Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo15g00751 | ATGACGCGACGTACCATCAAGAAAATCTCACCGAGGCTGGAAATCGACAAAAAAATGACAGAGAAAGATGGTGAAGAGCTGAGCGTGAAAATCGACTGGTTAGGGTTTGCAGCAACAAATCCCGACGACTTGACAATGGGCAACTCAGTGAGAGGAGGCTGGCGTCGGTCTGAGGTGGAGAAAGAAGGTGGAGGAAAAAGTTTTCACTTCCGATCTAACCAACAAAAGGACGAGGGCTTTTATCTCGTTGTTATTCGACAAGTCTTGACTGCCATGCGAAGAGCTGAAAACTTAGCAGCAGAGGATCATATGCTCTTTGACCCATTCGTATACCATGGTATGGCTGAGATTCATGATAGGCATAGGGATATGCGCCTCGATGTTGACAACATGTCGTATGAGGAACTACTGGCATTGGAAGATCGCATTGGAGATGTTAGCACCGGAGTTAGTGAAGATATGATTTTAAAGCTAATGAAACAACAGAAATATGAGTCAATCAAAACCCCAACTCCCCCAGATTTGGAACCTTGCTGCATCTGTAAGGAGGATTATGCTGATGCAGATATTATTGGGACATTAGATTGTGGGCACAATTTCCATACCAACTGCATTAAGCAGTGGCTGGTGCTGAAGAATCTGTGTCCCATTTGTAAAACAACAGCCTTGGTATCATGA | 678 | 44.4 | MTRRTIKKISPRLEIDKKMTEKDGEELSVKIDWLGFAATNPDDLTMGNSVRGGWRRSEVEKEGGGKSFHFRSNQQKDEGFYLVVIRQVLTAMRRAENLAAEDHMLFDPFVYHGMAEIHDRHRDMRLDVDNMSYEELLALEDRIGDVSTGVSEDMILKLMKQQKYESIKTPTPPDLEPCCICKEDYADADIIGTLDCGHNFHTNCIKQWLVLKNLCPICKTTALVS | 225 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 25503272 | 25505733 | - | BLOR07145 | Blo15g00751 | 71151 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo15g00751 | 225 | Pfam | Ring finger domain | 178 | 219 | IPR001841 | - | |
Blo15g00751 | 225 | CDD | RING-H2_TTC3 | 177 | 219 | - | - | |
Blo15g00751 | 225 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 141 | 223 | IPR013083 | - | |
Blo15g00751 | 225 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF165 | 91 | 224 | IPR045191 | GO:0061630 | |
Blo15g00751 | 225 | PANTHER | ZINC FINGER PROTEIN, PUTATIVE-RELATED | 91 | 224 | - | - | |
Blo15g00751 | 225 | SUPERFAMILY | RING/U-box | 177 | 222 | - | - | |
Blo15g00751 | 225 | ProSiteProfiles | Zinc finger RING-type profile. | 178 | 219 | IPR001841 | - | |
Blo15g00751 | 225 | SMART | ring_2 | 178 | 218 | IPR001841 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Blo02g00829 | Blo15g00751 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo15g00751 | Blo-Chr15:25503272 | Blo17g00874 | Blo-Chr17:28800371 | 7.95E-56 | dispersed | |
Blo15g00751 | Blo-Chr15:25503272 | Blo02g00829 | Blo-Chr2:29905024 | 2.22E-92 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo15g00751 | - | K19041 | tcc:18607956 | 247.669 |