Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00739 ATGTTTCCGTGGAACCTCGCTAAGTCGGCCGAGGAGATGTTTTCCCGGTGGGCTCTGAAGAGGTTGTGCAAGTTTTTATTGAAGAAGAAGCTGGGGCAGTTCTTGTTGGGAGATATTGATCTCGACCAGCTAGATGTTCAACTCATCGACGGCACAATTCAACTCAGTGACCTCGCGCTTAATGCCGAACTTCTAAATCAAAAGGCACGCTTATTTTTTACTTTTCATTTATCTGCAGCATCGGTGATCATAAAAGAAGGATCAATTGGCTCCCTTTCAGTAAAAATGCCTTGGAAGGGTAAAGGTTTTGAGGTCGAGGTTGATGAACTTGAAATTGTGCTTGCACCTCTTCGAACAGAAAATACTCTTACCATTCAAGATGAATCTTTTGGTTCTGCTGAGAAAAATCACCAACCTCAAGAGTTGGGATCACGTCATGATGCAACTGAATCTTCTGTAAAGTCCACATCTGTTCATGAAGGAGTAAAGACAATAGCAAAGTTGGTAAAGTGGTTACTTACTAGTTTCCATGTAACAATTAAGAAGCTGATTATTGCATTCGATCCATTTTCAGCAGAAGATAGAAAGCAGACAGGTTGTAAATCAACACTGGTTTTTCGAATTTCAGAAATAGAATGTGGTACTTGTGTTTCTGACTCTGGTAATTCAGATGCCAATCCAAAAGTTGAGAGCTTTCTTGGAATGAGTGAATTAACAAATTTTGTGAAGTTTCATGGAGCTGTACTAGAACTTCTTCAAATAGAGAATGTTGATAAACAAATGAATTTGGGCAATGCCACTGAAAGAACCTTGGGTGGTTTGTCTTCTGTTTTTTCTCCATCAGGTGTTACTGTACCAATTTTGTCTGGCAGAATTGGTGGATTTTCAGGAAATTTAAAATTTAGTGTACCTTGGAAAGATGGTTCCTTTGACATTTGTAAAGTTGATGCAAATATTGTTATTGATCATGTCTATCTCAAACTTCAACTGAGCACAATCAAGCAATTCCTACTCTTATGGGAGGCATATACGAATTTGAACAAGGAAGGTTCAAGTTATCATGACAAACTGATTGATTCTGCTGCACTTACTTATGGCAATAATTTTGCATCTTGTGGTCGTTTTCCATCGGATTTCTCTTCATCAACAATGCATGAATCACTAAATGAAGGTCTTCTACATCATTCACATCTCATACCAGATTGGCTACCATTTTCTTTCAAAGATAGCAGAGAAGAAAATATTGGAGTGGGAGAACTTGATTTTGGGGAAAGTGTGGACCAATTCTTTGAGTGTTTAGACGAAATGAGAAGTTCCCAATCTGCATGTGGAAACAGTGGCATGTGGAACTGGAAAAATTCTGTTTTCAGTGCCATTACTGCAGCATCCAGCCTTGCTTCTGGATCTTTACATATTCCCTCGGATCAGAAGCATGTTGAAACAAATCTGAAAGCAACTTTTGCTGGACTTTCTATTACACTTTCATTTCATGATGACGACCAGACTAACTTATTAGATGAGCGAATTAATGGGAGCTCAGAGCAGCATTTTGTGGCTGCAGAGTGCCGTGACATAATTCTTGTTACACAGGTCTCTCTTCAAGAAATGAGGTTTCATGGGACAGTCGAGTATATGGAGGTTTCTGATTATATAAGCTATAAAGAAAATGACATGGACATTGGTTTTTTGATTCAATATCTCCAAGCTAATGTTCATGATGCCCTCCCTCCACTTCCTGTGTCATTCAATGATCATGATACGGATTTAGTTAATGATTCAGGTTCTTCAAAGTTTATACTTGGTAACAGCGTTGATGTCACAAAAGTAACCTTGCTTAAAACTTCTGGTATCACCTCTTGTCAAGTAAATGTCATGACAAGTTCCCAAGATGAAAATTCCAAATTGTCAAATTCATTTTCATTGAAACTGTCACCCTTTGTTCTATGGGTTAATTTTCCCTTAATAAGCTCCTTACTGGATTTTCTGAAGAAAGTTGAAAAATATGTAGTGTTGAATGAGGAAAAGAATGTCTTTTCATCGAAGGCTTTCCAAAAAAATCATGGAACATGTGAAAAGGATGTCGAAAGAAACCCCGTTCATGTGAAAACTTTAACTGCAAAAAAATTTCTGGGAGATATATTTATTTCAAATGCAAGGATAATACTATGTTTCCCATTTGAAAGTGGCTGGAGCATAAGGAATTATAGTTCATGGAATCAGTTTATTGCTCTTGATTTTTCTTCGCCTCCGGTTATGGACAAGGGAGTGAGTCAAGAGTGTGATTTGTCACCAAAATCAAGTTTGCAGAAACAATATTTAACAGCTGCAAAGGCTTTGCATTTGAATGTTGGAAATCTTGATGTTTTCTTAATAACTCCAATTTGTGACGGAGCTAAAGTTCACTTTGATAAGATGTGGAGACAGAAATTTAATGCTCATAACATTCTTTCTATCATGAACAACAGAAGACGTAGTCCTGTCATTACAATGTTTTGGCAGGAGGGTCATGTTACAGGTCCATGGATAGCAAAGAAGGCAAGGTCTTTGGCTAGAGAGGAGTCACGGAGCAGATATAAATTTGTTGGAAAAGGTTATGAATTTACTTCTGCGTCAGCTGTGAAAGATATGGAAAAGTTATATTCTCAAACTCGACAAGAAATGATTTTGAGTTCCACTCTGGTCCTACATTTTTCACTTTCTCTTGTTAAGATTCATTTAAACAGTTTCCAGTATAAAGGTGTTAGTTGTCTATTGAATCAGTTGATAAAAGAGTTTTCTAGTGTTGCCTGTGATGCAGCAGATACTGTAAAACAAGTTTCTCCTTCTCAGAGATCTATTGTTGTGGACTGTGATTGTGTGGAAATCTCAATGAATCCAGATACAAAGGATGATATTAAGAGTTCTATTCAGAAAGAGCTTCCTGGATCATGGTATCATCTAAAACTAGAAGTTCAGAAATTTGAGCTAATGTCTGTCTCAGACGTAGGAGGTATTAAAGATGTCAATTTCTTTTGGCTGGCTCATGGTGAAGGCAAACTGTCGGGTTGTATCACAGGAGTTCCTGATCATGCGTTTCTTTTAATCTCGTGTAGCAACACTACTTTGAAGCGTGGGAATGGAGAAGGTTCAAATGTGTTATCATCAAGACTGGCTGGTTCTAATATCATACACATGTTGGACTCTGAGAGTGGCCATGGTTACACAACAATTAATCTAAGATGTATGACATTTGTGGCTGTAGGTGGTAGGCTGGATTGGTTGGATACCATTTCCTCCTTTTTCACATCAACCAAACAAGTAACAGAAAAGACTGTGGAAAGGGAGAATAAAAAAGAATCTTCTGGAGTTACTTTTTTTCTTATCTTGGTTGATGTTGGATTGAGTTATGAACCTTACTTAAATACCTTGGTGGTCTGTAGTGAGCTTCATGGTTTACAGTCTAATTGTTCAATCTCTAACCAAGGTTTGGGTGAGAAATATGTTGCTTGTCTACTGGCTGCATCTTCTCTGACTCTTTCTAATGCAACTGTGGAAGACATAGTTAAAGATGATTACAGAGTTGCAGTACAAGATGTTGGGCTTCTTATAAAGGGTTTGCCAAAGCCTGACAATCTCGGTGGCACTTACAGTGTTGAACATCTTGGCAAGATTGGGTATGTGAAAGTTGCTCGAGAAGCACTCATTGAAGCAACAATGAAAACTAATTGTTCTAGTGGACTTCTGTGGGAGGTAGAATTTTCAAAATGTCATATTTTTATGGAAACTTGCCCTGATACGACCTCCGGTATGATTCGCTTAGCTGCTCAGCTTCAGCAACTATTTGCTCCAGAACTGGAGGAATCAGTTCTGCACTTACAAGCAAGATGGAATAATGTTCAGCAGGCACAAGAGACTGAGCTTTTTGACAATGAATCATCTTCTCCTCACTCTAATGTAGATAAAGTAACTGATGCATGTTTAGTTGGCTTGATGAATGAGATATGTGAAGATGCATTTCTATCAGAGAAGAACCAAAATTTGAAATATGATTCCGCTGAAGTACACATTTGTAATCCACCTGATGAATTTATTCCCATTGAGATTTCTATCCAGGGTCATGAAACTCGCAACAGTTACTGCCCTGGCATTCCCTTCTTTACTGCACCAGAATTAAAAAGGAGTGAAGTCTCGTCTACTCCAGAATGTTCCTATCCTGAGTTCATTGAAGAATATTGTTTGTCAGAGCCGCGCACACTGTCAGAGTCATCTCTTTGTCAGCCAATGTTGCGTGATAGCACTAAATCTAGAAATGAAGATCTGGGAGAAGAAATTAATGGATGGTATGGGAATATGTCACTAACAATTGTGGAAAACCACATTGATGAAAGTTGTATTAGTGAACAATCTGTTGAAGAGGATCTTTCATCCAGTGAAAGTAGAAAGATCTTCAGTTTTGGAAAGGCTGCTGGATGCGTACATTTTACAAATATTGATATCAGCTGGAGAATGTATGCTGGCTCTGACTGGAATGGCAACGGAGAAAATGAAAAGCAAACCATAAAATTTTGCAAGAGGGATGTAAATGCTTGCCTAGAGCTTGCACTAGCAGGGATACAAGTTCAGTACGATATCTTTCTAGATGGTGGACTGTGCGCATCTAGGCTCTCTCTTTCAGTTCAAGATTTCCATCTTTATGACAAAAGTAAAGATGCTCCTTGGAAACTGGTGATAGGATACTACAACTCGAAGGATCACCCCCGGGAATCTTCTTCTAAAGCGTTTAAGATGGAATTAGAAGCTATCAGACCGGATCCTTTGACTCCTCTTGAGGAATATAGGTTACATGTGTCTTTCCTTCCTATACTATTGCATCTTCATCAACAGCAACTTGATTTTCTCATTAACTTTTTTGGGGAAAAAAGCGCATCAAAGGACCAATCGTCTAGTCATCTTCAAAGTTCAGATAATTTAAAATCATTCCCAGTTGCATGTAGAAGTCTTGCAGGGCATACTATTGTCGAAGAAGCACTACTCCCGTATTTTCAGGCAAGTTATGATTTTAAATTTGACGTAAGACCTTCTGTTGTTCGAGTTGATTACAGTCCCAGCCACCTTGATTTAGCTGCATTAAGAGGCGGAAAGTATGTAGAACTTGTAAACCTTGTTCCTTGGAAGGGAGTTGAATTACAACTAAAGCATGTTCATGCTGTTGGCATATACGGATGGAGCAATGTATGTGAAGCAATTATTGGAGAGTGGTTGGAAGATATTTCTCATAATCAGATCCATAAAATTTTGGGAGGTCTTCCAACCATCCGATCATTGGCTGCTGTTGGGGCTGGTGCTTCAAAGCTGGTTTCTTTGCCAGTTGAGAGCTACAGGAAAGACAAAAGAGTACTCAAGGGGATGCAAAGAGGTACCATTGCATTTCTCAAGAGTATTTCTCTTGAAGCTGTTGGATTGGGAGTACATCTGGCTGCTGGAGCTCATGACATTTTGGTGCAAGCAGAATATATAGTGACAAGTAGTCCATCAGTGAATGTCCGATCTAAAGCAAAAGCAAATGCTAGATCTAATCAGCCTAAAGATGCCCAAGAAGGAATACAAAAGGCATGTGAAAGCCTTAGCGATGGCCTTGGTAAGTCTACCTCTGCCTTGGTTCGTACACCTTTAAAAAAATACCAAAGTGGAGCAGGTGCTGGATCTGCATTAGTTACTGCTGTTCGAGCACTTCCGACAGCAGCTATAGCTCCGGCATCTGCATGTGCAAGTGCCTTGCATTATGCTTTTCTAGGCTTTAGGAATAGATGTACAGTTATAGACATTATTATTCCCTTCAGAAATCAAGCTCAAGGAATTAATTTGTCGAGGATGTACAGGTCACTGGCAATAGTCTTTTCTTTTGTTTTTTTTGCTTTGGTCGAAAGTCCACTCCGCATCGTCTCGTTGTTTCAGCCATTCAGTGTTCCGTTCACTTCCCTCCTTGTTCGTTCCTCTGCTCCGCCTCCTAGGGTTGTTCGAGTTTTCGTTTTCATCGCCTCTACTGCTCTGCACTCTGCAATCAATCTGCTCTGCATCGTCTCGCTGTGCCTCTACTGCTACTCTGCACTTGTAGACAGATTTGCTTCGGAGAAATTTTCTCTTCTCGAATCTGCAATGCAGATGTTAGATGAAATATTGCTGCTACTAGTGCACCATGTGATGTCGTCTTTGGATTTGAATCGGGGAAGAGGATTTAGGGTTCCTCTTCCCGATTCTTCCTCCCCGCCGATAGAGAGGAACCGAGAGAGGCAAACGGCGAGGAGAAACGCCGGCGAGGCGAGGCGAGGCGAGGCGGCTTCCGACAACGAGGATAGCAACCTACGACTCCGATCCGACGAGGAACGATCGCACCTCGTCAGTGGCCGCGAGCTTCCGATCCCTAGCGATGCCGGCGACAGAACAGCTCAACCAGAGCGTGTTCCTCCGATTCCGGCGAACGGGCGATATCGGATCCGCGATGACAGCTCCGAGGCCGAGCCGTTTTCGATTTCCGGTGACGAACAGACTTCGATTCTGTTCGGTGGCGATCGAATGAAGGATTCTGGAGGGATGACCTCCGGCGACGGCAGCTCCGGATCTGATTCCGGCGAAAACAAAACCCTCAGTTTTGTTTTGTTCAAATGGGTTTTGACGACTATGGCATGTGTGCTATCATTCATGAGGAGATTGAGGGACGGATTAGCTAGCCCCTTTGATACCTTCTGTTGCGTGAAGGTTGATTGTTTGACGTCGACAACAGATCGGGGCATTGTGACGTGTCCTCAGGTCGAAAGCCCTGAAAATCGTAAACAGTATGGGAGGGTGATGACGCCTCCTAGGGTCGAAAGCCCCTAA 6855 40.86 MFPWNLAKSAEEMFSRWALKRLCKFLLKKKLGQFLLGDIDLDQLDVQLIDGTIQLSDLALNAELLNQKARLFFTFHLSAASVIIKEGSIGSLSVKMPWKGKGFEVEVDELEIVLAPLRTENTLTIQDESFGSAEKNHQPQELGSRHDATESSVKSTSVHEGVKTIAKLVKWLLTSFHVTIKKLIIAFDPFSAEDRKQTGCKSTLVFRISEIECGTCVSDSGNSDANPKVESFLGMSELTNFVKFHGAVLELLQIENVDKQMNLGNATERTLGGLSSVFSPSGVTVPILSGRIGGFSGNLKFSVPWKDGSFDICKVDANIVIDHVYLKLQLSTIKQFLLLWEAYTNLNKEGSSYHDKLIDSAALTYGNNFASCGRFPSDFSSSTMHESLNEGLLHHSHLIPDWLPFSFKDSREENIGVGELDFGESVDQFFECLDEMRSSQSACGNSGMWNWKNSVFSAITAASSLASGSLHIPSDQKHVETNLKATFAGLSITLSFHDDDQTNLLDERINGSSEQHFVAAECRDIILVTQVSLQEMRFHGTVEYMEVSDYISYKENDMDIGFLIQYLQANVHDALPPLPVSFNDHDTDLVNDSGSSKFILGNSVDVTKVTLLKTSGITSCQVNVMTSSQDENSKLSNSFSLKLSPFVLWVNFPLISSLLDFLKKVEKYVVLNEEKNVFSSKAFQKNHGTCEKDVERNPVHVKTLTAKKFLGDIFISNARIILCFPFESGWSIRNYSSWNQFIALDFSSPPVMDKGVSQECDLSPKSSLQKQYLTAAKALHLNVGNLDVFLITPICDGAKVHFDKMWRQKFNAHNILSIMNNRRRSPVITMFWQEGHVTGPWIAKKARSLAREESRSRYKFVGKGYEFTSASAVKDMEKLYSQTRQEMILSSTLVLHFSLSLVKIHLNSFQYKGVSCLLNQLIKEFSSVACDAADTVKQVSPSQRSIVVDCDCVEISMNPDTKDDIKSSIQKELPGSWYHLKLEVQKFELMSVSDVGGIKDVNFFWLAHGEGKLSGCITGVPDHAFLLISCSNTTLKRGNGEGSNVLSSRLAGSNIIHMLDSESGHGYTTINLRCMTFVAVGGRLDWLDTISSFFTSTKQVTEKTVERENKKESSGVTFFLILVDVGLSYEPYLNTLVVCSELHGLQSNCSISNQGLGEKYVACLLAASSLTLSNATVEDIVKDDYRVAVQDVGLLIKGLPKPDNLGGTYSVEHLGKIGYVKVAREALIEATMKTNCSSGLLWEVEFSKCHIFMETCPDTTSGMIRLAAQLQQLFAPELEESVLHLQARWNNVQQAQETELFDNESSSPHSNVDKVTDACLVGLMNEICEDAFLSEKNQNLKYDSAEVHICNPPDEFIPIEISIQGHETRNSYCPGIPFFTAPELKRSEVSSTPECSYPEFIEEYCLSEPRTLSESSLCQPMLRDSTKSRNEDLGEEINGWYGNMSLTIVENHIDESCISEQSVEEDLSSSESRKIFSFGKAAGCVHFTNIDISWRMYAGSDWNGNGENEKQTIKFCKRDVNACLELALAGIQVQYDIFLDGGLCASRLSLSVQDFHLYDKSKDAPWKLVIGYYNSKDHPRESSSKAFKMELEAIRPDPLTPLEEYRLHVSFLPILLHLHQQQLDFLINFFGEKSASKDQSSSHLQSSDNLKSFPVACRSLAGHTIVEEALLPYFQASYDFKFDVRPSVVRVDYSPSHLDLAALRGGKYVELVNLVPWKGVELQLKHVHAVGIYGWSNVCEAIIGEWLEDISHNQIHKILGGLPTIRSLAAVGAGASKLVSLPVESYRKDKRVLKGMQRGTIAFLKSISLEAVGLGVHLAAGAHDILVQAEYIVTSSPSVNVRSKAKANARSNQPKDAQEGIQKACESLSDGLGKSTSALVRTPLKKYQSGAGAGSALVTAVRALPTAAIAPASACASALHYAFLGFRNRCTVIDIIIPFRNQAQGINLSRMYRSLAIVFSFVFFALVESPLRIVSLFQPFSVPFTSLLVRSSAPPPRVVRVFVFIASTALHSAINLLCIVSLCLYCYSALVDRFASEKFSLLESAMQMLDEILLLLVHHVMSSLDLNRGRGFRVPLPDSSSPPIERNRERQTARRNAGEARRGEAASDNEDSNLRLRSDEERSHLVSGRELPIPSDAGDRTAQPERVPPIPANGRYRIRDDSSEAEPFSISGDEQTSILFGGDRMKDSGGMTSGDGSSGSDSGENKTLSFVLFKWVLTTMACVLSFMRRLRDGLASPFDTFCCVKVDCLTSTTDRGIVTCPQVESPENRKQYGRVMTPPRVESP 2284
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 24948720 24977914 + BLOR07133 Blo15g00739 71139

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00739 2284 PANTHER AUTOPHAGY-RELATED 2, ISOFORM A 13 1928 IPR026849 GO:0006914
Blo15g00739 2284 MobiDBLite consensus disorder prediction 2075 2204 - -
Blo15g00739 2284 MobiDBLite consensus disorder prediction 2083 2127 - -
Blo15g00739 2284 Pfam N-terminal region of Chorein or VPS13 19 127 IPR026854 -
Blo15g00739 2284 MobiDBLite consensus disorder prediction 128 153 - -
Blo15g00739 2284 Pfam Autophagy-related protein C terminal domain 1849 1929 IPR015412 -
Blo15g00739 2284 PANTHER AUTOPHAGY-RELATED 2, ISOFORM A 13 1928 IPR026886 GO:0006914|GO:0030242
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00739 K17906 ATG2; autophagy-related protein 2 - jre:108981416 1851.64
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo15g00739 Blo-Chr15:24948720 Blo18g00247 Blo-Chr18:2552074 1.69E-26 dispersed
Blo15g00739 Blo-Chr15:24948720 Blo19g00072 Blo-Chr19:1770786 1.62E-51 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g429 . Blo15g00739 Bda06g01058 . Bpe07g00391 . . Bma12g00463 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cpe01g00444 . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008445 2 5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo15g00739 Blo_Chr15 FPKM 11.799105 12.914027 27.088917 29.420166 4.162375 4.649025 4.074732 16.255945 16.421898 17.170399