Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00633 ATGGAAGACGAAAACCCTAACCCTCAGAATATCGCCGTTGAGCTCTACTCCAACATTGCTTCCACTTCCACCTCGCCGAGGATGTTGTGGTTCGCGGTCAACTTGCCAAAGCATCGGTTGAGGGATGAGGGCTGTTTAGGAGGACACTACTGCGGTGCAAGAAGTGCAAGCTGCTGCGATACAGACCCTATAGCGCCGGCACAGTGTCAAGACTTCTCTTTTCTTGTTCCTCTCGAGCTTTTGCTGGCGTCAATGGCTTCCGCAACTTCGACCACAACACTCTCTTTCCTCCCCACCACCAAATCATCGTCAAACTCCACAACTCGCTCTTCCCTTCTCCAAGTCTCACCCACATCGTCTTCGTCATCCATTCCCCTCCGCACCTCTTGCATTCAGTGCCTCGGTTTCACCGCCGTCGACCCACAGTTCTCTCTCCATGTTGCTTCAAAAGTTCGATTGTTTAGGGGCAAAGCATCAAGGGCCGTGGCATCCATGGCCAAGAAGAGCGTCGGTGATTTGACTACTGCAGACTTGAAAGGGAAGAGGGTGTTTGTGAGGGCAGACTTGAATGTTCCTTTAGATGACGCCCAGAATATTACCGACGATACTAGGATCAGGGCTGCCATTCCCACCATCAAATATCTCATTCAAAATGGAGCTAAAGTTCTTCTTTCCAGCCATTTGGGAAGACCAAAAGGTGTAACTCCCAAATACAGTTTGGCACCTCTTGTACCTAGACTCTCAGAACTGCTCGGCATTCAGGTTGTGATGGCCATCGACTGTATTGGTGCAGAGGTTGAAAAGTCTGTGACTTCGCTTCCTGAAGGTGGTGTTCTTCTGCTCGAAAATGTCCGATTTTACAAGGAAGAAGAGAAGAACGACCCTGAGTTTGCGAAAAAGCTTGCATCCACGGCAGATCTCTATGTAAACGACGCATTTGGTACTGCTCATAGAGCTCATGCTTCGACTGAAGGTGTCACAAAATTCCTTAAGCCATCAGTGGCTGGTTTTCTCTTACAAAAGGAACTTGATTACCTTGTTGGGGCAGTGTCAAGCCCTAAAAGGCCATTTGCAGCCATTGTGGGTGGTTCAAAGGTCTCATCGAAGATCGGTGTGATCGAGTCACTTCTGGAGAAGTGTGACATTCTACTTCTTGGTGGGGGAATGATCTTTACATTTTACAAGGCACAGGGTCTCTCTGTGGGCGCATCTTTGGTAGAGGAGGATAAGCTAGATCTTGCCACATCCCTCCTTGCAAAGGCTAAGGCCAGAGGAGTGTCTCTTCTGTTACCAACTGATGTTGTCATTGCCGACAAGTTTGCTCCTGATGCAAACAGCAAGATTGTCCCAGCTAGTGCAATCCCCGACGGTTGGATGGGATTGGATATTGGACCGGATTCTATCAAGACATTCAACAGCGCTTTGGAAACAACAAAAACCATAATCTGGAATGGACCAATGGGAGTGTTTGAGTTCAACAAGTTTGCAGCTGGAACAGAGGCTGTAGCTAAGAAACTAGCTGAACTGAGTGGGAAGGGAGTGACGACCATTATTGGAGGCGGAGATTCAGTGGCAGCTGTGGAGAAGGTGGGAGTTGCAGGCGTGATGAGCCACATCTCGACAGGCGGCGGTGCAAGCTTGGAATTGTTGGAAGGCAAAGAGCTTCCTGGCGTACTTGCTCTAGAGGAAGCGACCCCTGTGGCTGTGTGA 1710 49.3 MEDENPNPQNIAVELYSNIASTSTSPRMLWFAVNLPKHRLRDEGCLGGHYCGARSASCCDTDPIAPAQCQDFSFLVPLELLLASMASATSTTTLSFLPTTKSSSNSTTRSSLLQVSPTSSSSSIPLRTSCIQCLGFTAVDPQFSLHVASKVRLFRGKASRAVASMAKKSVGDLTTADLKGKRVFVRADLNVPLDDAQNITDDTRIRAAIPTIKYLIQNGAKVLLSSHLGRPKGVTPKYSLAPLVPRLSELLGIQVVMAIDCIGAEVEKSVTSLPEGGVLLLENVRFYKEEEKNDPEFAKKLASTADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGLSVGASLVEEDKLDLATSLLAKAKARGVSLLLPTDVVIADKFAPDANSKIVPASAIPDGWMGLDIGPDSIKTFNSALETTKTIIWNGPMGVFEFNKFAAGTEAVAKKLAELSGKGVTTIIGGGDSVAAVEKVGVAGVMSHISTGGGASLELLEGKELPGVLALEEATPVAV 569
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 16594365 16598857 - BLOR07027 Blo15g00633 71033

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00633 569 PRINTS Phosphoglycerate kinase family signature 335 357 IPR001576 GO:0004618|GO:0006096
Blo15g00633 569 PRINTS Phosphoglycerate kinase family signature 516 527 IPR001576 GO:0004618|GO:0006096
