Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00719 ATGGCAAGGTTTCTGAGTAACATTCTGATTGCTGAGACTCCACTAACCCTTGATGAGAATGAAAATAGCATAGAGTACTCCTTTGCGTTGAAGTATCCAGGTCCGGCAATCAATTTCTCAATTCCACGAGCAATTCCTGTCAACATTGATGAAATACCGACTGCATCTTTAGTCGTTCCAGCTTCTCAGTTCAATAGTTTATTATTACCAATTGTACAACCCATCAAGAAAAAATCCGTGTGGGGGACAAAAATGAGTCCTAAATCAGTTGTTTCGTCAAGTTCTGTAACTCCGAAAGCAGATTCAGATTGCCCAGACTCCCCTAGGATAGAAATTAATTACTCGAACGCTGAACCTGATGGTGACTGTCCGGCCAAGTTGTTTGATGAATTTGAAAGCTCTCCTACGCTGGATCTTTGCGACCAATCAAAAGAAAAATTAGAGAGTGACATAGAATTAGCTGAAGACGAAAATGATGAAAGTTCCGAAAGTGATATAATTTCTCCTGATCAGGAATCAGCAGATTCCATGTTAAGTTCGTCATCCGAGATTGTTTTGTTAGAAGAAGAAGAGTGTGAGAACAAAAAGCAATCAACTGTTACTTTTTGTGATCCCGAATCAAACAAAATAATCAGCGAAGGATCAAGTCAATATGAGACACAAAATATCCAAGTCAGGCCAAAGGCTCAAAGAAAGGGGAAAAGGGGATCATGTTATCGATGTCTGACAGGAAACCAGTTGACAGAGAAGGAAATGTGTATTGTTTGTGGAGCAAAGTATTGTCGTAAGTGTGTGTTAAGAGAAATGGGGTCAATGCCTGAAGGGAGAAAATGTGTGAGTTGCATCGGCTTTCATATTGATGAATCGAGACGAGAAAGCTTGGGAAAGTGCTCAAGATTGCTTAAAAGGATGCTTTCAGATATGGAGATCAGAATTATTATGAGGGCCGAGATGGAGAGTCTGGCGAATCAGCTACCACCCAAGCTTGTTTGCGTGAATGATATCCTTTTAAGTAAAGAGCAACTTGGTATTTTGCAAAGTTGCCCAAATCCACCAAAAAAACTCAAACCAGGATCATTTTGGTATGACAAAGTATCTGGTTTTTGGGGGCAGACAGGAAAGCAGCCCTGTCAGATTATCAGCCCACACTTAAATGTTGGGGGTCAAATCAAGAAAGATGCTAGCAATGGAAACACAAATGTCTTTATAAACAATAGGGAGATCACTAAGAAGGAGCTCTACATGCTCAAGAAGCTACCTTTCTGCAATGCCGATTTAAATGTAATCATCGTACTTGCCTGTGGTAAAACTAAGCTGGTTTGTGCTGTATTATCTTTGCCATTGCCGCATAATCCAATAAATTCTGGAGCAGAAGAAGTTGAGAAGGTTGCTCCCAATTCCATCGATAAATCAACTCTTTATAGGCTTCTCCTTGTTGGGTATAATAAATCTGGCACCAGTACTTTTTTTAAGCAGTGTAGAAGCCACATATACTCAGCTTTTCCGTTAATGTCTGTCATCTATTTTCCATCGCTAATTCAAGCTAAGAGTCTGTACAACATTCCTTTCTCTAAAGATGAGCGCCAAAATATTAAGGTCGTGATCCAAAGAAATTTATATGGATATATTGGAATATTGCTTGAGGGACGTGAACGATTTGAAGAAGAGGCATCTAATGAGGGGAAAATGCTAAGATTCAATCAGTTGGATCCTTCAGATTCTATAGAGTTGGATGTGAGGAACATTGATAAGAGAACAACTTATGCGATCGGCCCAAGACTGAAAGCTTTTTCAGATTGGCTCCTAAAGGTCATGGTGTCTGGAAATTTGGAGGCTATATTTCCCGCTGCTACTCGAGAATACGCTCCATTTATTGAGGATTTATGGAGAGATCCTGCCTTTCAAGCTACATACATACGAAGAAATGAATTAGAACTTCTACCAAGAATAGCTACTTATTTTCTCGATCGGGCTGTGGAAATTTCAAAGATCGATTACGAGCCGTCTGACAATGACATTTTATATGCCGAAGGAATTTCAGCTTCTAATGGTCTGAGTGAAGTGGAATTTTCATTTCCAGAATCACCACGGGATTTTGTTCTTGATCAACTATACGAGCATGATCCTTCACAAAAATACCAGCTCATTAGAGTTCATCCCAGTAGCGTTGGAGAGAATTGCAAATGGCTTGAAATGTTTGAAAATGTCAACATTGTTCTATTTTGTGTCTCCTTGACAGATTACGATGAATTTCACGACGATCAATTTGGAAATTCTATTAACAAGATGATAGCGAGTAAGAAACTCTTCGAAAGCATCATTCAATGTCCGACCCTGAAGAAGAAACACTTTCTTCTCATTCTTAACAAGTTTGATTTGCTCGAGGATAAAATCAAGCAAGTTCCTCTCTCTCGATGTGAATGGTTCGACAACTTCAATCCGTTGATTAGCTCCCATTTTAAAGTCAGCGGATCGAATGGCATGAATATTTCGTTGGGTCAGCAAGCATTTCAATACATTGCAGTGAAGTTTAAGAGACTCTTCAGCTCTTACACAAATAACAAGCTTTTTGTTTCTTTGAGTACTGGAATGGAGCCTGATTCTGTAAATGAAACTCTAAGATATGCAAGGGAGATCCTTAAATGGCGGAAAGAGGATGCTGCTTTGTTTCCTGAGTTGTCATCTGTGAGCATTGAGGGGGCAAACGGGTCCATGAGCAGAGAAGGAATGGTCTCTCACAGGGTCGATTCTCTCTCCTCACCTTCTCTGCCATCTCTCCTCGTCTCCTTCAAATCTTCGTCTCCTCCTTTTCTAGCTTTGCATAACGATAGCTTTACACTTCCTACTTTCTCTCTCATCTCCCCCAGTTCTGTCCTCCAAGTCTGCACCATGGCAGACATCCTGCTCCACACAGTCAGAGAAAATCCCAAAAATGGAGATTTTCTCGCCAACTATTCCTGA 2961 40.32 MARFLSNILIAETPLTLDENENSIEYSFALKYPGPAINFSIPRAIPVNIDEIPTASLVVPASQFNSLLLPIVQPIKKKSVWGTKMSPKSVVSSSSVTPKADSDCPDSPRIEINYSNAEPDGDCPAKLFDEFESSPTLDLCDQSKEKLESDIELAEDENDESSESDIISPDQESADSMLSSSSEIVLLEEEECENKKQSTVTFCDPESNKIISEGSSQYETQNIQVRPKAQRKGKRGSCYRCLTGNQLTEKEMCIVCGAKYCRKCVLREMGSMPEGRKCVSCIGFHIDESRRESLGKCSRLLKRMLSDMEIRIIMRAEMESLANQLPPKLVCVNDILLSKEQLGILQSCPNPPKKLKPGSFWYDKVSGFWGQTGKQPCQIISPHLNVGGQIKKDASNGNTNVFINNREITKKELYMLKKLPFCNADLNVIIVLACGKTKLVCAVLSLPLPHNPINSGAEEVEKVAPNSIDKSTLYRLLLVGYNKSGTSTFFKQCRSHIYSAFPLMSVIYFPSLIQAKSLYNIPFSKDERQNIKVVIQRNLYGYIGILLEGRERFEEEASNEGKMLRFNQLDPSDSIELDVRNIDKRTTYAIGPRLKAFSDWLLKVMVSGNLEAIFPAATREYAPFIEDLWRDPAFQATYIRRNELELLPRIATYFLDRAVEISKIDYEPSDNDILYAEGISASNGLSEVEFSFPESPRDFVLDQLYEHDPSQKYQLIRVHPSSVGENCKWLEMFENVNIVLFCVSLTDYDEFHDDQFGNSINKMIASKKLFESIIQCPTLKKKHFLLILNKFDLLEDKIKQVPLSRCEWFDNFNPLISSHFKVSGSNGMNISLGQQAFQYIAVKFKRLFSSYTNNKLFVSLSTGMEPDSVNETLRYAREILKWRKEDAALFPELSSVSIEGANGSMSREGMVSHRVDSLSSPSLPSLLVSFKSSSPPFLALHNDSFTLPTFSLISPSSVLQVCTMADILLHTVRENPKNGDFLANYS 986
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 23812085 23817160 + BLOR07113 Blo15g00719 71119

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00719 986 MobiDBLite consensus disorder prediction 88 109 - -
Blo15g00719 986 Coils Coil 137 164 - -
Blo15g00719 986 Gene3D - 525 674 IPR011025 GO:0007165
Blo15g00719 986 Pfam G-protein alpha subunit 466 879 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Blo15g00719 986 Gene3D - 675 888 IPR027417 -
Blo15g00719 986 SUPERFAMILY Transducin (alpha subunit), insertion domain 523 676 IPR011025 GO:0007165
Blo15g00719 986 SMART galpha_1 454 889 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Blo15g00719 986 MobiDBLite consensus disorder prediction 152 166 - -
