Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00635 ATGGTTACTGATAGGAAGGAGAGAACAGGTGTTGATCGGTTTTCACTCAGACAAGCTGTAATCTTCATCTGTGCAACCAATAGGCCAGATGAGTTGGACTTTGAATTTGTCCGTGCTGGACGTATTGACCGTCGATTGTACATAGGTTTACCTGATGCCAAGCAAAGGGAGGAAATTTTTGCCGTGCACAGCTCAGGAAAGCTACTCGGAGAGGATGTGCATTTTGGAAAGCTTGTTTTTCGAACAGTTGGTTTTTCTGGAGCAGATATTCAAAATCTTGTTAATGAGGCAGCGATAATGTCGGTAAGAAAAGGACATTCGAAAATTTACCAACAAGACATTGTTGATGTGTTAGATAAACAATTACTTGAGGGTATGGGTGTACTTCTCACTGAGGAAGAGCAACAGAAGTGTGAAGAAAGAGTGTCTTTTGATAAGAGGAAACTTCTGGCTGTACATGAAGCTGGTCACATACTATTAGCTCATCTGTTTCCTTGTTTTGACTGGCATGCATTTTCTCAGCTTCTGCCTGGAGGCAAGGAAACAGCAATATCAGTATTCTATCCTCGAGAAGATATGGTTGACCAAGGATATACTACCTTTGGTTATATGAAAATGCAAATGGTAGTTGCACATGGTGGTCGTTGTGCAGAGCGTATTGTGTTTGGGGATGACATTACTGATGGAGGAAGTGATGACCTAGAGAAAATAACAAAGATTGCTAGGGAGATGGTCATTAGTTCTCAAAATCGGAGACTGGGACTTACTGCATTAACCAAGAAGATTGGATTGATGGATCGACCAGATAATCCCGACGGAGAATTGATAAGATATAGGTGGGATGATCCGAATGTGATTCCTGCCAATATGACGATTGAAGTGTCTGAGCTATTTTCTCGAGAGTTGACTAGGTACATTGAAGAGACAGAAGAATTGGCTATAAATGGTTTGAGGGCCAACAGGCATATACTAGATATGCTTACAGAAGAATTGTTGGAAAAGTCTAGGATTACTGGATTGGAAGTTGAAGAGAAAATGAAGAGACGGAGTCCAATTATGTTTGAGGATTTTGTTAAGCCATTCCAGATAAATTTAGAACAGACACAGCAAATTTCACGGCCTCTTATGGCTAGAGACTGCGAGAAATTGCAGTCCCTAGAGCTATTCGTAGTCCCTGGTTTCTTCAACTCCCTCTCGACCACTTCCTCATTTCCATTGGGTAGAAATTTTCCAGGACGTCATCCAAGACCTGCATATCAATAA 1263 41.33 MVTDRKERTGVDRFSLRQAVIFICATNRPDELDFEFVRAGRIDRRLYIGLPDAKQREEIFAVHSSGKLLGEDVHFGKLVFRTVGFSGADIQNLVNEAAIMSVRKGHSKIYQQDIVDVLDKQLLEGMGVLLTEEEQQKCEERVSFDKRKLLAVHEAGHILLAHLFPCFDWHAFSQLLPGGKETAISVFYPREDMVDQGYTTFGYMKMQMVVAHGGRCAERIVFGDDITDGGSDDLEKITKIAREMVISSQNRRLGLTALTKKIGLMDRPDNPDGELIRYRWDDPNVIPANMTIEVSELFSRELTRYIEETEELAINGLRANRHILDMLTEELLEKSRITGLEVEEKMKRRSPIMFEDFVKPFQINLEQTQQISRPLMARDCEKLQSLELFVVPGFFNSLSTTSSFPLGRNFPGRHPRPAYQ 420
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 16670171 16684389 + BLOR07029 Blo15g00635 71035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00635 420 Gene3D - 52 123 - -
Blo15g00635 420 SUPERFAMILY FtsH protease domain-like 145 356 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Blo15g00635 420 Pfam ATPase family associated with various cellular activities (AAA) 11 49 IPR003959 GO:0005524|GO:0016887
Blo15g00635 420 Pfam Peptidase family M41 143 343 IPR000642 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Blo15g00635 420 PANTHER ATP-DEPENDENT PROTEASE 10 370 - -
Blo15g00635 420 PANTHER ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 12, CHLOROPLASTIC 10 370 - -
Blo15g00635 420 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 124 IPR027417 -
Blo15g00635 420 Pfam AAA+ lid domain 72 114 IPR041569 -
Blo15g00635 420 Gene3D - 6 51 IPR027417 -
Blo15g00635 420 Gene3D Peptidase M41 135 351 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo15g00635 Blo-Chr15:16670171 Blo17g00712 Blo-Chr17:20497564 5.52E-52 dispersed
Blo15g00635 Blo-Chr15:16670171 Blo04g00702 Blo-Chr4:6440244 9.87E-45 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00635 K03798 - vvi:100244978 650.973