Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00737 TTAGGAAAAGCTCTTGCCTTAGCTCTTGGAAATAAAGGAGTATTTGTGACCATCGTTGATTTCTCCGAAGAAAAAGGAAGGGAAGTTGCTTCTTCTATTGAAGAAAAGCATATGGAGTTCCATTCGAAGTTAAAATTTCCGTGTACTTTGTTCATAAAATGCGATGTAACAAACTCAAGAGATCTAGCATATGCTTTTGAAAGGCATTTGGCAACATATGGAGGATTGGATATATGTATTAACTGTGCAGGACTTGCCAGTGAAGTACCATTCCATAAGGATCAAACAGACGGTAATCGAACATGGAGACGCACTATTGATGTCAATCTGACTGGAGTTATTGAGTGCACTCGCCTTGCGATAAAAGCCATGCAATCTGTTAAAAAAACTGGGGTGATTATCAATTTGGGTTCTGCTTCTGGTCTTTATCCAATGTATTTCGACCCTATCTATTCTGCTTCCAAAGGAGGCGTTGTTATGTTTACTAGATCACTTGTTCTTTTCAAACGTCAAGGTATTCGCATCAATGTTCTTTGCCCTGAGTTTGTGGAAACTGACATGGGTTCTAAGATTGACCCCAAATTTGTGAAACTAATGAGCGGCTTTATTTCAATGGAAATGGTGGTCAAAGGTGCTTTTGAGTTAATTACGGATGAGAGCAAAGCTGGTGCATGCCTCTGGATTACAAATCGTCGAGGCATGGAAGTTGTTCACACTTTGAGTCACAATTTTCGTAATGCAACTAACATAGTGCGGACTCCATTGAGATTACCAATTGAATCAAATCATGTTCTTCTGAAAATTATATACGCTGGTGTAAATGCTAGTGATGTAAATTTTAGCTCCGGTCGGTATTTCAGTGGCGGCAAGGATGTTGGCTCCCAACTTCCATTTAATGCTGGTTTTGAGGGTGTGGGAATAATTGCAGCAGTAGGTGATTCTGTCTCTGGTCTACAAATTGGTACTCCGGCTGCAATAATGACGTTCGGAAGTTATGCAGAATTTGTTATGGTCCCTTCAAAACACATCCTTCCTGTTGCGAGACCAGATCCAGAAGTTGTTGCGATGCTAACATCAGGGTTGACAGCATCAATTGCCCTGGAAAAGGCAGGGCATATGGAAAGGGGAAAAATAGTTCTTGTTACTGCTGCTGCAGGAGGGACTGGCCAGTTTGCCGTTCAGCTGGCTAAATTAGCTGGAAATAAGGTTATTGCAACTTGTGGAGGTAAAGAGAAGGCCAATCTTTTAAAAGATTTGGGAGTGGATCGAGTTATAGATTATAGAGCTGAAAACATCAAAGAAGTTCTAAAAAAGGAATATCCCAAGGGTGTTGACATCATCTATGAGTCTGTTGGCGGTGACATGTTCAATTTGTGCTTAAATGCTTTGGCTGTCTTTGGACGACTCATCGTGATTGGAATGATCTCTCAGTATCAAGGAGAACATGGATGGAAACCTCTGAATTACACGGGACTGTGCGAGAAAATTTTGGCCAAAAGTCAAACTGTAGCTGGATTTTTCCTAGTGCAATATGGTCATCTATGGCAACAACATTTGGACAAACTAATCAATCTCTACTCCTCGGGACATCTAAAGGTTTTAATTGATCCCAAAAGATTTTTGGGTGTCAATGCGGTCGCAGATGCGGTTGAGTATCTCCATTCGGGGAAAAGTGTGGGGAAGGTA 1686 41.16 LGKALALALGNKGVFVTIVDFSEEKGREVASSIEEKHMEFHSKLKFPCTLFIKCDVTNSRDLAYAFERHLATYGGLDICINCAGLASEVPFHKDQTDGNRTWRRTIDVNLTGVIECTRLAIKAMQSVKKTGVIINLGSASGLYPMYFDPIYSASKGGVVMFTRSLVLFKRQGIRINVLCPEFVETDMGSKIDPKFVKLMSGFISMEMVVKGAFELITDESKAGACLWITNRRGMEVVHTLSHNFRNATNIVRTPLRLPIESNHVLLKIIYAGVNASDVNFSSGRYFSGGKDVGSQLPFNAGFEGVGIIAAVGDSVSGLQIGTPAAIMTFGSYAEFVMVPSKHILPVARPDPEVVAMLTSGLTASIALEKAGHMERGKIVLVTAAAGGTGQFAVQLAKLAGNKVIATCGGKEKANLLKDLGVDRVIDYRAENIKEVLKKEYPKGVDIIYESVGGDMFNLCLNALAVFGRLIVIGMISQYQGEHGWKPLNYTGLCEKILAKSQTVAGFFLVQYGHLWQQHLDKLINLYSSGHLKVLIDPKRFLGVNAVADAVEYLHSGKSVGKV 562
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 24773047 24800554 - BLOR07131 Blo15g00737 71137

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00737 562 Gene3D - 1 234 - -
Blo15g00737 562 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 352 529 IPR036291 -
