Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00703 ATGGTAAGCACTCTCCAAGGGTATGAAGATCTTCTTCTATCTCCACACCACAATCCACACCTTGAAAGGGGAGGTATTGGAGAAGATAGTAACCCTTTCAACTCGGCCAAGAAGCTTCAAGACGGCCAAGCTCGGGCTATGGATGAATCGGCGTTGAGGGAGGGGGATGCCGCGGAGCAATCATTTTTCCCTTCTCCAAACATTTTCTCGGAAAATCATTTTGGTATCCATCCAATTACTTCGTCCTTCTTCAAAGGCACTTTCATATTGCTTCGCAGGCGGGTCGTAAAACATCACTGGAAAATGAATGATCTAATGACCAAATCATTTCTGAGCTATGTAGAACTTAAGAAACAAACAATGAAGGATTTGGAAGCTGGGCCAGACATCGAGATGGGGAAAATTGACCCTGCAGATGAACAAAATCTCTCGCACTTTTTTGAAGAAGTTGGTGCGATCAAAGCAAGCATGGAAGAGATCACTAATCTTCTCTTCGACCTTCAAAACCTGAACGAAGAGACGAAATCCATTTATAATGCCAATGTTCTTAGTGGAGTCAGAGAAAAAATCAACTTAGACATGGTCGAGGTTCTTCGAAAGGCAAAAAATATCAAAACGAAGCTTGGATTTCTTGATCAATCCAATATCGCCAATCGAAAAGTATCAAAATCATACAAAGAAGGAAGCCCAGTTGATAGAACGAGAATTTCTGTCACGAATGGGCTGAGAATTAAACTGAAAGATATGATGAATGATTTTCAAGCATTGAGAGAGCAGATTCTGAAGGATCACAAAGAGGGTCTGAAGAGGAGGTATTTTGCTGCAACTGGAGAAGAAGCTAGCGAGGAAGCCATTGAAAGAATGATTTCAGAAGGTGGGAAAGAGAAGATCTTTGAAGGGAAAAAAGACTTGTTAATAGAGAATGAGGAGAGAGAAGAGGGTTTGAAGGAGATACAGAGGAGCTTGAAGGAGCTTCATCAGGTTTTTCTGGATATGGCTGTTCTGGTGGAAACTCAAGGAGAGCATATGAATAATGTTGAGCAGAATATGAGTTGGGCTGGAGCTCATATCCAGGATGGAACAAAGGAGCTGTTGGATGCCAAGAAATTGAAGAGCAGAGCTCAATGGACTTACTGGATTGTAGCTCTGGTTTTAATTCTGCTGTTCATTTGCCTTATTTCTACCTTGGTTTTCTGA 1197 41.69 MVSTLQGYEDLLLSPHHNPHLERGGIGEDSNPFNSAKKLQDGQARAMDESALREGDAAEQSFFPSPNIFSENHFGIHPITSSFFKGTFILLRRRVVKHHWKMNDLMTKSFLSYVELKKQTMKDLEAGPDIEMGKIDPADEQNLSHFFEEVGAIKASMEEITNLLFDLQNLNEETKSIYNANVLSGVREKINLDMVEVLRKAKNIKTKLGFLDQSNIANRKVSKSYKEGSPVDRTRISVTNGLRIKLKDMMNDFQALREQILKDHKEGLKRRYFAATGEEASEEAIERMISEGGKEKIFEGKKDLLIENEEREEGLKEIQRSLKELHQVFLDMAVLVETQGEHMNNVEQNMSWAGAHIQDGTKELLDAKKLKSRAQWTYWIVALVLILLFICLISTLVF 398
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 22339372 22342430 - BLOR07097 Blo15g00703 71103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00703 398 SUPERFAMILY t-snare proteins 142 360 IPR010989 GO:0016020|GO:0016192
Blo15g00703 398 MobiDBLite consensus disorder prediction 19 50 - -
Blo15g00703 398 Gene3D - 138 268 - -
Blo15g00703 398 SMART SynN_4 138 265 IPR006011 GO:0016020
Blo15g00703 398 CDD SynN 143 299 IPR006011 GO:0016020
Blo15g00703 398 Pfam Syntaxin 146 340 IPR006011 GO:0016020
Blo15g00703 398 PANTHER SYNTAXIN 106 394 IPR045242 -
Blo15g00703 398 PANTHER SYNTAXIN-112 106 394 - -
Blo15g00703 398 ProSitePatterns Syntaxin / epimorphin family signature. 311 350 IPR006012 GO:0005484|GO:0006886|GO:0016020
Blo15g00703 398 Coils Coil 153 173 - -
Blo15g00703 398 CDD SNARE_syntaxin1-like 309 364 - -
Blo15g00703 398 Gene3D - 299 397 - -
Blo15g00703 398 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 305 367 IPR000727 -
Blo15g00703 398 SMART tSNARE_6 300 367 IPR000727 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00722 Blo-Chr1:9192879 Blo15g00703 Blo-Chr15:22339372 0 dispersed
Blo15g00503 Blo-Chr15:8565426 Blo15g00703 Blo-Chr15:22339372 4.37E-46 dispersed
Blo15g00703 Blo-Chr15:22339372 Blo16g00051 Blo-Chr16:1903083 6.66E-95 dispersed
Blo18g00562 Blo-Chr18:7935770 Blo15g00703 Blo-Chr15:22339372 9.93E-11 dispersed
Blo15g00703 Blo-Chr15:22339372 Blo04g00912 Blo-Chr4:10701857 4.69E-113 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00703 K08486 - csin:114258522 419.468