Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00712 ATGGATTTGCTGTCTCTAAGGGAGCATCATGCCCGAACACTACTTATTCATTATCGTTGGGATGTGGAGAATTTGTTTGCTGTCCTTGTTGAGAAAGGAAAATCCTCCTTATTTGCCGCTGCTGGTGTTCGCGTGTCTGAGCATCCAAATCTTGATGCATCAGCCTCTGCTTCTGCTCTGACCTGTGATGTCTGCATGGAGGAATTAGACAGTAAGAAAGCAACAGTGATGGATTGTGGCCATTGCTTCTGCAACGACTGTTGGACAGAGCATTTTATCGTTAAAATAAATGAAGGTCAAAGTCGGCGCATCAGGTGTATGTCATACAAGTGCAATGCTATCTGTGATGAATCTGCTGTTAGAAACCTAGTAAGTCAGAGGCACCCTGACCTTGCAGATAAATTTGATCGCTTTCTTCTTGAGTCTTATATTGAGGATAATAAAAAAGTTAAGTGGTGCCCAAGTACTCCTAATTGTGGTAATGCAATAAGAGTAGAGGATGATGAATTCTGCGAGGTAGAATGTTCGTGTGGTTTACAGTTTTGTTTTAGCTGCTTATCAGAAGCACATTCACCATGTTCGTGTTTGATGTGGGAGCTGTGGATAAAGAAATGTCGTGATGAATCTGAAACAGTTAATTGGATTACTGTTCATACAAAGCCTTGCCCGAAATGTCACAAACCTGTGGAGAAGAATGGTGGGTGCAATCTTGTTAGCTGCATTTGCGGTCAAGCATTTTGTTGGCTGTGTGGTGGAGCCACTGGTCGGGACCATACGTGGTCCAGCATCTCTGGTCACAGTTGTGGTCGTTATAAAGAGGAAACAGAAAAAAAAGCACAACAGGCAAAGAGAGATCTACTCTTTCGATCAAGACGGGTCCTCTCATACTCATACCCATTTGCATTTTATATGTTTGGAGATGAGCTTTTCAAGGATGAGATGACAAACGAGGGACGGGAAATCAAACAGAATTTATTTGAGGACCAGCAACAGCAGCTTGAAGCAAATGTTGAGAAGCTCTCCAAGTTTTTGGAAGAGCCCTTTGATCAATATTTTGAAGAACGGGTAATGGAGACAAGGATGCAAGTTATCAATTTGTCAGTAATAACGGATACCCTCTGTAAGAAAATGTATGAATGCATCGAGAATGACTTATTGGGTTTTGTCAACCTTGGTAATCACAATATTGCTCCATACAAGTCAAAAGGAATCGAGAAGGCATTGGATTTTTATGCATGTTGGAACGATAGCACAAATAAGGCTGATAAACATCTGGCATCGGGCTGTGGCACTAGTGGTAGATTGGATGAAACATCAGAACTTGATAGACCCTCGGGCTCCGGCAATTCAGATGAGAGCGGGTGCTCTTCTCGGAAGCGGGCCAGAAAGGGAAGTGTTGGAGGCAGCTTCTTTGATCTGAACTTACCTGCAGAGGCCTGGGCTGTTGGCTGGGTGCGGGGAAGTATGGAAGAAGAAGGTATTGGTATGGTTTTGGCCAAAGCTATGGAGCTGAGGTTGAAGATCAGCAACTGTATTCACAATGCGACTGCGACGACGATCGATTCACGAGCGCACGACCCGTTGGCGAAAAAGCAAGATGAGGCCGAAGGCGATGGAGGTTCTGGTTCGCGAAGCACTGTGTCTGAAGTTGGAGAAGCAAAGGAAGATGAAGAAGCGGAGAGGCTTCTGAATATATGCGATGCCCTTGAGTCTCTTGAGACTCAGCTCGCTTCGTTGCAGGCTTTGCAACAGCAACAACGATATGAAAGAGAAGCAGCCCTTTCAGAGATTGAGCACAGCCGGAAAATGTTACTGGATAAGCTCAAAGAGTACAAGGGGGAGGATTTGGAAGTTATACAAGAGGCTTCTGCTTTTGCTGCTGAGTCAGTGGAGCATAATCATGATCTTATGCTTCCTCCATACCCAATTTGTCCTCCACATTCTATTAGACTTGAAAATGGCTATTTGACCCGTAAATCTTTACGAAATGGGTTAACCTCGAGCTTCCCTTCAAATGAAGCGAAGAAGGAAATGAGTGAGTCATTTACAAATCATAAACAGACCGAGTCCAAAAAAGCGAGAAGCGGAGTTGGATCATTCGCAAGTGCTGCAGCGAAAACAGTGTTTACCGTCATCGGAGTGGTATCGATATTATGTTTATCTGGTTTTGGACAAGAGTTTGCGAAAAGATCTATATCTTTGAGGGCGTTGGACATGTTCAAACAGCCGAAGAAGGAAGAATTGGGCATGATTTCTGGATGCCCTCCAGGCAAAGTTCTTGTAGTGGCAGATGGTGAAGCTCGGTGCGTCGTGAAAGAGAGAATTGAAATTCCATTTTCTTCCGTTGTTGCAAAACCAGATGTGAACTATGGATGTGGTTGA 2382 44.12 