Blo15g00737 562 PRINTS Glucose/ribitol dehydrogenase family signature 74 85 IPR002347 -
Blo15g00737 562 PRINTS Glucose/ribitol dehydrogenase family signature 125 141 IPR002347 -
Blo15g00737 562 PRINTS Glucose/ribitol dehydrogenase family signature 171 188 IPR002347 -
Blo15g00737 562 PRINTS Glucose/ribitol dehydrogenase family signature 151 170 IPR002347 -
Blo15g00737 562 Pfam short chain dehydrogenase 1 192 IPR002347 -
Blo15g00737 562 SMART PKS_ER_names_mod 242 562 IPR020843 GO:0016491
Blo15g00737 562 Pfam Zinc-binding dehydrogenase 387 520 IPR013149 -
Blo15g00737 562 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 376 397 IPR002364 GO:0008270|GO:0016491
Blo15g00737 562 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 229 IPR036291 -
Blo15g00737 562 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 IPR002347 -
Blo15g00737 562 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 IPR002347 -
Blo15g00737 562 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 IPR002347 -
Blo15g00737 562 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE 236 562 - -
Blo15g00737 562 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE 79 235 - -
Blo15g00737 562 Pfam Alcohol dehydrogenase GroES-like domain 262 326 IPR013154 -
Blo15g00737 562 Gene3D - 237 562 - -
Blo15g00737 562 SUPERFAMILY GroES-like 248 380 IPR011032 -
Blo15g00737 562 CDD Mgc45594_like 236 562 - -
Blo15g00737 562 PANTHER BNAA08G02470D PROTEIN 236 562 - -
Blo15g00737 562 PANTHER BNAA08G02470D PROTEIN 79 235 - -
Blo15g00737 562 Gene3D - 355 533 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00737 - - - zju:107427080 892.108
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01260 Blo-Chr3:38823954 Blo15g00737 Blo-Chr15:24773047 1.22E-14 dispersed
Blo11g00681 Blo-Chr11:7770127 Blo15g00737 Blo-Chr15:24773047 7.28E-28 dispersed
Blo14g00367 Blo-Chr14:3993418 Blo15g00737 Blo-Chr15:24773047 5.99E-24 dispersed
Blo15g00737 Blo-Chr15:24773047 Blo06g01064 Blo-Chr6:34001164 1.37E-20 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g430 . Blo15g00737 Bda06g01055 . Bpe07g00392 . . Bma12g00464 . . . . . . . . . . . . . . . . . . . . . . . Cone12ag1101 Cone8ag1142 . . . . . . . . . . . . . . . . . . . . . Cpe14g00299 Cpe01g00449 . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007124 2 2 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 1 1 1 37
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo15g00737 Blo_Chr15 FPKM 15.129412 10.819112 20.753841 20.212843 3.024642 2.589588 4.155986 41.845284 41.953121 41.604683