Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00613 ATGGCATCTGCGTCTTTGAATAAGATTGAACGTGCTCACCAGATGTATAGAGAAGGCTATTACGATGAAGCTCTCCGATTTTATACAGAAGCCCTTGCCATGACTAAGACCAAGACCCAAAACATTGCCCTCCACAGCAATAGAGCTGCTTGTTATTTGAAACTTCACGATTTCAAGAAGGCTGCAGAAGAATGTACTTCAGTGCTCGAGCTCGATCATAAGCACACAGGAGCTTTAATGCTTAGAGCTCAGACTCTTGTTACCCTCAAGGAATATCAATCTGCACTTTTTGATGTGAACAGGCTTATGGAGTTGAATCCATCATCTGAAGTGTATCAAAATCTTCAAACCCGTTTGAAGACTCAATTGTCACTTGCTCCAATACCTGAATCTGAAGCAGAATTCGAAGGAGAAGAAGATGATGATACACATCTAAACACTTGTGAGGCAGACAAGGAGCAATCTGAAGTAAAAGCTGAGCTTCATATTAGCACCACTGATGCTGAATCTGTTGCCCCTACAAGACAGAGCAATGGATTGTTAGAAAAAGTGGTGGTTCAAAATGTCTCGTCCAAAATCACTACTATAAGTAATGGGCATGCAGCGCCAACACAGAGTGTGCAGGGTTCACTGGAGCGAGATCCCAATGGATGGTGTGCAATTCCGAAGCCAAAAGGGCACTCCACCTTAGATTATGGTCGGTGGGACAGGGTTGATGATGATTCTAGCGAAGAAGATGATGATGATGAAGAAGAGGATTCTCAACCTCAGTATCGCTTTCGTGTTAGAACAGTTGTAGATGAAATGCCTGGTCTGTATGAAGTTATTCTTTCGGCAGCTGAGAACACACGGGGAAGAAACGCAAACTTGGATGCTTCTAAGATACATATGGCTAGTTTTCTTCCTGGTGATTCAACCCTTCATGGAATGTATGAAGGTGGTTCTTCTTCTCAGGACAAGTCAGAAGATGGTGCTCGATGGTACTTTTCCCGGAAGGAAATTGAAGAAAGTTCGCCATCTAAACAAGATGGGATTGACTTGAAAAAGGAGAGTTATCTACGCAAGTCATATTGTACCTTTTTGCAAGATTTGGGAATGAGGCTTAAATTCTTGTTATGCAGACCTCAGGTAACAATTGCTACGGCTATAATTTTCTGCCACCGGTTTTTTCTTCGACAATCCCTTGCAAAGAACGATAGAAGGACCATTGCGACCATATGCATGTTTCTTGCTGGGAAAGTAGAAGAAACTCCGCGTCCTCTGAAAGATGTTATCCTTGTTTCATATGAGATTATACACAAAAAGGATGCAGCCGCAGTTCAAAAGATCAAGCAAAAGGAGGTGTATGAACAGCAAAAGGAATTAATCTTACTTGGAGAGAGACTTGTTCTTGCAACTCTTGGTTTTGATCTTAACGTGCACCATCCCTACAAGCCCCTCGTTGAGGCAATTAAAAAATTCAAAGTTGCTCAAAATGCCCTTGCACAAGTAGCATGGAATTTTGTCAATGATGGATTGAGGACATCTCTTTGCTTGCAATTTAAACCCCACCACATTGCTGCTGGTGCCATTTTCCTTGCTGCTAAGTTCCTTAAAGTAAAGCTCCCGTCAGATGGGGAGAAGGTGTGGTGGCAAGAGTTTGATGTCACCCCACGTCAGTTGGAGGAAGTTAGCAACCAGATGTTGGAACTGTATGAACAGAATCGAGTGCCACCTTCGAGTGAAGTTGATGGAAGTGCAATTGATGGATCTACTAATCGAATCTCTACTAAAGTTCCCATTAGCAGTGAAGAACACCTGCCAACACAAAATCATTCACAGGCTGGAGGTACTTGCTCCAGATCTGCAACTTCGAAGCCTGGATCGTCAAGGCCGGCATCTGAACAATCATGTAAAGATCTTCATAGTGAGCCTCAGCGACCCAACCGAAGTCAAAGTAGTGAAAACGGGAGTATGGAGATGAAACATTATGTGAACCTCAAAGAAGACAGTGATTCTAAACTAAATCCATATCATGAATCAGAGCCCTTGCCTTCTCAAGACATCATAGGTAAAGGTCAGAATTTGTCGAAGTTTCGGTCAGAGAGATTGGACGAACAAAATCAAGAAATCAGTTTGAGAACTAATGAAGCAAGAGAAGTAGTGGACTTCAAGGATAAACATGCAAGCCGAGGAGTGGAGGATAAAGATGGTGCAGTTCGTTGGTCGCCTCGGGAGGTAATAAAAAAGATTGATAAGGACAAGGTAAAGGCCGCATTGGAGAAACGAAGGAAGACCCTTGGTGGTGTCACTCGGAAAACAGAATCAATGGATGAAGATGATCTCATCGAGAGGGAGCTTGAAGCTGGCATCGAACTGGCTGCTGAAAGCGAGAAAAATAAGCGAGAGGTAAGGCAAGGTTGGGCTAAGTTGTCAAATAGACCAGAATATGAGGATTTGCATCAAGAAAGTGATAGAGACGAACGTGGCCAAGGAATGATAGGACAATCAAATTATGGACCAGATTTAAATAACATGGAAGAAGGGGAGTTATCAATAACTAATGATCCTGGCCTGGAATATCAGTCCCCAAAGTCAGGGAGCCGCAAACGAAAGGCTGGGAGCCCACCCGATAAAGTGTTTGAGGGGAAGCAGTGGCAAGATTCATTGGCTGCTTCTCACCGAGATAAGCATTCTGATTATATGGGAGATGGAAACAGTGTAGGTCGGGTTCGCCACGTCGACAGGGATCACAAGCGGCATGTTCAAGAAAATCATCTGAGTGGGAGTGATCTGATCTGGGAAGACACAATAAGAAAAGAACTGAACATTGATCTCAGTCCATTCCAGCCCACTTACCGATTTCATCTTCTTCGCCTACCGTCTGTCTCTGGTTCTGGAGTTGCCGAGAGGAAGGGGGTTTTCTCTTTCCAGATCGAGGGAGAAAAGGGTAGATCAGCCATGTCGCCCGGCAGCTTCAGGAGTGGTAGTCCGGATTTTAATTTACCCGACCAGATCTTGGCGGTGATTCCTACGGATCCTTACGACCAGCTCGATCTTGCCCGTAAGATCACGTCGATGGCGATTGCCTCTCGCGTATCCAAGCTCGAAGGTGAAATGCTTACCATGAAGCAGAGTCTATATGACAAGGACAGGGCTATATTTGACCTCCAGGAGAAGGTGTCTCACCTCGAACATGCCAACCAAGATGCTGAATCACGATTGAAGATCGCACTCGATGAGAATATGAGACTTTCCAGGGAAAGGGAATCATTAGCCATGACTGCGAAGAAACTTGGACGCGATTTGACAAAGTTGGAGACGTTTAAGAGGCAACTAATGCTGTCATTGAATGATGAAAATTCCTCCAATACTGAGACTGTTGATATTGGGACCTGCGATCAAGCTGCTCTCAAAGCATGTCCCGATAAGGCAACGAGGTATACTGGACAAGGATTTTCAATAACACCTTATATCACCCCAAGGCTGACACCAACTGGAACTCCAAAAGGTTTTTCTACTAGTGGTTCCCCTAGAGGGTATTATGCTGTGGCTTCTCCTCATATTACATCTGGTGCTACATCTCCAACAAAGATCTCCAATGAAGGACGGAATGTACTGTCTTCTTGGTATCCTTCAAGCCAGCAGTCATCTGCAGCAAGCTCGCCTACTCGTGGGCGTCCAATGACAGGGCGCACTGCTCGAGTTGATGGAAAGGAATTTTTTCGTCTAGCCAGGACCCGCCTGTCATATGAACAGTTCAGAGCATTCCTAGCTAATATCAAGGAACTAAATGCTCAAAAGCAAACTCGTGAGGAAACTTTGAGAAAGGCAGAAGAGATTTTTGGGACAGATAACAAAGATCTATTTCTATCATTTCAAGGGTTAATGGGGTTGTTTGGTGCTGCTCTGAATGTTCTGTCTGGGGCTCTCTTTGTTAAAAGAACGATCACAGTTTTGAGAAAAATAAGTTTTGGTTTGCCTAGGCTGCACTGCTCCATCAGTATTGCAGTGCTTTTGTAA 4002 44.2 MASASLNKIERAHQMYREGYYDEALRFYTEALAMTKTKTQNIALHSNRAACYLKLHDFKKAAEECTSVLELDHKHTGALMLRAQTLVTLKEYQSALFDVNRLMELNPSSEVYQNLQTRLKTQLSLAPIPESEAEFEGEEDDDTHLNTCEADKEQSEVKAELHISTTDAESVAPTRQSNGLLEKVVVQNVSSKITTISNGHAAPTQSVQGSLERDPNGWCAIPKPKGHSTLDYGRWDRVDDDSSEEDDDDEEEDSQPQYRFRVRTVVDEMPGLYEVILSAAENTRGRNANLDASKIHMASFLPGDSTLHGMYEGGSSSQDKSEDGARWYFSRKEIEESSPSKQDGIDLKKESYLRKSYCTFLQDLGMRLKFLLCRPQVTIATAIIFCHRFFLRQSLAKNDRRTIATICMFLAGKVEETPRPLKDVILVSYEIIHKKDAAAVQKIKQKEVYEQQKELILLGERLVLATLGFDLNVHHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQNRVPPSSEVDGSAIDGSTNRISTKVPISSEEHLPTQNHSQAGGTCSRSATSKPGSSRPASEQSCKDLHSEPQRPNRSQSSENGSMEMKHYVNLKEDSDSKLNPYHESEPLPSQDIIGKGQNLSKFRSERLDEQNQEISLRTNEAREVVDFKDKHASRGVEDKDGAVRWSPREVIKKIDKDKVKAALEKRRKTLGGVTRKTESMDEDDLIERELEAGIELAAESEKNKREVRQGWAKLSNRPEYEDLHQESDRDERGQGMIGQSNYGPDLNNMEEGELSITNDPGLEYQSPKSGSRKRKAGSPPDKVFEGKQWQDSLAASHRDKHSDYMGDGNSVGRVRHVDRDHKRHVQENHLSGSDLIWEDTIRKELNIDLSPFQPTYRFHLLRLPSVSGSGVAERKGVFSFQIEGEKGRSAMSPGSFRSGSPDFNLPDQILAVIPTDPYDQLDLARKITSMAIASRVSKLEGEMLTMKQSLYDKDRAIFDLQEKVSHLEHANQDAESRLKIALDENMRLSRERESLAMTAKKLGRDLTKLETFKRQLMLSLNDENSSNTETVDIGTCDQAALKACPDKATRYTGQGFSITPYITPRLTPTGTPKGFSTSGSPRGYYAVASPHITSGATSPTKISNEGRNVLSSWYPSSQQSSAASSPTRGRPMTGRTARVDGKEFFRLARTRLSYEQFRAFLANIKELNAQKQTREETLRKAEEIFGTDNKDLFLSFQGLMGLFGAALNVLSGALFVKRTITVLRKISFGLPRLHCSISIAVLL 1333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 14986763 15005054 - BLOR07007 Blo15g00613 71013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00613 1333 MobiDBLite consensus disorder prediction 786 823 - -
