Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00751 ATGACGCGACGTACCATCAAGAAAATCTCACCGAGGCTGGAAATCGACAAAAAAATGACAGAGAAAGATGGTGAAGAGCTGAGCGTGAAAATCGACTGGTTAGGGTTTGCAGCAACAAATCCCGACGACTTGACAATGGGCAACTCAGTGAGAGGAGGCTGGCGTCGGTCTGAGGTGGAGAAAGAAGGTGGAGGAAAAAGTTTTCACTTCCGATCTAACCAACAAAAGGACGAGGGCTTTTATCTCGTTGTTATTCGACAAGTCTTGACTGCCATGCGAAGAGCTGAAAACTTAGCAGCAGAGGATCATATGCTCTTTGACCCATTCGTATACCATGGTATGGCTGAGATTCATGATAGGCATAGGGATATGCGCCTCGATGTTGACAACATGTCGTATGAGGAACTACTGGCATTGGAAGATCGCATTGGAGATGTTAGCACCGGAGTTAGTGAAGATATGATTTTAAAGCTAATGAAACAACAGAAATATGAGTCAATCAAAACCCCAACTCCCCCAGATTTGGAACCTTGCTGCATCTGTAAGGAGGATTATGCTGATGCAGATATTATTGGGACATTAGATTGTGGGCACAATTTCCATACCAACTGCATTAAGCAGTGGCTGGTGCTGAAGAATCTGTGTCCCATTTGTAAAACAACAGCCTTGGTATCATGA 678 44.4 MTRRTIKKISPRLEIDKKMTEKDGEELSVKIDWLGFAATNPDDLTMGNSVRGGWRRSEVEKEGGGKSFHFRSNQQKDEGFYLVVIRQVLTAMRRAENLAAEDHMLFDPFVYHGMAEIHDRHRDMRLDVDNMSYEELLALEDRIGDVSTGVSEDMILKLMKQQKYESIKTPTPPDLEPCCICKEDYADADIIGTLDCGHNFHTNCIKQWLVLKNLCPICKTTALVS 225
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 25503272 25505733 - BLOR07145 Blo15g00751 71151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00751 225 Pfam Ring finger domain 178 219 IPR001841 -
Blo15g00751 225 CDD RING-H2_TTC3 177 219 - -
Blo15g00751 225 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 141 223 IPR013083 -
Blo15g00751 225 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 91 224 IPR045191 GO:0061630
Blo15g00751 225 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 91 224 - -
Blo15g00751 225 SUPERFAMILY RING/U-box 177 222 - -
Blo15g00751 225 ProSiteProfiles Zinc finger RING-type profile. 178 219 IPR001841 -
Blo15g00751 225 SMART ring_2 178 218 IPR001841 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo02g00829 Blo15g00751 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo15g00751 Blo-Chr15:25503272 Blo17g00874 Blo-Chr17:28800371 7.95E-56 dispersed
Blo15g00751 Blo-Chr15:25503272 Blo02g00829 Blo-Chr2:29905024 2.22E-92 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00751 - K19041 tcc:18607956 247.669