Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00606 ATGGCTCGGGTACGGCGTGCGACTCCGGGCTCGATGTGCTGCTGGCGGCATTTGGCGAATGGTAACAAACGGCGTGACGAACGGCGAACGTGCTGGCTAGGGCACAACACAGGTTCATTCGGTCCGTTTGAAATCGCGATTTGGACTGCAATTTCCAACCAAGGTAAGCGTCTCTACTGGTTTATGCATATCATTTGGTATTCTGATCTCTTGGATGGATTGTTTGAATTCGGTGCTGCGAGGATTGCAATTTCCAGCGTGGAGTTTGGTCATTGGACCACCTCCCTCGAATTGGGTGATCTTTCCATCAGCTTGGCGTCACTTGTATTCCTCTTCCCTGTCTATAAATCTGGCAGTGAGATTGGAGTTGAGGGCCGAAGAGAAGGAAAGATGACAGTGAGGTATGAACGAGAAAAGAATAGAGTGTTAAACACGCCACGAATTGCAGGTATCATACAAGAAAATAGAAGAACAGGTCAAAGACAGTTGATGAGGGATTTGCACGGGTGGATCTTGTGGCTAGCTGGGCTAAAGAGTTTAAATGACTTTGTTGACTATGAGCTTGTTCCCAAGGTTCATGCTGGCAAGAAGAGCAACCGTTGTCCAGTTGAGGTTTTCTCTTGGATGACGAGGGAAATGAAGGAGAGTACTGGAAGAAAACAAGGTGCACTATCACCATGTGCAGCATGTAAGCTTCTTCGAAGGAGATGCGCTCAGGATTGTGTGTTTGCTCCTTATTTTCCTGCTGATGAGCCAAAAAAGTTTGCCAGCGTGCATAAGGTTTTTGGTGCCAGCAACGTCAACAAGATGTTGCAGGAACTGCCTGAGCATCAGAGGAGTGATGCAGTGAGTTCAATGGTTTACGAAGCCAACGCTCGGGTACGGGATCCGGTTTATGGATGCGTGGGGGCGATATCGTCCCTGCAGCACCAAATCGACATCCTCCAAACCCAACTGGCAATTGCTCAAGCCGAAGTGGTGCAGATGAGGATTGGAGTGGGGCAACACCCTTCGACCAACTACAACAACATAACATCCAACAACGTCTCTCAGCAGCACAACTTACTTTTATGCAGACCAAGTCCTTCTTTTGTGTGGACATGA 1104 48.28 MARVRRATPGSMCCWRHLANGNKRRDERRTCWLGHNTGSFGPFEIAIWTAISNQGKRLYWFMHIIWYSDLLDGLFEFGAARIAISSVEFGHWTTSLELGDLSISLASLVFLFPVYKSGSEIGVEGRREGKMTVRYEREKNRVLNTPRIAGIIQENRRTGQRQLMRDLHGWILWLAGLKSLNDFVDYELVPKVHAGKKSNRCPVEVFSWMTREMKESTGRKQGALSPCAACKLLRRRCAQDCVFAPYFPADEPKKFASVHKVFGASNVNKMLQELPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQHQIDILQTQLAIAQAEVVQMRIGVGQHPSTNYNNITSNNVSQQHNLLLCRPSPSFVWT 367
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 14709666 14718934 + BLOR07000 Blo15g00606 71006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00606 367 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 214 352 - -
Blo15g00606 367 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 214 352 - -
Blo15g00606 367 Pfam Lateral organ boundaries (LOB) domain 226 323 IPR004883 -
Blo15g00606 367 ProSiteProfiles LOB domain profile. 225 326 IPR004883 -
Blo15g00606 367 Coils Coil 305 325 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo09g00352 Blo-Chr9:14137338 Blo15g00606 Blo-Chr15:14709666 1.05E-37 dispersed
Blo11g00187 Blo-Chr11:1483719 Blo15g00606 Blo-Chr15:14709666 4.89E-69 dispersed
Blo13g00804 Blo-Chr13:30805934 Blo15g00606 Blo-Chr15:14709666 1.51E-55 dispersed
Blo15g00606 Blo-Chr15:14709666 Blo16g00219 Blo-Chr16:4932956 1.54E-44 dispersed
Blo15g00606 Blo-Chr15:14709666 Blo04g00218 Blo-Chr4:1690897 8.60E-56 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13347 PF03195 LOB 6.90E-43 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00606 - - mnt:21399316 235.728