Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00688 ATGGGGAAAGGAGCCGGATGCTTTCCGAGCAAGAACCGGCCACCAATAGGCGTTTCTGTTTCTGAGAGAGATCTTCCTCCCCCAGAAAGAGGGAATCCACTTTCTACCGAAATTCAAATTCCATCAGCCGAAATAACAGCTCCAATTCAAGACGGAAATGGAAAAGGAGTGGTAAGAAAACTGAGGATTTTCATAGTTTTCTATTCTATGTACGGACATGTGGATTTACTGGCGAGGACGATAAAGAAAGGGGTTGATTCAGTTGACGGGGTTGAAGGGGTTTTGTACAGGGTCCCGGAGACACTTGCTCCGGAGATTTTGGAGCAGATGAGGGTTCCCCAGAAGGAAGATCAAGCGCCCGTGATCTCTGTGGAGGAGTTAGTGGAGGCTGATGGGTTTTTGTTTGGATTTCCGACCAGATATGGCTCCATGGCTTCACAGATGAAGGCATTCTTTGATTCCACCTTTCAATTGTGGGAAGATCAGAGGCTGGCCGGTGTGCCTGCTGGATTCTTCGTAGGATCCGGCACTCAGGGTGGCGGCCAGGAGACCACTGCATGGACGGCGATAACTCAGTTGGCCCACCATGGAATGATCTATGTTCCAATTGGGTACACATTCGGAGCAGGAATGTTTGAGATGGACTCCATTAGAGGAGGTTCTCCATATGGGGCCGGAGTTTTTTCCGGCGATGGAACAAGGCCACCGAGTGAAACAGAGCTGGCCCTTGCTCAGCATCAAGGCAGACACATGGCTTCAACTGTAAGGAGATTTGTAAGACCCTAA 786 49.75 MGKGAGCFPSKNRPPIGVSVSERDLPPPERGNPLSTEIQIPSAEITAPIQDGNGKGVVRKLRIFIVFYSMYGHVDLLARTIKKGVDSVDGVEGVLYRVPETLAPEILEQMRVPQKEDQAPVISVEELVEADGFLFGFPTRYGSMASQMKAFFDSTFQLWEDQRLAGVPAGFFVGSGTQGGGQETTAWTAITQLAHHGMIYVPIGYTFGAGMFEMDSIRGGSPYGAGVFSGDGTRPPSETELALAQHQGRHMASTVRRFVRP 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 21317889 21319227 - BLOR07082 Blo15g00688 71088

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00688 261 PANTHER NAD(P)H DEHYDROGENASE (QUINONE) FQR1-LIKE 2-RELATED 5 260 - -
Blo15g00688 261 PANTHER FLAVODOXIN-RELATED PROTEIN WRBA-RELATED 5 260 - -
Blo15g00688 261 SUPERFAMILY Flavoproteins 62 258 IPR029039 -
Blo15g00688 261 MobiDBLite consensus disorder prediction 1 36 - -
Blo15g00688 261 Gene3D - 60 259 IPR029039 -
Blo15g00688 261 ProSiteProfiles Flavodoxin-like domain profile. 63 251 IPR008254 GO:0010181
Blo15g00688 261 TIGRFAM flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 62 254 IPR010089 GO:0003955|GO:0010181
Blo15g00688 261 Pfam NADPH-dependent FMN reductase 76 203 IPR005025 GO:0016491
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00688 K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] - zju:107404573 376.326
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00784 Blo-Chr5:28753526 Blo15g00688 Blo-Chr15:21317889 1.07E-120 dispersed
Blo14g00346 Blo-Chr14:3762940 Blo15g00688 Blo-Chr15:21317889 1.87E-68 dispersed
Blo15g00688 Blo-Chr15:21317889 Blo07g00550 Blo-Chr7:14887921 1.24E-16 dispersed
Blo15g00688 Blo-Chr15:21317889 Blo07g00931 Blo-Chr7:28487874 1.12E-85 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g556 . Blo15g00688 Bda06g00948 . Bpe07g00459 . . Bma12g00546 . . Cma02g00425 . Car02g00281 . . . . . . . . . . . . . . . . . . . . Cone3ag1142 . Lsi10g00335 . Chy11g00416 . . . . . . . . . . Cmo02g00426 . . . . . . Cpe05g01236 . . . . . . . Cla09g01743 Cam09g1834 Cec09g1895 Cco09g1987 . . Cre01g0676 . Csa02g01222 . Cme11g00475
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0012355 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 29
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo15g00688 Blo_Chr15 FPKM 0.010956 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0