Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo15g00575 | ATGAGCAGTGTCTGCGACAGCTTTCACCAGTTTCTTCCATCTAAGAAAACCCTTCTGAAGGACATTAATATTCCACCCAGAAAGCTTCTTAACCGCCATGACGGTCCCGACTTCTTCTCTGATTCTCCGCGTTTCTTCTTTTCCAACGATACCCTTTTGCAGAAATTCTTACCCTGTAATAATGGAGACGACGACGGAGACGAAGACGATCCGTACTCCTCCGATTACTTTCGGATCTATGAATTCAAGGTGCGGCGGTGTACTCGGAGCCGGAGCCACGACTGGATGGACTGCCCGTTCGCTCACCCTGGAGAAAAAGCTCGTCGGAGAGATCCTCGCCTGTTTCACTACTCCGGCAAAGTATGCCCGGAATTTCGTCGGGGAGGGTGTAGCCGCGGCGATAGCTGTGAGTTCGCTCACGGGGTTTTCGAGTGCTGGCTTCATCCGACGAGGTACCGAACTGAAGCTTGTAAAGACGGGAAAAACTGTAAAAGAAAAGTTTGTTTCTTTGCCCATTCTCCTCGACAGCTTCGAATTTTTCCCGTAAAGTCGCCGGAATTTCAGATGAACAAGAAGAAGCGTCCGATCTCAGTATCTGGTTCGAACCACTGCTGTATGTTTTGTCATTGCGGAGCATCGTCTTCCCCAACCTCTCCTCTCTTAGGCATGTCTCATCTATCTCCGCCTCATTCGCCGCCACTATCGCCGGCCGAGCCTCAGTCGGTTAATACTTTTACTCCAAATTCGAGAAACAGTGAGGCTAAATTGACCGGAATGGTGCCGACGGAAATGATAAGCTCTCTGGAAGCGATGAGCTTGAACGAAGCGAATAAAACTTCCCCAGCTATACCACCGTCTCCGAGGTTCTCTAGGTCTATGAGTTATTTAAGCAGGAATCTCAATGATGAGAACAGCGTTAAGGGAGAAAATGGCGGATTTATCAATTCTGATCCCGATGTTGGGTGGGTCGATGAGTTATTGATGTAG | 987 | 48.94 | MSSVCDSFHQFLPSKKTLLKDINIPPRKLLNRHDGPDFFSDSPRFFFSNDTLLQKFLPCNNGDDDGDEDDPYSSDYFRIYEFKVRRCTRSRSHDWMDCPFAHPGEKARRRDPRLFHYSGKVCPEFRRGGCSRGDSCEFAHGVFECWLHPTRYRTEACKDGKNCKRKVCFFAHSPRQLRIFPVKSPEFQMNKKKRPISVSGSNHCCMFCHCGASSSPTSPLLGMSHLSPPHSPPLSPAEPQSVNTFTPNSRNSEAKLTGMVPTEMISSLEAMSLNEANKTSPAIPPSPRFSRSMSYLSRNLNDENSVKGENGGFINSDPDVGWVDELLM | 328 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 11906893 | 11907879 | - | BLOR06969 | Blo15g00575 | 70975 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo15g00575 | 328 | MobiDBLite | consensus disorder prediction | 237 | 253 | - | - | |
Blo15g00575 | 328 | PANTHER | UNKEMPT FAMILY MEMBER | 21 | 326 | IPR045234 | - | |
Blo15g00575 | 328 | SUPERFAMILY | CCCH zinc finger | 115 | 145 | IPR036855 | GO:0046872 | |
Blo15g00575 | 328 | MobiDBLite | consensus disorder prediction | 221 | 253 | - | - | |
Blo15g00575 | 328 | PANTHER | ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 2 | 21 | 326 | - | - | |
Blo15g00575 | 328 | Gene3D | - | 116 | 179 | - | - | |
Blo15g00575 | 328 | Pfam | CCCH-type zinc finger | 120 | 141 | IPR041367 | - | |
Blo15g00575 | 328 | SMART | c3hfinal6 | 151 | 174 | IPR000571 | GO:0046872 | |
Blo15g00575 | 328 | SMART | c3hfinal6 | 116 | 142 | IPR000571 | GO:0046872 | |
Blo15g00575 | 328 | ProSiteProfiles | Zinc finger C3H1-type profile. | 117 | 143 | IPR000571 | GO:0046872 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo13g01039 | Blo-Chr13:32736790 | Blo15g00575 | Blo-Chr15:11906893 | 3.74E-50 | dispersed | |
Blo14g00534 | Blo-Chr14:7801614 | Blo15g00575 | Blo-Chr15:11906893 | 5.28E-56 | dispersed | |
Blo15g00575 | Blo-Chr15:11906893 | Blo09g00418 | Blo-Chr9:15146487 | 1.94E-53 | dispersed | |
Blo15g00575 | Blo-Chr15:11906893 | Blo02g00066 | Blo-Chr2:452529 | 4.64E-174 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
13345 | PF00642 | zf-CCCH | 1.10E-06 | CL0537 | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo15g00575 | K23047 | - | jre:108986638 | 359.762 |