Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00756 ATGGGAAGCACACCAGCTCAAATCCCAACTAGTTTTGGCCATGAACTCAGGGCCTGCCTCCGTTGTCGTCTCGTCAAAACCTACGATCAGTTCAGAGAATCAGGGTGTGAGAACTGCCCCTTCTTCAAGATGGACGAGGATCAAGAACGCGTTGTTGAGTGCACTACTCCCAATTTTAACGGTATAATTTCAGTAATGGACCCGAGTAGAAGTTGGGCAGCTCGGTGGCTACGGATCGGAAGATTCGTCCCTGGTTGTTACACTCTTGCAGTCTCGGAGGCTCTTCCAGAGGACTTGCAGAACTTGTGCGAAGATGAGCGCGTGCAGTATGTACCTCCAAAACGAGAACAGTCATCAAACTTATGCGACCCTTTATGTTCGGCTGACGAAACAAACTCGCAGAATTTTGAAGCAAATTACCAGCCAAATACTGATTTTTTAAAAGCTCTTACAATATTTGCAGCAGCTGCGACTGGGGCAGCCACAATTAACCATTCCTGGGTTGCTTCCAATCAGGATCTTGCAATGGCAATATTGTTTGGAATAGGATATGCAGGGATCATATTTGAGGAGTCTCTGGCCTTCAACAAGAGTGGAGTAGGATTGCTGATGGCTGTGAGCTTATGGGTTATCCGCAGTATCGGTGCTCCATCCAATGATGTAGTTCTTGCAGAGCTATCACATGCATCTGCGGAAGTCAGTGAAATTGTATTTTTCTTGCTTGGTGCGATGACCATAGTGGAGATTGTTGATGCTCATCAAGGGTTTAAGTTGGTGACAGACAATATTACCACTCGCAACCCTCGAACTCTCCTTTGGGTGGTTGGATTTGTGACCTTTTTTCTTAGCTCAATTTTAGACAACCTGACATCCACTATTGTCATGGTTTCTTTGTTGCGGAAACTAGTGCCTCCATCAGAGTATCGCAAACTTCTTGGAGGTGTTGTGGTTATAGCAGCAAATGCGGGGGGTGCATGGACGCCAATTGGAGATGTGACCACTACCATGTTATGGATAAATGGTCAAATATCCTCAGTGCAGACAATGAAGGGGTTGGTCATACCTTCTGTTATTTCTCTGGCAGTCCCACTAGCTCTTTTCTCTCGTACTAGTGAAGTAAATGGAAAGGGACAGGACTCTCCGAATGTTTTGGCATCTGAGCAGATGGCTCCTAGAGGGCAACTGGTTTTCTCAGTAGGCATTGGAGCTCTCATTTTTGTTCCGGTGTTCAAGGCCCTCACGGGTTTGCCGCCATACATGGGTATGTTGCTTGGACTTGGAGTGCTTTGGATTCTCACTGATGCTATTCACTTTGGCGAATCTGAAAGACAAAAGTTAAAAGTGCCACAAGCTTTGTCACGTATCGACACTCAAGGAGTGCTTTTCTTCCTTGGAATCCTTTTATCTGTTAGCTGTTTGGAGGCAGCTGGGATTCTTCGAGAATTAGCAAATTACCTTGATGCTCATATTCCTAATATCGAATTGATTGCAAGTACAATAGGGGTTGTATCGGCAGTAATAGATAATGTGCCACTCGTCGCAGCCACGATGGGAATGTACGATCTCTCGACATTTCCTAAGGACTCTGAGTTTTGGCAATTGGTGGCATTTTGTGCCGGCACGGGTGGATCCATGCTCTTGATTGGATCTGCAGCTGGAGTAGCATTCATGGGGATGGAGAAGGTTGACTTCTTATGGTACTTCAAGAAGGTGAGTGGTTTCGCTTTTGCAGGTTATGTAGCCGGAATTGCTGCCTATTTAGCCCTTCACAACTTTGACATCTCTCTCCCTAAAACTCTTGCTGAATTGACTTTCATTTCTGGTTCATAA 1830 45.57 MGSTPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDQERVVECTTPNFNGIISVMDPSRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVPPKREQSSNLCDPLCSADETNSQNFEANYQPNTDFLKALTIFAAAATGAATINHSWVASNQDLAMAILFGIGYAGIIFEESLAFNKSGVGLLMAVSLWVIRSIGAPSNDVVLAELSHASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITTRNPRTLLWVVGFVTFFLSSILDNLTSTIVMVSLLRKLVPPSEYRKLLGGVVVIAANAGGAWTPIGDVTTTMLWINGQISSVQTMKGLVIPSVISLAVPLALFSRTSEVNGKGQDSPNVLASEQMAPRGQLVFSVGIGALIFVPVFKALTGLPPYMGMLLGLGVLWILTDAIHFGESERQKLKVPQALSRIDTQGVLFFLGILLSVSCLEAAGILRELANYLDAHIPNIELIASTIGVVSAVIDNVPLVAATMGMYDLSTFPKDSEFWQLVAFCAGTGGSMLLIGSAAGVAFMGMEKVDFLWYFKKVSGFAFAGYVAGIAAYLALHNFDISLPKTLAELTFISGS 609
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 25683333 25698131 + BLOR07150 Blo15g00756 71156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00756 609 SUPERFAMILY RNA polymerase subunits 12 91 IPR029040 -
Blo15g00756 609 CDD P_permease 180 588 - -
Blo15g00756 609 SMART Spt4_2 16 92 IPR022800 -
Blo15g00756 609 Pfam Spt4/RpoE2 zinc finger 16 92 IPR022800 -
Blo15g00756 609 Pfam Citrate transporter 185 540 IPR004680 GO:0016021|GO:0055085
Blo15g00756 609 CDD Spt4 14 110 IPR022800 -
Blo15g00756 609 Gene3D - 14 120 IPR038510 -
Blo15g00756 609 PANTHER BNAC03G40960D PROTEIN 120 609 - -
Blo15g00756 609 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 120 609 IPR045016 GO:0006814|GO:0015297
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo15g00756 Blo-Chr15:25683333 Blo02g00839 Blo-Chr2:31010493 1.42E-115 wgd
Blo15g00756 Blo-Chr15:25683333 Blo02g00824 Blo-Chr2:29542115 8.98E-87 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00756 - - pop:7457553 815.839