Blo15g00719 986 ProSiteProfiles G-alpha domain profile. 472 899 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Blo15g00719 986 PRINTS Alpha G protein (transducin) signature 736 764 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Blo15g00719 986 PRINTS Alpha G protein (transducin) signature 475 490 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Blo15g00719 986 PRINTS Alpha G protein (transducin) signature 784 793 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Blo15g00719 986 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 436 495 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Blo15g00719 986 PANTHER EXTRA-LARGE GUANINE NUCLEOTIDE-BINDING PROTEIN 2 436 495 - -
Blo15g00719 986 PANTHER EXTRA-LARGE GUANINE NUCLEOTIDE-BINDING PROTEIN 2 514 899 - -
Blo15g00719 986 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 514 899 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Blo15g00719 986 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 471 883 IPR027417 -
Blo15g00719 986 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 16 418 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Blo15g00719 986 PANTHER EXTRA-LARGE GUANINE NUCLEOTIDE-BINDING PROTEIN 2 16 418 - -
Blo15g00719 986 MobiDBLite consensus disorder prediction 140 175 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00719 - - - mcha:111017232 904.434
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00599 Blo-Chr5:15256208 Blo15g00719 Blo-Chr15:23812085 0 dispersed
Blo15g00023 Blo-Chr15:168508 Blo15g00719 Blo-Chr15:23812085 3.06E-62 dispersed
Blo15g00719 Blo-Chr15:23812085 Blo16g00460 Blo-Chr16:18324997 6.63E-07 dispersed
Blo03g00247 Blo-Chr3:5315132 Blo15g00719 Blo-Chr15:23812085 8.21E-06 transposed
Blo16g00262 Blo-Chr16:6130798 Blo15g00719 Blo-Chr15:23812085 6.14E-58 transposed
Blo15g00719 Blo-Chr15:23812085 Blo02g00815 Blo-Chr2:28900722 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g526 . Blo15g00719 . . Bpe07g00403 . . Bma12g00482 . . Cma02g00427 Cma20g00879 Car02g00284 Car20g00758 . . . . . . . . . . . . . . . . . Cone12ag1124 Cone8ag1168 . . Lsi10g00329 . Chy11g00419 . . . . . . . . . Sed05g3643 Cmo02g00428 Cmo20g00886 . . . . . Cpe05g01234 Bhi10g02061 Tan05g1365 Cmetu11g1444 . Hepe08g1048 . . Cla09g01736 Cam09g1830 Cec09g1890 Cco09g1983 . . Cre01g0680 . Csa02g01217 . Cme11g00480
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004689 1 2 2 2 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 1 4 1 42
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo15g00719 Blo_Chr15 FPKM 6.635582 6.685773 6.593317 7.017756 4.738912 4.163784 6.547423 14.470884 14.410081 14.478056