Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00647 ATGTCGATCCTGTGGGAGAAGAGCGGAGGATGGAGGTGGATAGTGAGGAAGACCAGGGACTCCAAGCCTTTCTTCTTGGCTTTCGCTACCCTATGCGGCGTCATTCCAGGGATGATCGGTTACTGTGTGATGCAGGTCACCAACTCTCGAAATGATCAACTCGAAGCCCACCTCCGCCAGAATGCTCGACCTGAATCCCTCATGATGGCCAGAGTAAATCAAGAAAGACTTGCAGAATATTTGGGTGAGCTGCATAGGAAAGAGGACACGAATGATCGATATATCGCAGCTCTAAGAGGAGAGACACTGACAAGGAAGCCATATGTTAGAATTCAAGCAATGGCAAATCAAAGTAATAAGGAGGAGGGCGATAAAGAGCAGGGCAAAAAAGAA 393 48.09 MSILWEKSGGWRWIVRKTRDSKPFFLAFATLCGVIPGMIGYCVMQVTNSRNDQLEAHLRQNARPESLMMARVNQERLAEYLGELHRKEDTNDRYIAALRGETLTRKPYVRIQAMANQSNKEEGDKEQGKKE 131
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 17755180 17756543 + BLOR07041 Blo15g00647 71047

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00647 131 PANTHER OS02G0495900 PROTEIN 1 126 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00647 - - - cmos:111451237 212.616
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo15g00647 Blo-Chr15:17755180 Blo18g00529 Blo-Chr18:7042145 1.59E-93 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g1178 . . . . Bpe07g00479 . . . . . . . . . . . . . . . . . . . Cla02g01838 Cam02g1945 Cec02g1972 Cco02g2011 Clacu02g1925 Cmu02g1874 Cre02g2187 . . . . . . . Cme11g01653 Blo15g00647 . . . . . . Bma12g00563 Sed05g3318 . . . . . . . Cpe05g01025 Bhi10g00923 Tan05g0574 Cmetu11g0931 . Hepe08g0657 . . . . . . . . . . Csa06g01142 Chy11g01050 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010488 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo15g00647 Blo_Chr15 FPKM 9.482402 12.009193 0.0 0.0 0.187866 0.234217 0.722632 0.237236 0.329258 0.396019