Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00626 ATGAATTCAGCGTGTAAGAGGCGAAGGACCGGGCTTGGTTCATCGAATCTATTTCTGCAGATTTCGTCCGTCGCTTTCCCTCTTTCTGACCAGATCTTTGTCAAAACCCTCAACGGTAAGACCATAACGCTCGAGGTTGAGAGCAGTGATAGCATCGACAATGTCAAGGCAAAGATTCAGGATAAGGAAGGTATTTCTCCTGATCAACAAAGATTGATATTTGCTGGTAAGCAGCTGGAAGATGGTCGAACACTGGCAGATTATAACATTCAAAAGGAGTCTACACTTCATTTGGTGTTGAGGCTCAGGGGAGGGACTATGATTAAGGTCAAGACTCTCACAGGGAAGGAAATTGAGATTGATATTGAGCCAACTGACACAATTGAACGCATCAAGGAGCGCGTTGAGGAGAAAGAGGGAATTCCTCCTGTGCAGCAAAGGCTTATATATGCGGGTAAACAGCTTGGAGATGACAAAACGGCCAAGGACTATAACATTGAAGTGGATCGTGTTAAAAGATATAACTTTGGAGATGTAACTCATTTGCTTCCTCCCTTCACACATCTATCAACAGATGGTGCTTATGCTGCTGTTCAATATATTGACATTATGACTTGTTATGAAGATGATAATATTGAAATAAGGGCATCAGATCTTGCTGAAGAGAAATCTAATGAAGAGGCTATTTCTCAACGTGAAAGTTCAACTTTCCAAGTGAATTCTGAGATAGGAGAAATAACAACTGAGTTATGTGATACACCATTCGGGTTGTCAAAAAAAGAACCTTCAGTGTTGATTAGACTTCGAAGGGAGATTGAAGAATGGGATGCAACCATCTCTAATTCCAAGAGGTACATGTTATTAAACACACTCATTGATTATTCTTCTAAAATTAGCTGGATTAAAAATTTTGGTCATTTTGACTTTGTTATACTGTTGCGGATTGGAAATTTCATTTATGCTGTTGTTTGTGAGCCCTCTTCACATATTGAAATGTCAAATGAGGTTGTTGACCTTTGCATGCTTAGTGGTACAACTATAGAGACACTAGTGACTAAAGAGCACCATGGTATTGAGCTTGATTTTCCAGTCGTTAAGAAAAGAGATTATCATAATTGGGATAAATGTCTAAATTTTGAGATTAATGATGCTTGCTTGATTTGTGAAAGAGTTGTTGTTGATTTGATGATGGAAGACATGTTGATGGGCAATCTTGATGTTTTGTTTGAGAACTATTGTGACCCTATTTTTCTACCCCCGCATGATTGTGTTCTTGCAAGTTATACATCCACTCCCATTGAGCACGCCCACCAAGAAAGGTAA 1323 39.23 MNSACKRRRTGLGSSNLFLQISSVAFPLSDQIFVKTLNGKTITLEVESSDSIDNVKAKIQDKEGISPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIERIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEVDRVKRYNFGDVTHLLPPFTHLSTDGAYAAVQYIDIMTCYEDDNIEIRASDLAEEKSNEEAISQRESSTFQVNSEIGEITTELCDTPFGLSKKEPSVLIRLRREIEEWDATISNSKRYMLLNTLIDYSSKISWIKNFGHFDFVILLRIGNFIYAVVCEPSSHIEMSNEVVDLCMLSGTTIETLVTKEHHGIELDFPVVKKRDYHNWDKCLNFEINDACLICERVVVDLMMEDMLMGNLDVLFENYCDPIFLPPHDCVLASYTSTPIEHAHQER 440
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 15774894 15782330 + BLOR07020 Blo15g00626 71026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00626 440 PANTHER UBIQUITIN 31 174 - -
Blo15g00626 440 SUPERFAMILY Ubiquitin-like 31 105 IPR029071 -
Blo15g00626 440 Gene3D - 29 105 - -
Blo15g00626 440 PANTHER BNAA08G07930D PROTEIN 31 174 - -
Blo15g00626 440 PRINTS Ubiquitin signature 40 60 IPR019956 -
Blo15g00626 440 PRINTS Ubiquitin signature 61 81 IPR019956 -
Blo15g00626 440 PRINTS Ubiquitin signature 82 103 IPR019956 -
Blo15g00626 440 ProSiteProfiles Ubiquitin domain profile. 30 105 IPR000626 GO:0005515
Blo15g00626 440 CDD Ubl_ubiquitin 31 105 - -
Blo15g00626 440 CDD Ubl_NEDD8 108 167 IPR038738 -
Blo15g00626 440 ProSitePatterns Ubiquitin domain signature. 132 157 IPR019954 -
Blo15g00626 440 Pfam Ubiquitin family 32 103 IPR000626 GO:0005515
Blo15g00626 440 Pfam Ubiquitin family 108 167 IPR000626 GO:0005515
Blo15g00626 440 SUPERFAMILY Ubiquitin-like 108 167 IPR029071 -
Blo15g00626 440 SMART ubq_7 106 173 IPR000626 GO:0005515
Blo15g00626 440 SMART ubq_7 30 101 IPR000626 GO:0005515
Blo15g00626 440 Gene3D - 106 182 - -
Blo15g00626 440 ProSiteProfiles Ubiquitin domain profile. 106 167 IPR000626 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01438 Blo-Chr3:40965481 Blo15g00626 Blo-Chr15:15774894 3.55E-41 dispersed
Blo10g00807 Blo-Chr10:25482066 Blo15g00626 Blo-Chr15:15774894 2.63E-39 dispersed
Blo11g00920 Blo-Chr11:19324130 Blo15g00626 Blo-Chr15:15774894 1.46E-17 dispersed
Blo15g00626 Blo-Chr15:15774894 Blo16g00412 Blo-Chr16:15775116 8.41E-145 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00626 K12158 - sspl:121782547 245.743