Blo15g00633 569 PRINTS Phosphoglycerate kinase family signature 177 193 IPR001576 GO:0004618|GO:0006096
Blo15g00633 569 PRINTS Phosphoglycerate kinase family signature 304 326 IPR001576 GO:0004618|GO:0006096
Blo15g00633 569 PRINTS Phosphoglycerate kinase family signature 358 377 IPR001576 GO:0004618|GO:0006096
Blo15g00633 569 PRINTS Phosphoglycerate kinase family signature 539 556 IPR001576 GO:0004618|GO:0006096
Blo15g00633 569 PRINTS Phosphoglycerate kinase family signature 199 221 IPR001576 GO:0004618|GO:0006096
Blo15g00633 569 PRINTS Phosphoglycerate kinase family signature 276 291 IPR001576 GO:0004618|GO:0006096
Blo15g00633 569 PRINTS Phosphoglycerate kinase family signature 480 505 IPR001576 GO:0004618|GO:0006096
Blo15g00633 569 PANTHER PHOSPHOGLYCERATE KINASE 59 564 IPR001576 GO:0004618|GO:0006096
Blo15g00633 569 SUPERFAMILY Phosphoglycerate kinase 172 563 IPR036043 GO:0004618|GO:0006096
Blo15g00633 569 CDD Phosphoglycerate_kinase 173 563 IPR001576 GO:0004618|GO:0006096
Blo15g00633 569 MobiDBLite consensus disorder prediction 97 124 - -
Blo15g00633 569 PANTHER PHOSPHOGLYCERATE KINASE 59 564 - -
Blo15g00633 569 Pfam Phosphoglycerate kinase 175 553 IPR001576 GO:0004618|GO:0006096
Blo15g00633 569 Hamap Phosphoglycerate kinase [pgk]. 172 563 IPR001576 GO:0004618|GO:0006096
Blo15g00633 569 ProSitePatterns Phosphoglycerate kinase signature. 182 192 IPR015911 GO:0004618|GO:0006096
Blo15g00633 569 Gene3D - 171 347 IPR015824 GO:0004618|GO:0006096
Blo15g00633 569 Gene3D - 350 563 IPR015824 GO:0004618|GO:0006096
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00633 K00927 PGK, pgk; phosphoglycerate kinase [EC:2.7.2.3] - csv:101215670 776.163
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo04g00465 Blo15g00633 CCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g01395 Blo-Chr7:34019098 Blo15g00633 Blo-Chr15:16594365 6.61E-51 dispersed
Blo13g00599 Blo-Chr13:28414040 Blo15g00633 Blo-Chr15:16594365 1.13E-39 dispersed
Blo15g00633 Blo-Chr15:16594365 Blo17g00597 Blo-Chr17:11659808 5.56E-20 dispersed
Blo15g00633 Blo-Chr15:16594365 Blo04g00465 Blo-Chr4:3858254 0 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g1132 Blo04g00465 . . . Bpe07g00471 . . . . . . . . . Sed04g3516 . . Bhi05g01998 Tan02g0042 Cmetu01g1031 Lac12g0043 Hepe02g0016 . . . . . . . . . . . . . . . . . Blo15g00633 . . . . . Bma03g00497 . . . . . . . . . . . . . . . . . . . . . . . . . . Chy01g00859 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001509 2 3 3 3 3 2 4 2 2 2 2 2 3 2 2 4 2 4 4 1 2 2 2 2 2 1 2 3 2 2 72
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo15g00633 Blo_Chr15 FPKM 0.0 0.53597 0.761929 0.504795 0.216046 0.26935 0.306804 0.0 0.0 0.0