Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00710 ATGGCTTCCCTTCAGCAGTTATCCGCCGTAAAGGGCGCCAAAGTGCTCATGGTTGGAGCAGGTGGAATCGGCTGCGAGCTCCTCAAGACTCTAGCTCTCTCTGGCTTTGAAGACATTCATATTATTGACGTGGATACCATAGAAGTCAGCAACCTCAACAGACAATTTTTATTCCGTAAATCTCATGTTGGACAATCGAAGGCCAAAGTTGCTCGAGATGCAATTTTAAGATTTAGACCTCTCATCAACATTACTGCATATCATGCAAATGTCAAGAGCCAGGACTTCAATGTGGATTTCTTTAAGCAATTTAGTGTTGTCTTGAATGGGCTTGACAATGTAGATGCAAGACGGCATGTTAATCGTCTGTGTTTGGCAGCTGATGTTCCTCTTGTTGAAAGTGGGACTACTGGTTTCCTTGGACAGCAGGTAACCGTTCATGTCAAGGGAAGGACAGAGTGCTATGAATGCCAGCCAAAACCTGCCCCCAAAACATACCCTGTGTGTACAATTACTAGTACTCCTTCTAAGGTCTGTGGTTTTAATTTTGTGCACTGTATTGTTTGGGCAAAAGAACTTCTTTTTGCAAAGTTGTTTGGTGACAAGAATCAAGAAAACGATTTGAATGTACGAGCTAATGATACTGCTAGCTCGTCAGATCAGGCTGATGATGTATTTGAACACAGAAAGAATGAGGACATTGAGCAATATGGAAGAAGGATATATGATCATGTTTTTGGTTATAACATTGAAGTAGCTTTATCTAATGAAGAGACATGGAAAAATCATAATAGACCAAGGCCAATTTATTCTAGAGATGTCCTCTTGAATGAACCGGCTCAACAGAACGGAAATGTGGACAGAGAAAGTTCGACTCCTGATTTATCATTAGTGTCCGCCATGACATCTTTGGGAATGAAAAACCCTCAGGACATGTGGAGTCTTATTGAAAACTCAAAAATCTTTATTGAGGCTCTTAAACTATTTTTCACAAAGAGGGAGAAGGACATTGGAAACATGACTTTTGACAAAGATGATCAGCTAGCCGTGGAATTTGTCACTGCTGCTGCAAATATCAGGGCTGCTTCCTTTGGTATTCCACTGCATAGCCTTTTTGAAGCCAAAGGTATTGCTGGTAATATTGTGCATGCAGTTGCAACAACAAACGCTATTATTGCTGGATTGATTGTGATTGAAGCAATCAAGGTGCTGCAAAATGATACAAAGAATTACAGAATGACCTACTGCCTTGAACATCCATCAAGAAAGATGCTAATCATGCCAGTGGAACCATTTGAACCAAACAAATCTTGCTATGTTTGTTCTGAGACACCTCTCTCTCTTGAGGTTAATACTCAACTGACAAAGTTGAGGGATTTGGTTGAAAAGATTGTCAAGTCCAAGCTGGGGATGAACTTTCCACTAATCATGCATGGTCCTTCCCTTCTGTACGAAGTTGGTGATGATCTCGATGTCGACATGGTGGCAAATTATGCCTCTAACCTTGATAAGGTGTTATCTATGCTGCCTTCTCCAGTTACTAGTGGGACAATACTGACAGTCGAAGATCTCCAACAAGAGCTCACTTGTAATATCAATATTAAGCACAGAGAGGAATTTGATGAGGAGAAGGAACCTGATGGAATGCTTCTATCTGGATGGGTTCAAGCATCTGCAGTGGCTAAGAATGAAGACAAGACCGTTGTTAATGGCGAAAGCACGTTAAATCCATTTGCAACAACTGTGAAGCCAGGCAAGATGGACGGGTTGGAAGTTTCTGCAGGGAAGAAAAGAAAATTATGCGAGGAATCCGAGTCTGTCAGCTCGATAGCAGAAACCAAGAACTCTACTAAACTCGAAGTTCTGGACGATGAAGAGGACCTTATAATGCTTGACGATGGTGCTACGCCCACAATCAAGAAGAAAAAGTTACATTAA 1938 41.38 MASLQQLSAVKGAKVLMVGAGGIGCELLKTLALSGFEDIHIIDVDTIEVSNLNRQFLFRKSHVGQSKAKVARDAILRFRPLINITAYHANVKSQDFNVDFFKQFSVVLNGLDNVDARRHVNRLCLAADVPLVESGTTGFLGQQVTVHVKGRTECYECQPKPAPKTYPVCTITSTPSKVCGFNFVHCIVWAKELLFAKLFGDKNQENDLNVRANDTASSSDQADDVFEHRKNEDIEQYGRRIYDHVFGYNIEVALSNEETWKNHNRPRPIYSRDVLLNEPAQQNGNVDRESSTPDLSLVSAMTSLGMKNPQDMWSLIENSKIFIEALKLFFTKREKDIGNMTFDKDDQLAVEFVTAAANIRAASFGIPLHSLFEAKGIAGNIVHAVATTNAIIAGLIVIEAIKVLQNDTKNYRMTYCLEHPSRKMLIMPVEPFEPNKSCYVCSETPLSLEVNTQLTKLRDLVEKIVKSKLGMNFPLIMHGPSLLYEVGDDLDVDMVANYASNLDKVLSMLPSPVTSGTILTVEDLQQELTCNINIKHREEFDEEKEPDGMLLSGWVQASAVAKNEDKTVVNGESTLNPFATTVKPGKMDGLEVSAGKKRKLCEESESVSSIAETKNSTKLEVLDDEEDLIMLDDGATPTIKKKKLH 645
