Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00571 ATGGAAGTGGTTGAAGTGAAAGGGACGGTGACATCACTGTCTTCGTTATTCCCTGTAGAAGACACACAGAAGGCAGCAAAACGCTTGCACGAGTCGCTTTCTGAGAAGAATCAGGAACTCGAACGTCTTCGAGGTTTCATCTCCGACAACACCAACCTCATCAACCTCGTCCAGAAGCTACCGGAAGAGCTCTACCACGACGTTATGGTACCTTTTGGGAAGGCAGCGTTTTTTCCGGGGCGGTTAATACACACCAATGAGTTTCTGGTTCTTTTAGGAGAAGGTTATCATGCCGAAAGAACATCAAAACAAACTGTGGAGATCTTGAAAAGAAGAGGAAAGTCTTTGGAGTCCCATGTTGATTCTCTTGAGGCAATGATTGAGGATCTGAAAGCTGAGGCTTCCTTTTTCAATGCAACTGCTTCTGAAGCGGTGGAAGGTCTTGTGGACATCAGAGAGGATTATGTGGAGGAAGAGTCCGCTAAGAGAGAATCTGAAATCGTGATCCATCTTGTCTTCTTGGCAGGCAATGAAAAAAATACTGATGATAAAGAGTATGCCCGAATCATGTCTAGGTTGGATGAACTTGAGAGAGAAGAACTTGCAGCTGGAAGTGACTCTGAGAACATTGAAGATGAGGAAAGTGAAGCTTTATTCGACAAATTGTCAGATCAGAAGCTTCTTGATGAAAATCGTAGCTTCTCAAAGATTGACACCTGCGAGTCAAGCAAACCTTCACAGAAAAAAGTGGACTCAAGAGGCAGAGCTGACTGTGTCCAAAATGAGGGCCAATATAAGCAGGATATTATTGACGAGTTTAATGTAAATTCATGTGACTTAGCAAATAGCAAAAGTTTGTTCAAAGTCGATGAGGTTAAGAAGCCAAATAGCGTAGAGAAAAATATTCAACCGCAGTCATCATCAAGCAATGAGATATTTGTTTTCTTCTCGGTTGTTGCTTTAATGGGATTTCTTGGTTCATCTATAGCTTATAAATTCTATGTGGGTGGTAAAGATGGTTGGGTTATGTACCCTTCTGAGGATTACAACCACTGGGCTGAAAGAAACAGGTTCCAAGTCAATGACACCCTCTTTTTCAAGTACAAATATGGGACTGACTCTGTTTTGGTTGTGAAGGAGGAAGATTATTTATCGTGTGACACAAGAAACCCACTTGTTTCTCTTACGGAAGGAGACTCCATTTTCAAGACCGATCGCTCTGGTCCGTTCTTTTTCATCAGTGGATATGCAGAGTGCTGTCATAAGGGTCAGAAGCTTCACATTGTAGTAATGGCGGAGAGGCACAAACATGTTGTTCCTCCTCCTCTTGCGTCGCCTCCTTCGGTACCGTCGCCACAAGCAGAGTTGCCGCCTGCTGAAAGTCCATCTGGTTTTGAAGGTCCGGCAGCTGCGCCGGCAAAGAATTCGGCGTTGCGTAGTAGGAGAGGTTCTGTTGGATTAGTGTTGGGAATTGGAGTCGTCTCTCTGTTTTTATGA 1497 43.89 MEVVEVKGTVTSLSSLFPVEDTQKAAKRLHESLSEKNQELERLRGFISDNTNLINLVQKLPEELYHDVMVPFGKAAFFPGRLIHTNEFLVLLGEGYHAERTSKQTVEILKRRGKSLESHVDSLEAMIEDLKAEASFFNATASEAVEGLVDIREDYVEEESAKRESEIVIHLVFLAGNEKNTDDKEYARIMSRLDELEREELAAGSDSENIEDEESEALFDKLSDQKLLDENRSFSKIDTCESSKPSQKKVDSRGRADCVQNEGQYKQDIIDEFNVNSCDLANSKSLFKVDEVKKPNSVEKNIQPQSSSSNEIFVFFSVVALMGFLGSSIAYKFYVGGKDGWVMYPSEDYNHWAERNRFQVNDTLFFKYKYGTDSVLVVKEEDYLSCDTRNPLVSLTEGDSIFKTDRSGPFFFISGYAECCHKGQKLHIVVMAERHKHVVPPPLASPPSVPSPQAELPPAESPSGFEGPAAAPAKNSALRSRRGSVGLVLGIGVVSLFL 498
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 11715158 11719984 - BLOR06965 Blo15g00571 70971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00571 498 PANTHER RNA POLYMERASE II SUBUNIT 5-MEDIATING PROTEIN NNX3 1 308 - -
Blo15g00571 498 Coils Coil 113 140 - -
Blo15g00571 498 Pfam Plastocyanin-like domain 341 424 IPR003245 GO:0009055
Blo15g00571 498 Coils Coil 19 43 - -
Blo15g00571 498 MobiDBLite consensus disorder prediction 441 457 - -
Blo15g00571 498 Gene3D - 19 148 IPR009053 -
Blo15g00571 498 SUPERFAMILY Prefoldin 20 140 - -
Blo15g00571 498 CDD OsENODL1_like 331 431 IPR041846 -
Blo15g00571 498 ProSiteProfiles Phytocyanin domain profile. 331 432 IPR003245 GO:0009055
Blo15g00571 498 SUPERFAMILY Cupredoxins 330 431 IPR008972 -
Blo15g00571 498 Gene3D - 329 436 IPR008972 -
Blo15g00571 498 PANTHER UNCONVENTIONAL PREFOLDIN RPB5 INTERACTOR 1 1 308 - -
Blo15g00571 498 MobiDBLite consensus disorder prediction 441 473 - -
Blo15g00571 498 Coils Coil 179 213 - -
Blo15g00571 498 CDD Prefoldin_alpha 25 145 - -
Blo15g00571 498 Pfam Prefoldin subunit 30 144 IPR004127 -
Blo15g00571 498 TIGRFAM TIGR00293: prefoldin, alpha subunit 21 144 IPR004127 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00465 Blo-Chr2:6583423 Blo15g00571 Blo-Chr15:11715158 1.40E-20 dispersed
Blo15g00571 Blo-Chr15:11715158 Blo17g00316 Blo-Chr17:3319782 1.41E-23 dispersed
Blo05g00377 Blo-Chr5:4527118 Blo15g00571 Blo-Chr15:11715158 9.66E-06 transposed
Blo06g00704 Blo-Chr6:30133492 Blo15g00571 Blo-Chr15:11715158 6.93E-27 transposed
Blo15g00571 Blo-Chr15:11715158 Blo02g00069 Blo-Chr2:468399 2.18E-84 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00571 K17560 - mnt:21393625 290.426