Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00550 ATGGGGGGTTGTATATCTACGAGTAGCCATAGTAGTTGCAGTAGCACAAGCAATGGGGAAGCAGTTTCTTCTTCCTGCCTAGGTTTAGTGGTTTATGATCAGCAGAGAAGCAAGAGAACGTTTTCTGATCGAATCGTTTCACCTCATCGTTCAGCCTTGTTGCCAAGCCGAATGGTCACCAATGGAAAGACTCCGACTGCTTGCATTTTCACCCAACAGGGCCGCAAGGGAATTAACCAGGATGCCATGATTGTGTGGGAAGATTTCATGTCTGGAGATGTAACGTTTTGTGGTGTTTTTGATGGTCATGGGCCTCACGGCCATCTTGTTGCTCGGAAAGTGAGAGATGCTTTACCAAAAAAGCTTCTGTCATTCTTGCTTTCTTCCCATTCGGAGCAAAACGGATCTGGTCGAAACTGTTTCAGCAGGAAATCCAAGAAAGAAGAAGATGGAGATGCAGAGAAGGATGTCTCAGCAGAAGATAAATCGGATTCTGCCTGGAGGGAAGCATTCCTCAGGTCATACAAAGCCATGGACAAGGAGCTAAGATCCCATCCAAATCTGGACTGTTTCTGCAGTGGCAGTACTGCCGTAACTATAATCAAACAGGGCTCGAATCTGTTCATGGGAAATATTGGGGATTCTCGAGCGATTCTTGGATCGCGGGGAAGTGATGATTCCATGGTGGCAATCCAATTGACTGTTGATCTGAAGCCTGATTTGCCCAGAGAAGCTGAAAGGATAAAACAATGCAAAGGTAGAGTCTTTGCATTGCAGGATGAGCCTGAAGTGCCAAGAGTCTGGCTGCCATTTGACGATGCACCCGGGCTAGCCATGGCTCGAGCTTTCGGAGATTTCTGTTTGAAGGAATATGGTGTGATCTCTATACCAGAATTCTCCCATCGAATACTCACAAACAAAGATCAGTTCATCGTACTCGCCTCAGATGGGGTATGGGATGTGTTGAGTAATGAGGAGGTGGTGGAGATTGTGTCTACGGCTCCAACGAGATCATCGGCTGCAAGAGTCCTGGTCGACAAAGCCGCTCAAGAATGGAAGCTCAAATACCCAACATCGAAGATGGACGATTGTGCTGTCGTTTGCCTATTTCTGGATGGAAAAATGGACTCTGAATCGGATTATGATGAACAAGGTTCTTCATCTGTAATTCTTCAAAGAGATCATTCTGGCATCGATACAATCGAATCAGATGGTACCCAGAAGAGTGAGCCAACTTTGCGGCGAAACTACACTGTCCGATCATCGGGAGACGACGAAATTTCTGAGAAATTGCCTGTCGAAGTGGAAGAAAGAGTTGCAACTGAAGATCAGAACTGGCTTAGAGAATGGAAGAAGACTGGCTGTGACTGTGCTGTCTGGTTGAGCTTTTGTGTATTTAAATTGCAAGAAAAGTGGTTCATCTTCTTCATTGCTGGCATGGCCGGGCCCTGTTTTGAAGGACGTGACATCCATGAAAGCTCCGAAAACATCGACGAGAAACAGCCAGAGTGGTTTTTCGGATCAGATGGAAGCAACCCCATTCCAGAGATTGGGGGGTTCCCCCTACCATTTTCCTCGGGTAGTTCCGGGGGAGGTTCTAGTGGTGGCTATGTTCCAGGTGGGGATGATACTCTCGCCCCAAATCCCGGCTGCTATCTTGGACCTGATCCAGCACCCACCTATCCTTAA 1689 47.19 MGGCISTSSHSSCSSTSNGEAVSSSCLGLVVYDQQRSKRTFSDRIVSPHRSALLPSRMVTNGKTPTACIFTQQGRKGINQDAMIVWEDFMSGDVTFCGVFDGHGPHGHLVARKVRDALPKKLLSFLLSSHSEQNGSGRNCFSRKSKKEEDGDAEKDVSAEDKSDSAWREAFLRSYKAMDKELRSHPNLDCFCSGSTAVTIIKQGSNLFMGNIGDSRAILGSRGSDDSMVAIQLTVDLKPDLPREAERIKQCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRILTNKDQFIVLASDGVWDVLSNEEVVEIVSTAPTRSSAARVLVDKAAQEWKLKYPTSKMDDCAVVCLFLDGKMDSESDYDEQGSSSVILQRDHSGIDTIESDGTQKSEPTLRRNYTVRSSGDDEISEKLPVEVEERVATEDQNWLREWKKTGCDCAVWLSFCVFKLQEKWFIFFIAGMAGPCFEGRDIHESSENIDEKQPEWFFGSDGSNPIPEIGGFPLPFSSGSSGGGSSGGYVPGGDDTLAPNPGCYLGPDPAPTYP 562
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 10759494 10762217 - BLOR06944 Blo15g00550 70950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00550 562 MobiDBLite consensus disorder prediction 141 161 - -
Blo15g00550 562 MobiDBLite consensus disorder prediction 518 562 - -
Blo15g00550 562 CDD PP2Cc 67 371 IPR001932 -
Blo15g00550 562 MobiDBLite consensus disorder prediction 130 161 - -
Blo15g00550 562 Gene3D - 55 373 IPR036457 -
Blo15g00550 562 PANTHER ALPHABET, ISOFORM E-RELATED 1 446 - -
Blo15g00550 562 MobiDBLite consensus disorder prediction 1 21 - -
Blo15g00550 562 ProSiteProfiles PPM-type phosphatase domain profile. 66 371 IPR001932 -
Blo15g00550 562 SUPERFAMILY PP2C-like 63 373 IPR036457 -
Blo15g00550 562 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 446 - -
Blo15g00550 562 Pfam Protein phosphatase 2C 152 349 IPR001932 -
Blo15g00550 562 SMART PP2C_4 55 369 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo13g00379 Blo15g00550 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01476 Blo-Chr1:54038030 Blo15g00550 Blo-Chr15:10759494 2.43E-82 dispersed
Blo15g00550 Blo-Chr15:10759494 Blo17g00516 Blo-Chr17:8221869 1.11E-137 dispersed
Blo13g00379 Blo-Chr13:21862877 Blo15g00550 Blo-Chr15:10759494 2.83E-157 wgd
Blo15g00550 Blo-Chr15:10759494 Blo02g00086 Blo-Chr2:590743 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00550 - - zju:107416642 688.723