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 22998955 23003653 - BLOR07104 Blo15g00710 71110

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00710 645 PIRSF SUMO_E1B 2 644 IPR030661 GO:0016925|GO:0019948
Blo15g00710 645 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 3 562 IPR045886 -
Blo15g00710 645 CDD Uba2_SUMO 14 441 - -
Blo15g00710 645 Pfam ThiF family 6 439 IPR000594 -
Blo15g00710 645 Gene3D - 333 382 IPR042063 -
Blo15g00710 645 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 8 493 IPR035985 GO:0008641
Blo15g00710 645 Pfam Ubiquitin/SUMO-activating enzyme ubiquitin-like domain 448 540 IPR028077 -
Blo15g00710 645 PANTHER SUMO-ACTIVATING ENZYME SUBUNIT 3 562 - -
Blo15g00710 645 Gene3D - 383 416 - -
Blo15g00710 645 Gene3D - 2 215 - -
Blo15g00710 645 Pfam Ubiquitin-activating enzyme, SCCH domain 322 375 IPR019572 -
Blo15g00710 645 Gene3D - 442 632 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00710 K10685 UBLE1B, SAE2, UBA2; ubiquitin-like 1-activating enzyme E1 B [EC:6.2.1.45] - jre:108986970 1005.74
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo02g00838 Blo15g00710 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00701 Blo-Chr2:21431643 Blo15g00710 Blo-Chr15:22998955 1.26E-07 dispersed
Blo10g00844 Blo-Chr10:26900812 Blo15g00710 Blo-Chr15:22998955 7.66E-17 dispersed
Blo15g00710 Blo-Chr15:22998955 Blo02g00158 Blo-Chr2:1391635 1.23E-06 dispersed
Blo16g00267 Blo-Chr16:6296597 Blo15g00710 Blo-Chr15:22998955 5.58E-12 transposed
Blo16g00608 Blo-Chr16:24609099 Blo15g00710 Blo-Chr15:22998955 7.86E-06 transposed
Blo15g00710 Blo-Chr15:22998955 Blo02g00812 Blo-Chr2:28502196 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g336 Blo02g00838 Blo15g00710 . Bda08g00946 Bpe07g00415 . Bma05g00435 Bma12g00496 . . Cma02g00376 Cma20g00825 Car02g00243 Car20g00711 . . . . . . . . . . . . . . . . . . . . . Lsi10g00399 . Chy11g00352 . . . . . . . . . Sed01g0281 Cmo02g00383 Cmo20g00836 . . . . Cpe16g00263 Cpe05g01278 Bhi10g01969 Tan05g1264 Cmetu11g1045 . Hepe08g0992 . . . . . . . . . . Csa02g01289 . Cme11g00143
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004157 1 1 2 4 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 4 3 1 44
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo15g00710 Blo_Chr15 FPKM 1.207876 1.461791 0.0 0.0 0.0 0.0 0.0 0.094148 0.022949 0.048357