MDLLSLREHHARTLLIHYRWDVENLFAVLVEKGKSSLFAAAGVRVSEHPNLDASASASALTCDVCMEELDSKKATVMDCGHCFCNDCWTEHFIVKINEGQSRRIRCMSYKCNAICDESAVRNLVSQRHPDLADKFDRFLLESYIEDNKKVKWCPSTPNCGNAIRVEDDEFCEVECSCGLQFCFSCLSEAHSPCSCLMWELWIKKCRDESETVNWITVHTKPCPKCHKPVEKNGGCNLVSCICGQAFCWLCGGATGRDHTWSSISGHSCGRYKEETEKKAQQAKRDLLFRSRRVLSYSYPFAFYMFGDELFKDEMTNEGREIKQNLFEDQQQQLEANVEKLSKFLEEPFDQYFEERVMETRMQVINLSVITDTLCKKMYECIENDLLGFVNLGNHNIAPYKSKGIEKALDFYACWNDSTNKADKHLASGCGTSGRLDETSELDRPSGSGNSDESGCSSRKRARKGSVGGSFFDLNLPAEAWAVGWVRGSMEEEGIGMVLAKAMELRLKISNCIHNATATTIDSRAHDPLAKKQDEAEGDGGSGSRSTVSEVGEAKEDEEAERLLNICDALESLETQLASLQALQQQQRYEREAALSEIEHSRKMLLDKLKEYKGEDLEVIQEASAFAAESVEHNHDLMLPPYPICPPHSIRLENGYLTRKSLRNGLTSSFPSNEAKKEMSESFTNHKQTESKKARSGVGSFASAAAKTVFTVIGVVSILCLSGFGQEFAKRSISLRALDMFKQPKKEELGMISGCPPGKVLVVADGEARCVVKERIEIPFSSVVAKPDVNYGCG 793
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 23101189 23112084 + BLOR07106 Blo15g00712 71112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00712 793 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 55 147 IPR013083 -
Blo15g00712 793 Pfam Ariadne domain 287 479 IPR045840 -
Blo15g00712 793 Gene3D - 285 386 - -
Blo15g00712 793 Gene3D - 191 284 - -
Blo15g00712 793 SMART ibrneu5 133 195 IPR002867 -
Blo15g00712 793 SMART ibrneu5 203 268 IPR002867 -
Blo15g00712 793 SUPERFAMILY RING/U-box 203 269 - -
Blo15g00712 793 SUPERFAMILY RING/U-box 133 202 - -
Blo15g00712 793 ProSiteProfiles Zinc finger RING-type profile. 62 106 IPR001841 -
Blo15g00712 793 Coils Coil 569 589 - -
Blo15g00712 793 ProSiteProfiles TRIAD supradomain profile. 58 272 IPR044066 -
Blo15g00712 793 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 1 286 IPR031127 GO:0004842|GO:0016567
Blo15g00712 793 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 287 403 IPR031127 GO:0004842|GO:0016567
Blo15g00712 793 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 1 286 - -
Blo15g00712 793 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 287 403 - -
Blo15g00712 793 Coils Coil 594 614 - -
Blo15g00712 793 Pfam IBR domain, a half RING-finger domain 134 195 IPR002867 -
Blo15g00712 793 MobiDBLite consensus disorder prediction 666 690 - -
Blo15g00712 793 MobiDBLite consensus disorder prediction 523 556 - -
Blo15g00712 793 MobiDBLite consensus disorder prediction 524 538 - -
Blo15g00712 793 SUPERFAMILY RING/U-box 58 145 - -
Blo15g00712 793 MobiDBLite consensus disorder prediction 433 460 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo02g00793 Blo15g00712 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00793 Blo-Chr2:26821353 Blo15g00712 Blo-Chr15:23101189 2.27E-149 dispersed
Blo07g00352 Blo-Chr7:5609626 Blo15g00712 Blo-Chr15:23101189 4.89E-07 dispersed
Blo15g00712 Blo-Chr15:23101189 Blo18g00504 Blo-Chr18:6355363 5.02E-42 dispersed
Blo15g00712 Blo-Chr15:23101189 Blo17g00514 Blo-Chr17:8162243 6.54E-46 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00712 K11968 - csv:101205066 800.431