Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00657 ATGACGACGGAGCTCGGGCTCGAAGGACTGCTCGGCGAACGGGGAAGCGTCGGACGGCGACATCCGGCGCTGAGAGCGACGACTGCAACAATGGTTGCGGTGTCTAGGACTCGGAACTCCCGTCGATGCCATGAATCGTCAGGCATTGGAACATCTTCTTTGAAGTGTGTGACCTATCTGTGTGATGCATCTTCTTTGCCTATAGAGGGCAGTGATGCTGGAATGCAAGAAAAAGGGAGGACTTCTACTGCTGCTCTCGGGTGCTTCATGGTATCGTACGAGAAACAGAAGAACAGGTCAAAGACAGTTGATGAAGGATTTGCACGGGTGGATCTTGTGGCTGGTTGGGCTAAAGAATTTAAAAAGGGAGTTGCGAATGTGCAGGCCATTGAGGACGAAGAAAGTGGTCATGTTGGGAACAAAGTTCAGCCTTTATCTTCCACGACGAAGTGGTTAGAAGAATGGAAAGTAGGGGAGGAGAGGAAGAATGATCACACCTGTCTGAGGGAGAACTTAGGATTTGACGAGTTCTTTGCTTTAAAGGTATGGAGGGAATCTTTAGGAGAACTAGTCGGCACAGCAGTGTTCGTGTTCTCCCTCGACGCCATAGTCATCTCTTCTTACCACAGCACAACCAGCTCGCCAAATCTGATAATGTCCTGCCTCATTGCGATCACCGTCGCGATTCTTCTTTTAGCCACTAACCCCATATCCGGCGGCCATCTAAACCCAGCCATCACCTTAGGCGCTGCTTTTCTCGGCATCGTCTCCCTCTCCAGGGCACTCATTTACAGTGTGGCTCAGTGCATTGGAGCCATAATCGGAGCTCTCGCCCTGAAAGCTGTAGTAAGCAGCGCCATAGAAGAGAACTTCTCGCTGGGAGGATGCACTCTCACTGTGATTATACCAGGCCCTAATGGGCCGCTCACAATGGGCCTAGAAAAGGGCCAGGCCCTTTGGCTTGAAATCATCTGCACTTTCGTTCTTCTTTTTGCATCAATTTGGATAGCTTTTGACCATCGGCAGGCCAAGGCGTTGGGTCGAGTCATTGTGTTTCTTATAATTGGCATCGTCGTCGGCCTCCTAGTGTTTGTATCCACTACGCTCACTGACACGAAAGGCTATGCTGGGGTTGGAATGAATCCGGCTCGATGTTTTGGGCCGGCCATTGTTCGTGGGGGCAACCTCTGGAATGACCATTGGATTTTCTGGGCTGGGCCCACTATTGCTTGTGTGGTATTCTACTTCTACCTCAAAATGATTCCACATCAACAATACCAGGCTCAAGGTTATAAGCATGACATCTTTGACATGTTTAAAACTTCATTCAAGTACAAATCTGCTGATAGGAAATAA 1356 49.41 MTTELGLEGLLGERGSVGRRHPALRATTATMVAVSRTRNSRRCHESSGIGTSSLKCVTYLCDASSLPIEGSDAGMQEKGRTSTAALGCFMVSYEKQKNRSKTVDEGFARVDLVAGWAKEFKKGVANVQAIEDEESGHVGNKVQPLSSTTKWLEEWKVGEERKNDHTCLRENLGFDEFFALKVWRESLGELVGTAVFVFSLDAIVISSYHSTTSSPNLIMSCLIAITVAILLLATNPISGGHLNPAITLGAAFLGIVSLSRALIYSVAQCIGAIIGALALKAVVSSAIEENFSLGGCTLTVIIPGPNGPLTMGLEKGQALWLEIICTFVLLFASIWIAFDHRQAKALGRVIVFLIIGIVVGLLVFVSTTLTDTKGYAGVGMNPARCFGPAIVRGGNLWNDHWIFWAGPTIACVVFYFYLKMIPHQQYQAQGYKHDIFDMFKTSFKYKSADRK 451
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 18671074 18681415 + BLOR07051 Blo15g00657 71057

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00657 451 PANTHER AQUAPORIN-LIKE 128 443 - -
Blo15g00657 451 SUPERFAMILY Aquaporin-like 182 421 IPR023271 -
Blo15g00657 451 Gene3D Glycerol uptake facilitator protein. 149 435 IPR023271 -
Blo15g00657 451 PANTHER AQUAPORIN-LIKE 128 443 - -
Blo15g00657 451 Pfam Major intrinsic protein 180 412 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo15g00657 451 PRINTS Major intrinsic protein family signature 223 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo15g00657 451 PRINTS Major intrinsic protein family signature 260 279 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo15g00657 451 PRINTS Major intrinsic protein family signature 184 203 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo15g00657 451 PRINTS Major intrinsic protein family signature 321 339 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo15g00657 451 PRINTS Major intrinsic protein family signature 362 384 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo15g00657 451 PRINTS Major intrinsic protein family signature 401 421 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo15g00657 451 ProSitePatterns MIP family signature. 241 249 IPR022357 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00657 - - K09866 qsu:112008441 426.017
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00723 Blo-Chr1:9196236 Blo15g00657 Blo-Chr15:18671074 1.89E-11 dispersed
Blo15g00657 Blo-Chr15:18671074 Blo04g00573 Blo-Chr4:4927713 1.55E-24 dispersed
Blo15g00657 Blo-Chr15:18671074 Blo13g01118 Blo-Chr13:33303294 3.20E-25 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g88 . Blo15g00657 . . . . . . . . . Cma20g00773 . Car20g00676 . . . . . . . . . . . . . . . . . . Cone8ag1256 . Cone10ag1186 Lsi10g00459 . Chy11g00301 . . . . . . . . . Sed01g0227 . . . . . . . . Bhi10g01899 Tan05g1199 Cmetu11g1981 . Hepe08g0951 . . Cla02g01120 Cam02g1193 Cec02g1182 . Clacu02g1182 Cmu02g1142 . . Csa02g01348 . Cme11g00423
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010832 0 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 4 1 1 1 1 1 1 1 1 1 1 1 2 32
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo15g00657 Blo_Chr15 FPKM 28.254261 32.746357 153.745331 159.097 17.88187 19.182711 16.690882 177.735428 164.307938 156.222641