Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00649 ATGGATCAACTTCTACAACCCGAAGCTTTCATTCAAACTGCCCCTATGGCCTCAGTGCCGCCTCTCCCCGAGTTTAACGACCCTTCAAATCCAACTCATCCCAACTCAAGATTTGAGATTTCTTATGAATTTCGTTATCTTTTATTTACGATTTTTTTTTGGGACAAAAGCCAAAAGCTTGAGGGAGAGCTGAAGGACACAGCAGCTGCAAGGAAAATTCAGAAGGCAGGCAGAGAAAAATTGAGGAGGGATAAACTAAATGAGCAGTTTATTGAGCTTGGACATGTCTTAGATCCTGATAGGCCTAAAAATGACAAAGCAACCATTCTTATGGATACCATCCAATTGCTGAAGGATCTGACATCTCAAGTTAATAAACTGAAAGCTGAATACACTACACTGACTGAAGAATCACATGAGTTGACTCAAGAGAAAAATGATCTTAGAGAAGAGAAGGCATCTCTTAGATCTGATATTGAGAATCTTAGTGCACAGTATCAGCAGAGAATGAGTATGTTTCCTTGGCAGGCTATGGACCCCTCCGTCGTCATGGCTTCTCCCTCATATCCTTTTCCAGTAGCGATGCCAATGCCGATGCCTCCTGGGTCGATTCCGATGCATCCATCAATGCAGCCTTACTCCATCTTTGGGAATCAAAATCCCTGTTCGACATTTGTCCCTTACATACCTTCTAATGCCTTGGTTGAACATCAGCCCATACCTCCACTTGTCCATCCAGGCAGCCAGTCTCGCAACTCTGGCAAACAAGATTCCAAGGGGGAAAGCAGGATTGAGAGAAGTCAAGGATCTAATGACGTTACCACGGATCTTGCGTTGAAGACTCCAGGATCTACAGCCGAGCAGGGTTCATCGTTGGGACAAAGAAAATGCAAGCAAACTCTGAGCCAGGAAAACAGTGCTGCAGAATGGAGTTCTTCGAGTAGATGTTCTTCATCTCGTAGTGTACAAGATAGCTCTTCTAACAGCATACCTGACGGTAGACAGGCTAAGGATGAACAAGATAAGAAGACATAA 1035 43.96 MDQLLQPEAFIQTAPMASVPPLPEFNDPSNPTHPNSRFEISYEFRYLLFTIFFWDKSQKLEGELKDTAAARKIQKAGREKLRRDKLNEQFIELGHVLDPDRPKNDKATILMDTIQLLKDLTSQVNKLKAEYTTLTEESHELTQEKNDLREEKASLRSDIENLSAQYQQRMSMFPWQAMDPSVVMASPSYPFPVAMPMPMPPGSIPMHPSMQPYSIFGNQNPCSTFVPYIPSNALVEHQPIPPLVHPGSQSRNSGKQDSKGESRIERSQGSNDVTTDLALKTPGSTAEQGSSLGQRKCKQTLSQENSAAEWSSSSRCSSSRSVQDSSSNSIPDGRQAKDEQDKKT 344
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 18034416 18037088 + BLOR07043 Blo15g00649 71049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00649 344 Gene3D - 68 147 IPR036638 GO:0046983
Blo15g00649 344 CDD bHLH_AtILR3_like 75 149 - -
Blo15g00649 344 PANTHER TRANSCRIPTION FACTOR BHLH121 55 336 IPR044579 GO:0003700|GO:0055072
Blo15g00649 344 Pfam Helix-loop-helix DNA-binding domain 72 120 IPR011598 GO:0046983
Blo15g00649 344 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 69 140 IPR036638 GO:0046983
Blo15g00649 344 MobiDBLite consensus disorder prediction 267 333 - -
Blo15g00649 344 MobiDBLite consensus disorder prediction 239 344 - -
Blo15g00649 344 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 70 120 IPR011598 GO:0046983
Blo15g00649 344 SMART finulus 76 126 IPR011598 GO:0046983
Blo15g00649 344 Coils Coil 110 165 - -
Blo15g00649 344 PANTHER TRANSCRIPTION FACTOR BHLH121 55 336 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00653 Blo-Chr2:16417722 Blo15g00649 Blo-Chr15:18034416 1.26E-93 dispersed
Blo04g00884 Blo-Chr4:10141757 Blo15g00649 Blo-Chr15:18034416 6.42E-59 dispersed
Blo07g00920 Blo-Chr7:28223111 Blo15g00649 Blo-Chr15:18034416 2.47E-19 dispersed
Blo15g00649 Blo-Chr15:18034416 Blo08g00166 Blo-Chr8:1909684 8.07E-12 dispersed
Blo15g00649 Blo-Chr15:18034416 Blo03g01435 Blo-Chr3:40925272 1.07E-22 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13349 PF00010 HLH 4.10E-07 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00649 - - pvy:116118223 354.755