Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00664 ATGGCGATCGGGAGAGGAGAGATCGGTTGCAAACGAGAGGCCCAATCGGGAGACAGCGATGACGGCGACGTGGGCAAGCTCGGGACGGCGACCTGCAACGCCGTTCAACGTCTGGCGATCTGTTCCGGGGTGGCGCGACGACAGAGAACTCGGCGTTTCGAGCTGCGAACTGACGACTGTGAGTCATCGTGCGCCTCGTCCAGCAATCTCCCGAGCTGGGGTTTCTGCTCGGTTCAAGCACTCCAAGGACCAGCAGCATTGACAACTCCAGATTTGAGGAAGAGGAGGGAGCTGCCATTGACGGGTGCTACAACCGTGTGTTTGTATGATGGATTTGATCTTGTGGCTGGAGGAGCTGGAATGGTTGACCGAACATTGGAGCTATTGTTCTCGGGTCCTCCAGGTTGTGTCCGTGGGTGTGCAGCAGGTATGGGAGCTGCTTATGGTACAGCAAAGAGTGGTGTTGGTGTGGCTTCAATGGGGGTAATGAGGCCCGAGCTGGTTATGAAATCTATTGTTCCAGTGGTTATGGCTGGAGTTTTGGGCATATATGGTTTGATTATTGCTGTGATTATCAGCACTGGGATCAATCCCAAGGCCAAATCGTATTACCTATTTGATGGTTATGCTCATTTGTCATCTGGCCTTGCTTGTGGCCTTGCTGGGCTGTCAGCAGGAATGGCAATTGGTATTGTTGGTGATGCTGGTGTCAGAGCACCCAAGCGCTTTTTAGGCCCAGCTCAGTTCTCTTATCCATCGGTCCAATGCACTAGGCTCATCTCATGGAGGGAAAAGCCAAAATGTAGTTGTAGTCTTGTTGTTCGCCGCCTCGACGCATTCCCTTCTCTCCCCGGCATCGTCCCACACAGAAAGAAAGAGCGCATAGCCCCGGCCCGACCTGTAGGTCCGCTAACGTAA 918 53.59 MAIGRGEIGCKREAQSGDSDDGDVGKLGTATCNAVQRLAICSGVARRQRTRRFELRTDDCESSCASSSNLPSWGFCSVQALQGPAALTTPDLRKRRELPLTGATTVCLYDGFDLVAGGAGMVDRTLELLFSGPPGCVRGCAAGMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRAPKRFLGPAQFSYPSVQCTRLISWREKPKCSCSLVVRRLDAFPSLPGIVPHRKKERIAPARPVGPLT 305
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 19363022 19374396 - BLOR07058 Blo15g00664 71064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00664 305 CDD ATP-synt_Vo_c_ATP6C_rpt2 205 245 - -
Blo15g00664 305 CDD ATP-synt_Vo_c_ATP6C_rpt1 139 196 - -
Blo15g00664 305 SUPERFAMILY F1F0 ATP synthase subunit C 203 240 IPR035921 -
Blo15g00664 305 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 143 240 - -
Blo15g00664 305 TIGRFAM V_ATP_synt_C: V-type ATPase, C subunit 142 237 IPR011555 GO:0033179|GO:0046961|GO:1902600
Blo15g00664 305 PRINTS Vacuolar ATP synthase 16kDa subunit signature 146 170 IPR000245 GO:0033179|GO:0046961|GO:1902600
Blo15g00664 305 PRINTS Vacuolar ATP synthase 16kDa subunit signature 172 196 IPR000245 GO:0033179|GO:0046961|GO:1902600
Blo15g00664 305 PRINTS Vacuolar ATP synthase 16kDa subunit signature 223 249 IPR000245 GO:0033179|GO:0046961|GO:1902600
Blo15g00664 305 PANTHER V-TYPE PROTON ATPASE SUBUNIT C2 143 240 - -
Blo15g00664 305 Pfam ATP synthase subunit C 141 192 IPR002379 GO:0015078|GO:0033177|GO:1902600
Blo15g00664 305 Gene3D - 120 245 IPR035921 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo15g00664 Blo-Chr15:19363022 Blo17g00753 Blo-Chr17:23845470 1.89E-59 dispersed
Blo15g00664 Blo-Chr15:19363022 Blo18g00785 Blo-Chr18:22701057 1.28E-57 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00664 K02155 - csin:114303587 174.096