Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00541 ATGGCTCACTTGACGGACCTTTTGTGTCCAAAGATCAGCACTCGGCTCGCCAAACTACAACTTGCCGGGCGAAATTGGAGCCCCCAGTTTGCAGGAGCTGCCCAGTTTGAGGTCACCAATGGTAACGAACAGTACTCTGTCGATTTGGACAGGTGTACTTGTACATGTTACCGGTGGGAGTTGACCGGCATCCCATGTGTCCATGCAGTCCCGTGCATTCACTTCATGAGGAGATCCCATGAGGAGTTTGTGCATGCGTGCTATCATCGAGAAACATACATGGCGATGTACTCCCACTTTATCCGGCCTGTCAATGGACCGATCGAGTGGCAGCGGGTGACGAATTTTGATCCTATTATCCCACCGCCATTTAAAAGGCTTCGAGGAAGACCGCGCAAACGTAGAATACGAGATGTGGACGAGGCTCCAAGCCGGACAGTGCTGAGCAGAAGAAATGTGAACGTCACTTGTGGTCGGTGTGGGCGTGTTGGGCACAATTCTCGCACATGCGATGGTGGAGGTGAGTCAAGTGCCGGGGCTTGTAGAGGGCGAGGCAGAGGCAGGGGTGGCAGAGGTAGGGGTGGCAGAGGCAGGTCAGAGGGAACATTTATGGGGTTCAGAGTTCCTGAGACAGCCCCCGAGACAATTCCTGACCTAGTTCTTGAGACAGCTCCCGACAGAGTTCCTGACACGCAGGAAGATATAGCGATTATTTTCAATAAAGCAGATAAGAACAAGTCAGGAAGTTTGAATCTGCTTAAACAGAAGCACAGAAACACCGCACTGAATTGGACATTGGAAGTGTTTAAATCAGCTCTTTCAGAAGTGGATTCTCAGATGAAGAACCTTCCGGCCACAGCTCAGGTGGGATTCAATTTCAGTTTTCTGCAACAGGTAGCTGCTCAACAAGGTGAGTATCTCGCAATATGGAAGAATGTGAGAAATATCCAGAAGGTCCTCAGATTCAGAGGTATAGGGCGTCACCGATTTCATCCTTTCAGATACGAAAACGACATTGCAGATCCAAAAAGCTTGTCTATTTCTTCTCCAACGGCGGTTGATATATGGGTCATTGTTTCCAGGTACAGGCATTTGGGGCAGTTTGCTCCTCTCGGAGGAGAGCAAACAGCGGCCCAACTTCCGTAG 1146 50.09 MAHLTDLLCPKISTRLAKLQLAGRNWSPQFAGAAQFEVTNGNEQYSVDLDRCTCTCYRWELTGIPCVHAVPCIHFMRRSHEEFVHACYHRETYMAMYSHFIRPVNGPIEWQRVTNFDPIIPPPFKRLRGRPRKRRIRDVDEAPSRTVLSRRNVNVTCGRCGRVGHNSRTCDGGGESSAGACRGRGRGRGGRGRGGRGRSEGTFMGFRVPETAPETIPDLVLETAPDRVPDTQEDIAIIFNKADKNKSGSLNLLKQKHRNTALNWTLEVFKSALSEVDSQMKNLPATAQVGFNFSFLQQVAAQQGEYLAIWKNVRNIQKVLRFRGIGRHRFHPFRYENDIADPKSLSISSPTAVDIWVIVSRYRHLGQFAPLGGEQTAAQLP 381
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 10487129 10489301 - BLOR06935 Blo15g00541 70941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00541 381 PANTHER NADH DEHYDROGENASE 361 381 IPR045024 GO:0003954|GO:0006116
Blo15g00541 381 ProSiteProfiles Zinc finger SWIM-type profile. 45 77 IPR007527 GO:0008270
Blo15g00541 381 MobiDBLite consensus disorder prediction 169 204 - -
Blo15g00541 381 PANTHER NADH DEHYDROGENASE 252 336 IPR045024 GO:0003954|GO:0006116
Blo15g00541 381 SMART 26again6 52 79 IPR006564 GO:0008270
Blo15g00541 381 PANTHER - 252 336 - -
Blo15g00541 381 Pfam SWIM zinc finger 37 70 IPR007527 GO:0008270
Blo15g00541 381 PANTHER - 361 381 - -
Blo15g00541 381 ProSiteProfiles Zinc finger CCHC-type profile. 157 170 IPR001878 GO:0003676|GO:0008270
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00667 Blo15g00541 CCT
Blo02g00094 Blo15g00541 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo15g00541 Blo-Chr15:10487129 Blo01g01449 Blo-Chr1:53488474 1.83E-153 dispersed
Blo15g00541 Blo-Chr15:10487129 Blo02g00094 Blo-Chr2:641902 4.09E-31 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00541 - - qsu:112003062 138.272