Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00627 ATGGGGAAGGGAAGAGCACCATGCTGTGATAAGAGTCAAGTGAAGAGGGGTCCCTGGAGTCCAGCCGAGGATTTGAGGCTCATTACTTTCATTCAGAAGCACGGCCATGAAAACTGGCGAGCTCTCCCTAAACAAGCAGGGTTACTGAGATGTGGGAAGAGTTGCCGGTTGAGATGGATCAACTACCTCCGCCCAGACGTGAAGCGAGGGAATTTCAGCAAGGAGGAAGAGGAAGCCATTCTTCACTTGCATCAAGCTCTGGGCAACAAGTGGTCCAAAATAGCTTCGCATTTCCCTGGAAGAACAGACAATGAGATTAAGAATGTGTGGAACACTCACTTAAAGAAGAGACTTTCTGCCAACCACATCTCCTCCCCTACTGCTACTTCATCCAATGAAGATTCGAAACATGAATCTCATCAAGATTTGAGCTCTCCCCCTGAAAATGGCGACGGATCAAAGCAGTCGTTGATCACTTCTTCTGCATCTTCCACCTCTTCTTCATCTTCTAATTCTTCTTACGATTCAAACAACATCCCCACCTCCAGCCAACATCATACTTCCATGGAATATTATATACTGTCCGAGTTAGAGACTGGTGTCAACAATGGAGGTCTGAGTGGAGTGGGATTAGAGTCAGACAGTGACTTCTGGGACATGTTTGGAATCGAAAAGACAAATTCTTCGTTTGACTCAAATGCAGTGGAAGCAGAAGCAGTAGCAGCAACAGCGGAAGAAGAAACCGACGTCAAGTGGTTGCGTTACATTAAAAATGAGCTCGGACTGGTTGGAGACGTGGCGCCGGTGACAAGAGACGACGGGATTGTAGAGGACGACACATTTGAGTTGGATGTACTATGGCCATTGCTGTGA 873 47.08 MGKGRAPCCDKSQVKRGPWSPAEDLRLITFIQKHGHENWRALPKQAGLLRCGKSCRLRWINYLRPDVKRGNFSKEEEEAILHLHQALGNKWSKIASHFPGRTDNEIKNVWNTHLKKRLSANHISSPTATSSNEDSKHESHQDLSSPPENGDGSKQSLITSSASSTSSSSSNSSYDSNNIPTSSQHHTSMEYYILSELETGVNNGGLSGVGLESDSDFWDMFGIEKTNSSFDSNAVEAEAVAATAEEETDVKWLRYIKNELGLVGDVAPVTRDDGIVEDDTFELDVLWPLL 290
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 16019786 16021336 + BLOR07021 Blo15g00627 71027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00627 290 Gene3D - 70 144 - -
Blo15g00627 290 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Blo15g00627 290 Pfam Myb-like DNA-binding domain 69 114 IPR001005 -
Blo15g00627 290 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Blo15g00627 290 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 198 - -
Blo15g00627 290 MobiDBLite consensus disorder prediction 120 183 - -
Blo15g00627 290 PANTHER TRANSCRIPTION FACTOR MYB72 1 198 - -
Blo15g00627 290 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
Blo15g00627 290 SMART sant 15 65 IPR001005 -
Blo15g00627 290 SMART sant 68 116 IPR001005 -
Blo15g00627 290 SUPERFAMILY Homeodomain-like 14 110 IPR009057 -
Blo15g00627 290 CDD SANT 71 114 IPR001005 -
Blo15g00627 290 Gene3D - 16 68 - -
Blo15g00627 290 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Blo15g00627 290 CDD SANT 18 63 IPR001005 -
Blo15g00627 290 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Blo15g00627 290 MobiDBLite consensus disorder prediction 145 183 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00091 Blo-Chr1:1263477 Blo15g00627 Blo-Chr15:16019786 2.47E-61 dispersed
Blo15g00627 Blo-Chr15:16019786 Blo14g00357 Blo-Chr14:3908097 1.37E-61 dispersed
Blo15g00627 Blo-Chr15:16019786 Blo07g00264 Blo-Chr7:3182324 1.27E-63 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13348 PF00249 Myb_DNA-binding 7.30E-14 CL0123 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00627 K09422 - vvi:100246160 265.388