Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00605 ATGGGCACTGCCAAGGAAGAGTTTCTCAAGGAGTTCGGTGCTGACTATGGCTACCCTCATGGCCCAAAGTCCATCGATGAGATTCGAACTACTGAATTCAAACGCCTAGATGGTTCTGTATACTTGGATCACGCAGGAGCCACTTTGTATTCCGAGTTGCAAATGGATTCAATCTTCAAAGACCTTACAGCTAATGTTTATGGAAATCCTCATAGCCAAAGTGACTCGAGCACTGCTACTTCTGACATTGTAAAAGAAGCCCGACAACAGGTTCTTGACTATTGCAAAGCATCTCCAAAAGATTACAAATGCATTTTTACCTCTGGTGCAACAGCAGCACTGAAGCTGGTAGGGGAGGCCTTCCCATGGAGTCATCAAAGCAGCTTTATGTACACAACGGAAAATCACAACAGTGTCCTTGGGATCAGAGAATATGCTCTTAATCAAGGGGCTCAAGCCTTTGCTGTAGATATTGAAGATGAGGATCTTGGAGCATCTAAAGGCCCATTTGCGCCATTAAGCATATCAGGGCACCAAATACAAAAGAGAAATGAAGCCAAAATCCTACAGAAGAAGCCTCCAGGGCATGCATACAACCTATTTGCCTTCCCCTCAGAGTGCAATTTTTCAGGTTTAAAATTCAGCCTTGAATTAGTGAAGGTAGTAAAGGGATATTCTGGGAGCATGTTTGATGATCCTCCATTTTGCAATGGTCATTGGATGGTCTTGGTTGATGGTGCAAAAGGTTGTGCCACAAAACCACCGGATTTATCGAAGTATCCTGCGGATTTTGTTGTTGTTTCTTTCTATAAGCTATTTGGATATCCAACTGGACTTGGAGCTCTCATTGTTCACAAGGAGCATGACAGCTACTCTTCTTGTACTTATTTCAATACTGAAGGAACTGTTGCTGCTTCAATTTCTGACATTGACTATGTTAAAAGAAGAGAAGGCATTGAAGAACTTTTTGAAGATGGGACCACTTCTTTTTTGAGCATAGCATCTATACGCTATGGGTTTAAAGTTCTGAATACCCTTACTCCACGTGCAATATTTCGGCACACAACATCACTCACTAGGTTTGTAAGAAAATCGCTCTTGGCCATGAGGCATGAAAATGGAAGCAGCGTATGTGTTCTTTATGGAAGTTGTATTCCAAAGGTATTTTGTAATGAATTAGGACCTATCGTCTCATTCAATTTGAAACGATCTGATGGCTCTTGGTTTGGACACCGTGAAGTGGAAAAACTGGCTTCTCTGTCAGCAATTCAGTTACGGACAGGATGCTTTTGTAATCCTGGTGCATGTGCAAAATATCTTGGTTTATCCCATTCTGATCTTCTTTCAAATATAGAGGCTGGCCATGTTTGCTGGGATGATTATGATGTAATTCATGGCAAACCGACTGGTGCTGTCAGAGTATCCTTTGGCTACATGTCTACTTATGAAGATGCCATGGTAAATATTATTTATGTAGTCATTTTGGTTTTTGCTGGATGTAGAATTTTTTTTTCCTTTTCCAGTTTCTCCAAACATTCAAGAGTGATCAACTCTATAAATTTGATAAACAGATTTCCTCATTTGAAAATGAGGGTTCAAACAAATAAATATATTTGCTCTTTTCTGGGTTGA 1632 40.5 MGTAKEEFLKEFGADYGYPHGPKSIDEIRTTEFKRLDGSVYLDHAGATLYSELQMDSIFKDLTANVYGNPHSQSDSSTATSDIVKEARQQVLDYCKASPKDYKCIFTSGATAALKLVGEAFPWSHQSSFMYTTENHNSVLGIREYALNQGAQAFAVDIEDEDLGASKGPFAPLSISGHQIQKRNEAKILQKKPPGHAYNLFAFPSECNFSGLKFSLELVKVVKGYSGSMFDDPPFCNGHWMVLVDGAKGCATKPPDLSKYPADFVVVSFYKLFGYPTGLGALIVHKEHDSYSSCTYFNTEGTVAASISDIDYVKRREGIEELFEDGTTSFLSIASIRYGFKVLNTLTPRAIFRHTTSLTRFVRKSLLAMRHENGSSVCVLYGSCIPKVFCNELGPIVSFNLKRSDGSWFGHREVEKLASLSAIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDYDVIHGKPTGAVRVSFGYMSTYEDAMVNIIYVVILVFAGCRIFFSFSSFSKHSRVINSINLINRFPHLKMRVQTNKYICSFLG 543
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 14640929 14655203 - BLOR06999 Blo15g00605 71005

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00605 543 SUPERFAMILY PLP-dependent transferases 32 485 IPR015424 -
Blo15g00605 543 Gene3D - 40 340 IPR015421 GO:0003824
Blo15g00605 543 PANTHER MOLYBDENUM COFACTOR SULFURASE 20 495 - -
Blo15g00605 543 Gene3D Aspartate Aminotransferase, domain 1 341 493 IPR015422 GO:0003824
Blo15g00605 543 Pfam Aminotransferase class-V 240 484 IPR000192 -
Blo15g00605 543 Pfam Aminotransferase class-V 40 159 IPR000192 -
Blo15g00605 543 PANTHER MOLYBDOPTERIN COFACTOR SULFURASE MOSC 20 495 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00605 K15631 ABA3; molybdenum cofactor sulfurtransferase [EC:2.8.1.9] - jre:108998007 745.347
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo15g00605 Blo-Chr15:14640929 Blo04g01026 Blo-Chr4:13723847 1.23E-15 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g1040 . . . . . . . . . . . . . . . . . . . . . . . . Cla02g01813 Cam02g1918 Cec02g1939 Cco02g1983 Clacu02g1900 Cmu02g1847 Cre02g2162 . . . . . . . . Blo15g00605 . . . . . . Bma12g00598 Sed14g1679 . . . . . . . . Bhi10g00965 Tan05g0609 Cmetu11g0122 . . . . . . . . . . . . Csa06g01170 Chy11g01023 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005491 1 7 1 1 1 1 1 1 1 2 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 4 1 1 39
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo15g00605 Blo_Chr15 FPKM 344.854401 402.06955 325.97229 348.257477 141.149918 102.401825 159.607239 30.143137 38.176655 41.065815