKLLELHQIYLDMAVLVEAQGEILDNIENQVTNAVDHVQSGTTMLQNAKKLQRNSRKCMCIAILILLIIVAVIVFGIIQPWKKKGV 397
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 8565426 8569620 + BLOR06897 Blo15g00503 70903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00503 397 Pfam Syntaxin 116 332 IPR006011 GO:0016020
Blo15g00503 397 Gene3D - 109 225 - -
Blo15g00503 397 SUPERFAMILY t-snare proteins 110 352 IPR010989 GO:0016020|GO:0016192
Blo15g00503 397 CDD SNARE_syntaxin1-like 296 357 - -
Blo15g00503 397 Gene3D - 290 390 - -
Blo15g00503 397 PANTHER SYNTAXIN 83 389 IPR045242 -
Blo15g00503 397 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 297 359 IPR000727 -
Blo15g00503 397 SMART tSNARE_6 292 359 IPR000727 -
Blo15g00503 397 PANTHER SYNTAXIN OF PLANTS 122 PROTEIN 83 389 - -
Blo15g00503 397 Coils Coil 297 317 - -
Blo15g00503 397 Coils Coil 120 140 - -
Blo15g00503 397 Pfam SNARE domain 333 385 IPR000727 -
Blo15g00503 397 CDD SynN 113 284 IPR006011 GO:0016020
Blo15g00503 397 SMART SynN_4 108 247 IPR006011 GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g01428 Blo-Chr7:34256633 Blo15g00503 Blo-Chr15:8565426 1.33E-11 dispersed
Blo14g00365 Blo-Chr14:3972538 Blo15g00503 Blo-Chr15:8565426 8.42E-75 dispersed
Blo15g00503 Blo-Chr15:8565426 Blo15g00703 Blo-Chr15:22339372 4.37E-46 dispersed
Blo15g00503 Blo-Chr15:8565426 Blo08g00183 Blo-Chr8:2085505 8.50E-69 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00503 K08486 - csin:114266620 464.151