Blo15g00613 1333 MobiDBLite consensus disorder prediction 1204 1226 - -
Blo15g00613 1333 MobiDBLite consensus disorder prediction 1204 1221 - -
Blo15g00613 1333 Gene3D - 317 471 - -
Blo15g00613 1333 CDD CYCLIN 472 533 IPR013763 -
Blo15g00613 1333 CDD CYCLIN 353 428 IPR013763 -
Blo15g00613 1333 PANTHER - 298 825 - -
Blo15g00613 1333 MobiDBLite consensus disorder prediction 830 855 - -
Blo15g00613 1333 Gene3D - 473 576 - -
Blo15g00613 1333 PANTHER CYCLIN 298 825 IPR043198 GO:0006357|GO:0016538
Blo15g00613 1333 MobiDBLite consensus disorder prediction 664 685 - -
Blo15g00613 1333 MobiDBLite consensus disorder prediction 196 257 - -
Blo15g00613 1333 Coils Coil 1254 1274 - -
Blo15g00613 1333 SMART cyclin_7 478 563 IPR013763 -
Blo15g00613 1333 SMART cyclin_7 359 465 IPR013763 -
Blo15g00613 1333 MobiDBLite consensus disorder prediction 566 629 - -
Blo15g00613 1333 SUPERFAMILY TPR-like 10 120 IPR011990 GO:0005515
Blo15g00613 1333 MobiDBLite consensus disorder prediction 196 212 - -
Blo15g00613 1333 MobiDBLite consensus disorder prediction 786 901 - -
Blo15g00613 1333 Gene3D Tetratricopeptide repeat domain 4 131 IPR011990 GO:0005515
Blo15g00613 1333 SUPERFAMILY Cyclin-like 323 473 IPR036915 -
Blo15g00613 1333 Pfam Cyclin, N-terminal domain 328 472 IPR006671 -
Blo15g00613 1333 Coils Coil 1047 1081 - -
Blo15g00613 1333 SMART tpr_5 42 75 IPR019734 GO:0005515
Blo15g00613 1333 SMART tpr_5 76 109 IPR019734 GO:0005515
Blo15g00613 1333 MobiDBLite consensus disorder prediction 566 651 - -
Blo15g00613 1333 MobiDBLite consensus disorder prediction 882 901 - -
Blo15g00613 1333 SUPERFAMILY Cyclin-like 474 570 IPR036915 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g01215 Blo-Chr2:44122160 Blo15g00613 Blo-Chr15:14986763 7.17E-25 dispersed
Blo08g00237 Blo-Chr8:2935492 Blo15g00613 Blo-Chr15:14986763 0 dispersed
Blo10g00342 Blo-Chr10:5128501 Blo15g00613 Blo-Chr15:14986763 7.57E-37 dispersed
Blo12g00321 Blo-Chr12:18671811 Blo15g00613 Blo-Chr15:14986763 1.08E-59 dispersed
Blo15g00613 Blo-Chr15:14986763 Blo05g00412 Blo-Chr5:5234278 5.16E-08 dispersed
Blo15g00613 Blo-Chr15:14986763 Blo14g00615 Blo-Chr14:11110791 1.29E-08 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00613 K15188 - vvi:100265067 797.734