Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00713 ATGATGAGGTACAACGAAATCTCCCATTGGAGCCACCCTCAACACACTTTGAAATTCGAACACGCAGAGTCGCCATTCAAGTGCGACGGCTGCATGGAAGTAGGCATAGGGTCGCGCTACAAATGCGGCGCATGCGACTTCGATCTACACACCCACTGCGCCGTCCCTTCGCCCTCCATCGCCCACCCTTTTTACACCATGTGTTCCTTCCAGTTCATGTCCCGCCCGCCAGGCGACACCCCTCGCTTCTGCAATGCCTGCGAGAAGGACGTCTCCGGCTTCGTCTACCACTGCAAATCCTGTGGCTTCGACATCCACCCTTGCTGCGCCAAGCTCCCAATGATGCTCGACGATGGCATAGTGAAGCTCTTTCTGTACAGAAAAGTTAGTGCGTCATGTCACAGGTGCGGTCGAAAGGGAAGAAGCTGGAGTTACAGATCAACGTGCAAGAAGTACAATCTGCATGTAGCCAAAGTGAAGGAAATGCTGGTCGAGAGTTGGCATGAGCTCTACCATGGACGAGGGAAAAGTAAGAAATTGGAAACCAAAATTCCTAGCCTCAAGAATACCCTTCAAAATCAGCCTGCCAAGAGCAAAGGGAAGGCTCAAAAGTGCTGTGAAATGGCTGGCATGGCTGTGCAGTTCGTGGTCTCTGCAGTTCTTGGTGATCCCACGATTCTTATTGCTGGGTGCGATTCGGACCCCACATACCGGAACAGTATTTCCTTGCCAAGCCTGGAAAGAATCAATGAATGCTACACATGGACGATCTATGCAAACAAGGTGTTAAACATGGGTTGCATTTATAGTTTCTGGAGGCAACTGAACAAGGAGCAGAAACTGGCAAAGCAAAGATACATTCAAATGCTATACAATCTTCAATTCAAGAACTTGGTCCAAAATGTACCCATTGCAATTGATGAAGCTCCATCGCAAGTGCCTAAGTCGGTTGCTGTCAAACCTCTATCCGCCCAAAGGAATAGTCTCGAGATTTCATCATATGGAAACTGCTTGGAAGCTGCGGCCGATTGGGGCGGTCGATCGGCAAGGTGCGATCAAGCGTCGATCGACCTGTGTGATGATGGGTATTTTTTAAAGGCAGACATTACAGCTATTCATGGTGGTTGTTTGTTTGAGACGGTGGAGCTAAGGCAACATGAAACGACCGAGGGGAAGGTCAGAATGAGGTATTCAGCTGATAATAACAGTAAGCAGTCGTGTGACCAAGCTCCTGCAATTTTGGCATTTGGGGCTATTGGAGGGGAGGCCATCCTTGGAGATGTTGTGAAGTTAACTGTGAAGTTTTGTGAGTCTAGCCAGAGAAGTAAAAGAAAATATTTGAGCAAGAGCATTTCATACCTCAGATGCAGTAGAATAGCAGGCAATTTGATTGAGTAA 1398 48.21 MMRYNEISHWSHPQHTLKFEHAESPFKCDGCMEVGIGSRYKCGACDFDLHTHCAVPSPSIAHPFYTMCSFQFMSRPPGDTPRFCNACEKDVSGFVYHCKSCGFDIHPCCAKLPMMLDDGIVKLFLYRKVSASCHRCGRKGRSWSYRSTCKKYNLHVAKVKEMLVESWHELYHGRGKSKKLETKIPSLKNTLQNQPAKSKGKAQKCCEMAGMAVQFVVSAVLGDPTILIAGCDSDPTYRNSISLPSLERINECYTWTIYANKVLNMGCIYSFWRQLNKEQKLAKQRYIQMLYNLQFKNLVQNVPIAIDEAPSQVPKSVAVKPLSAQRNSLEISSYGNCLEAAADWGGRSARCDQASIDLCDDGYFLKADITAIHGGCLFETVELRQHETTEGKVRMRYSADNNSKQSCDQAPAILAFGAIGGEAILGDVVKLTVKFCESSQRSKRKYLSKSISYLRCSRIAGNLIE 465
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 23142313 23156389 - BLOR07107 Blo15g00713 71113

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00713 465 Gene3D Glycogen Phosphorylase B; 229 255 - -
Blo15g00713 465 SUPERFAMILY Cysteine-rich domain 59 116 IPR046349 -
Blo15g00713 465 Pfam C1 domain 75 110 IPR004146 -
Blo15g00713 465 Pfam C1 domain 11 54 IPR004146 -
Blo15g00713 465 Gene3D Glycogen Phosphorylase B; 256 298 - -
Blo15g00713 465 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 2 231 - -
Blo15g00713 465 Gene3D - 78 112 - -
Blo15g00713 465 SUPERFAMILY Cysteine-rich domain 4 64 IPR046349 -
Blo15g00713 465 ProSiteProfiles Zinc finger phorbol-ester/DAG-type profile. 14 68 IPR002219 -
Blo15g00713 465 Gene3D - 20 67 IPR043145 -
Blo15g00713 465 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN PROTEIN 2 231 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00713 - - - pvy:116145368 426.017
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo02g00791 Blo15g00713 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01659 Blo-Chr1:56346984 Blo15g00713 Blo-Chr15:23142313 8.91E-24 dispersed
Blo02g00791 Blo-Chr2:26819201 Blo15g00713 Blo-Chr15:23142313 1.40E-126 dispersed
Blo15g00713 Blo-Chr15:23142313 Blo18g00487 Blo-Chr18:5885537 1.55E-52 dispersed
Blo15g00713 Blo-Chr15:23142313 Blo16g00861 Blo-Chr16:36123918 1.40E-14 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g537 Blo02g00791 Blo15g00713 Bda06g01014 Bda08g00905 Bpe07g00412 . . Bma12g00494 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bhi10g02040 . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0024796 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo15g00713 Blo_Chr15 FPKM 10.190476 12.915355 10.618069 10.281219 12.473742 12.220095 12.46915 9.08623 9.073456 9.191508