Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00671 ATGGCGATGAGTTCCGATACTTGGAAGACGGAGAACCCAGAAGCGAGTCGACCAGCTGGGAATCGACTTTATCTTGGGATGGACTTTGGTACATCAGGTGCGAGGTTCGCGCTTATTGACAAGGAAGGCGCAATTCATGCTCAGGGAAAGAAGGAATATCCATTGTTGAAGAGTGATGGGACGATAGATTGGGTGCTATCATGGAAAACAACACTCTTCTCTCTTCTTCAAGACGTCCCCAAGGTTCTTTGTCATCTCATTGCTTCAGTTTCCATAGATGGTACTTCTGCAACTACTATCATTTTAGACAGCAAAACGGGTGAACCATTACAGAGACCATACCTCTATAATGAGAGCTGTCCAGATGCTGTCCCGCATGTGAAGTCAATTGCTCCTCCAAATCATACAGTTTGCTCAGCTTCTTCTACACTGTGCAAGTTGGTCTCATGGTGGAATAAAGTTGACTCAAAAAAAGAATCTGCAATATTGTTGCATCAGGCAGATTGGCTATTATGGCTTCTTCATGGAAAGCTTGGGGTATCAGACTACAATAATGCTCTCAAGGTTGGTTATGATCCTGAAGCTGACTCTTATCCACCTTGGCTTATTTGTCAACCATATTCACAGCTTTTGCCTGTTGTTAAAGCTCCTGGAACTTCAATTGGTTGCTTAAAAGAGGACATTAGATTGGAATATGGTTTCCCATATGATTGTATTGTATCCAGTGGAACCACAGATAGTATTGCAGCTTTTCTTGCAGCACGTGCAACACAACCAGGAAAATCTGTGACTTCTTTGGGTTCAACACTTGCTATTAAACTATTGAGCACCAGGCGGGTTGAAGATGCACGATTTGGTGTGTATAGTCACCGACTCGAAGATAAGTGGTTAGTGGGAGGTGCTTCAAACACTGGTGGAGCTGTTCTAAGAAATTTTTTTACTGATGAGCAGCTGGACAATCTAAGTAAACAGATTAATCCTATGGAAGCATCTCCTCTTGATTACTACCCTCTGCCGTCTATTGGGGAAAGATTTCCTGTGGCTGATCCAAAAATGGCCCCCCGGCTGAGTCCGCGACCAGAGAATGATGTTGAATATCTGCATGGGATCTTAGAATCCATTGCACGAATAGAGGCAAAAGCCTATAACTTACTCAAGGATCTTGGAGCAACCCAAGTTGACGAGGTCTTCACTGCTGGAGGCGGAGCAAAAAATGAGAAATGGACAAAAATACGAGAGAGAGTACTTGGCTTGCCCGTGAGTCCGGCAGTTCAAAGAGAAGCAGCATATGGGGCCGCTTTGCTAGCATTGAAAGCTGCCCTCCCACAGTGA 1332 44.44 MAMSSDTWKTENPEASRPAGNRLYLGMDFGTSGARFALIDKEGAIHAQGKKEYPLLKSDGTIDWVLSWKTTLFSLLQDVPKVLCHLIASVSIDGTSATTIILDSKTGEPLQRPYLYNESCPDAVPHVKSIAPPNHTVCSASSTLCKLVSWWNKVDSKKESAILLHQADWLLWLLHGKLGVSDYNNALKVGYDPEADSYPPWLICQPYSQLLPVVKAPGTSIGCLKEDIRLEYGFPYDCIVSSGTTDSIAAFLAARATQPGKSVTSLGSTLAIKLLSTRRVEDARFGVYSHRLEDKWLVGGASNTGGAVLRNFFTDEQLDNLSKQINPMEASPLDYYPLPSIGERFPVADPKMAPRLSPRPENDVEYLHGILESIARIEAKAYNLLKDLGATQVDEVFTAGGGAKNEKWTKIRERVLGLPVSPAVQREAAYGAALLALKAALPQ 443
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 20228812 20232913 - BLOR07065 Blo15g00671 71071

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00671 443 Pfam FGGY family of carbohydrate kinases, N-terminal domain 23 252 IPR018484 GO:0005975|GO:0016773
Blo15g00671 443 Gene3D - 250 442 - -
Blo15g00671 443 PANTHER D-RIBULOSE KINASE 22 440 - -
Blo15g00671 443 SUPERFAMILY Actin-like ATPase domain 258 440 IPR043129 -
Blo15g00671 443 Gene3D - 20 249 - -
Blo15g00671 443 PANTHER SUGAR KINASE 22 440 - -
Blo15g00671 443 PIRSF GlpK 21 441 IPR000577 GO:0005975|GO:0016301
Blo15g00671 443 Pfam FGGY family of carbohydrate kinases, C-terminal domain 290 439 IPR018485 GO:0005975|GO:0016773
Blo15g00671 443 SUPERFAMILY Actin-like ATPase domain 23 251 IPR043129 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00671 K22935 XK1, psk; D-ribulokinase [EC:2.7.1.47] - rcu:8284350 686.026
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g20 . Blo15g00671 Bda06g00960 . . . . . . . . Cma20g00815 . Car20g00699 . . . . . . . . . . . . . . . . . . . . Cone10ag1101 Lsi10g00411 . Chy11g00341 . . . . . . . . . . . Cmo20g00823 . . . . Cpe16g00271 . Bhi10g01950 . . . Hepe08g0981 . . . . . . . . . . Csa02g01302 . Cme11g00164
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009802 1 4 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 33
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo15g00671 Blo_Chr15 FPKM 0.0 0.0 0.0 0.0 2.549346 1.490075 2.812672 9.491307 10.413539 10.493998